cluster # 6285

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Oryza sativa
cluster # 6285 cluster # 6285 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6285#0 length = 1602 sequences # 4
consensusID : consensus_6285#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1602
fasta sequence
                              [CGTATTGAACTCTTCTCAGCTCAAAGCCTTACACCACAACACGCAGCTGTTCTCGCTGGGCTTCTCTTCTTGCGCTGCGGTGATCGATCGANAGCTTGGGATGGCGCTGCTGGCGCGGAGGGCGCGGAAGGCGGTGATGGCGAAGGNGCCGGCGCCGCTGCTGCAGAAGAGGGGTGGCGGCGCGGCGGCGGA-NTGGCGATCCCGGCGCACTTCCGGTGCCCGATCTCGCTGGACCTNATGCGCGACCCGGTGACGGCGCCGACGGGGATCACGTACGACAGGGAGGGGATCGAGGCGTGGCTNGACACCGGGCGCGCGGTGTGCCCCGTCACCCACGCGCCGCTCCGGCACGAGGACCTCGTCCCCAACCACGCCATCCGCCGCGTCATCCAGGACTGGTGCGTCGCCAACCGGTCCCGCGGCGTGGAGCGCATCCCCACGCCCAAGATCCCCGTCACGCCCGTGCAGGCCTCCGAGCTGCTGTTCGACGTCGCGGAGTCGGCGGCGCGGCGCGGCGCGGCGGGGCGCGCCGCCGGGGCGGTCGCCAGGGTCCGGGCGCTCGCGAGGGACAGCGAGCGGAACCGGCGGTGCTTCGTGTCCGTCGGCACGGGGCGCGTGCTGGCCGCGGCGTTCGAGTCTCTCGCCGCCGCCGGGGAGGCGGGCGTTCTCGAGGACGTCCTGGCGGCATTGGTCTGCATGATGCCGTTGGACGAGGAGGCGGCCAGGGTCTTGGCCTCGTCTAGCTCGATGGGTTCACTCGTCGCCATTGCCAAGCACGGGAGCTTGGCCGGAAGGCTGAACGCTGTGCTGGCGATCAAGGAGGCCGTGTCGCGGGACGGAGC-GTTCGTGGACCTG-GCGGATGA--CAAGGTCGAC-AAGGTC-GTCGACGCGCTGGTCG-TGATCATCAAGGCTCCGATCTGCCCGCAGG-CCACCAAGGCTGCCATGGTCGCCACC-TACCACCTGGCGAGCTCCGACGAGCGCGTCGCTGCGAGGGTAGCATCCACGGGGCTCGTCCCAACGCTCATCGAGGCCCTCGTAGACGCCGACAAGAGCGTGTCCGAGAAGGCCCTGGCGGTGCTCGACGCAATGCTCGCCTCGGAGGAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTCGCAATGCCGGCCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCGAGCTCGCCGTGTCGGCGATGTGG-CGGCTCGGCTGCAAGGCCTCCTCCGGCGACGA-GGAGGCCGCCGCGACGGGGTGCCTGGTCGAGGCGCTGCGTGTGGGCGCGTTCCAGA-AGCTTCTCCTCCTCCTGCAGGTGGGCTG-CAGGGACGCGACCAAGGAGAAGGCCACTGAGCTGCTCAAGATGCTCAACAAGCACAAAGGGTTGGGGGAGTGTGTCGACGCTGT-GGATTTCAGAGGGCTCAATAGGCTGTCATGAATTGAGATCAGTGTTCAGAATCATTGTAAAAATAