cluster # 6279

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Oryza sativa
cluster # 6279 cluster # 6279 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6279#0 length = 1328 sequences # 4
consensusID : consensus_6279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1328
fasta sequence
                              [CGCCGCAAGTACTGTTTTTACTTCCAAGGCCAGTACACGACTTCATGATGGCTGGTGCTGCCAATGATGAGTGGCGTGGAGTATTATTTCATTGCTTTGATTCTGCTGGCGCTTTGGAATATTCTATGGCAAATGCGGGTTCTAGGTTCTCTTTTGCTACTGAAGTATGTGCCAAACTAATGAACGGAGCAAGATATGCAGTTGCTGATCCCCCATTGGACTCCGAGGACCACAAAGAGTTTGAAAATATCGTAGTCTCTGATGCGGTGCTAAATGTGATGATGATCAACAATGGAGCT-GATGCAACTGGTTGGCGTTTCTATACTGATGACGATTTGACCAGGACACCAGAGAACAATGTG-CAATCGCTTGTCTTGCCTAATGGCATTGCATTGCCTACTTTCGAGATC-ATGGTGGGATTCGATTCAGACGCCGTGTCGTCTTGCCGCCGGTGCTTATGGAAGAAGATGGGGTAATATATCATTTCCTGCAGTACAAATCCCTACCAAACGTTAGAGCCACTGTTAGGGCTAGCATTCTGTCAGGCCTTGCTCATGGTGAAGCTCTCGAAGAACTAGCCATAGATGCTCGGGCCCAACACTTTGCAGCCATTGCTGGTCCTGAAGGACATGATCTAGACCCTGAACAGTGGGCTGCTCTTCTCTTGCCTGAGCCAGCAGATGGAGGGGAGGGGCACTTGGATGGTGAAGCTGCTGTAGGAGGGGAGGGGCAGTTGGACGGTGAAGCTGCTGTAGAGGTAGGGGAGGAGGTTCTTGAGGTGGCTGTGGAGGTAGGGGACGAGGTGGTTCTTCCAGCCCTTTATGGATTTGTCGATGATGATGAGTATCGGTCTACCGAAGATGATGACTATGTTCCGGATGAAGAGGAGTCTCATTCTTCGGATGATGATTTTGTTCCAGATGAAAGTGATGATGACTATGTGCCACATCATGAGGGGTACGAATCAAGTGATTAAGACTGCCTGAAAAAATTAGTAGTGTGAATATCCCAAAGATAGCGTGGCAAAACTTTTTGAGTCCCGCATGGCAAGATATTTTGAGTAGGAATACGATACCGTAGTGCCAAGATGTTTTCAGCTGCCAGTAAGTAGTGGTAACAGAATTTGTTTAAAGATGTTCTCTCAGCGACCAGTAAGTATTGGTAACAATCTGTTTAAAGATGTTCTTTCAGCTACCAGTAAGTAGTGGTATCAGAATCTGTTTAGTCATCATGTATTATGATAACCTAGTCATCATATATTATGAGAACCTCTGGCCTAAGAAGAGACTAGTTGCACTCTGTTTTGAAGTGCTGTTTTGAAAAAAAAA]

[+] EMBL CF314071             [CGCCGCAAGTACTGTTTTTACTTCCAAGGCCAGTACACGACTTCATGATGGCTGGTGCTGCCAATGATGAGTGGCGTGGAGTATTATTTCATTGCTTTGATTCTGCTGGCGCTTTGGAATATTCTATGGCAAATGCGGGTTCTAGGTTCTCTTTTGCTACTGAAGTATGTGCCAAACTAATGAACGGAGCAAGATATGCAGTTGCTGATCCCCCATTGGACTCCGAGGACCACAAAGAGTTTGAAAATATCGTAGTCTCTGATGCGGTGCTAAATGTGATGATGATCAACAATGGAGCTNGATGCAACTGGTTGGCGTTTCTATACTGATGACGATTTGACCAGGACACCAGAGAACAATGTGNCAATCGCTTGTCTTGCCTAATGGCATTGCATTGCCTACTTTCGAGATC ATGGTGGGATTCGATTCAGACGCCGTGTCGTCTTGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF323638             [                        CAAGGCCAGTACACGACTTCATGATGGCTGGTGCTGCCAATGATGAGTGGCGTGGAGTATTATTTCATTGCTTTGATTCTGCTGGCGCTTTGGAATATTCTATGGCAAATGCGGGTTCTAGGTTCTCTTTTGCTACTGAAGTATGTGCCAAACTAATGAACGGAGCAAGATATGCAGTTGCTGATCCCCCATTGGACTCCGAGGACCACAAAGAGTTTGAAAATATCGTAGTCTCTGATGCGGTGCTAAATGTGATGATGATCAACAATGGAGCT GATGCAACTGGTTGGCGTTTCTATACTGATGACGATTTGACCAGGACACCAGAGAACAATGTG CAATCGCTTGTCTTGCCTAATGGCATTGCATTGCCTACTTTCGAGATCAATGGTGGGATTCGATTCAGACGCCGTGTCGTCTTGCCGCCGGTGCTTATGGAAGAAGATGGGGTAATATATCATTTCCTGCAGTACAAATCCCTACCAAACGTTAGAGCCACTGTTAGGGCTAGCATTCTGTCAGGCCTTGCTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA754071             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTCGTCTTGCCGCCGGTGCTTATGGAAGAAGATGGGGTAATATATCATTTCCTGCAGTACAAATCCCTACCAAACGTTAGAGCCACTGTTAGGGCTAGCATTCTGTCAGGCCTTGCTCATGGTGAAGCTCTCGAAGAACTAGCCATAGATGCTCGGGCCCAACACTTTGCAGCCATTGCTGGTCCTGAAGGACATGATCTAGACCCTGAACAGTGGGCTGCTCTTCTCTTGCCTGAGCCAGCAGATGGAGGGGAGGGGCACTTGGATGGTGAAGCTGCTGTAGGAGGGGAGGGGCAGTTGGACGGTGAAGCTGCTGTAGAGGTAGGGGAGGAGGTTCTTGAGGTGGCTGTGGAGGTAGGGGACGAGGTGGTTCTTCCAGCCCTTTATGGATTTGTCGATGATGATGAGTATCGGTCTACCGAAGATGATGACTATGTTCCGGATGAAGAGGAGTCTCATTCTTCGGATGATGATTTTGTTCCAGATGAAAGTGATGATGACTATGTGCCACATCATGAGGGGTACGAATCAAGTGATTAAGACTGCCTGAAAAAATTAGTAGTGTGAATATCCCAAAGATAGCGTGGCAAAACTTTTTGAGTCCCGCATGGCA                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF314072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGTCGATGATGATGAGTATCGGTCTACCGAAGATGATGACTATGTTCCGGATGAAGAGGAGTCTCATTCTTCGGATGATGATTTTGTTCCAGATGAAAGTGATGATGACTATGTGCCACATCATGAGGGGTACGAATCAAGTGATTAAGACTGCCTGAAAAGATTAGTAGTGTGAATATCCAGAAG TAGTGTGG AAAATCTTTTGAGT CCGGATGGGAAGATATTTTGAGTAGGAATACGATACCGTAGTGCCAAGATGTTTTCAGCTGCCAGTAAGTAGTGGTAACAGAATTTGTTTAAAGATGTTCTCTCAGCGACCAGTAAGTATTGGTAACAATCTGTTTAAAGATGTTCTTTCAGCTACCAGTAAGTAGTGGTATCAGAATCTGTTTAGTCATCATGTATTATGATAACCTAGTCATCATATATTATGAGAACCTCTGGCCTAAGAAGAGACTAGTTGCACTCTGTTTTGAAGTGCTGTTTTGAAAAAAAAA]




>consensus_6279#0
CGCCGCAAGTACTGTTTTTACTTCCAAGGCCAGTACACGACTTCATGATGGCTGGTGCTG
CCAATGATGAGTGGCGTGGAGTATTATTTCATTGCTTTGATTCTGCTGGCGCTTTGGAAT
ATTCTATGGCAAATGCGGGTTCTAGGTTCTCTTTTGCTACTGAAGTATGTGCCAAACTAA
TGAACGGAGCAAGATATGCAGTTGCTGATCCCCCATTGGACTCCGAGGACCACAAAGAGT
TTGAAAATATCGTAGTCTCTGATGCGGTGCTAAATGTGATGATGATCAACAATGGAGCTG
ATGCAACTGGTTGGCGTTTCTATACTGATGACGATTTGACCAGGACACCAGAGAACAATG
TGCAATCGCTTGTCTTGCCTAATGGCATTGCATTGCCTACTTTCGAGATCATGGTGGGAT
TCGATTCAGACGCCGTGTCGTCTTGCCGCCGGTGCTTATGGAAGAAGATGGGGTAATATA
TCATTTCCTGCAGTACAAATCCCTACCAAACGTTAGAGCCACTGTTAGGGCTAGCATTCT
GTCAGGCCTTGCTCATGGTGAAGCTCTCGAAGAACTAGCCATAGATGCTCGGGCCCAACA
CTTTGCAGCCATTGCTGGTCCTGAAGGACATGATCTAGACCCTGAACAGTGGGCTGCTCT
TCTCTTGCCTGAGCCAGCAGATGGAGGGGAGGGGCACTTGGATGGTGAAGCTGCTGTAGG
AGGGGAGGGGCAGTTGGACGGTGAAGCTGCTGTAGAGGTAGGGGAGGAGGTTCTTGAGGT
GGCTGTGGAGGTAGGGGACGAGGTGGTTCTTCCAGCCCTTTATGGATTTGTCGATGATGA
TGAGTATCGGTCTACCGAAGATGATGACTATGTTCCGGATGAAGAGGAGTCTCATTCTTC
GGATGATGATTTTGTTCCAGATGAAAGTGATGATGACTATGTGCCACATCATGAGGGGTA
CGAATCAAGTGATTAAGACTGCCTGAAAAAATTAGTAGTGTGAATATCCCAAAGATAGCG
TGGCAAAACTTTTTGAGTCCCGCATGGCAAGATATTTTGAGTAGGAATACGATACCGTAG
TGCCAAGATGTTTTCAGCTGCCAGTAAGTAGTGGTAACAGAATTTGTTTAAAGATGTTCT
CTCAGCGACCAGTAAGTATTGGTAACAATCTGTTTAAAGATGTTCTTTCAGCTACCAGTA
AGTAGTGGTATCAGAATCTGTTTAGTCATCATGTATTATGATAACCTAGTCATCATATAT
TATGAGAACCTCTGGCCTAAGAAGAGACTAGTTGCACTCTGTTTTGAAGTGCTGTTTTGA
AAAAAAAA
clustalw multiple alignements is not computed in this case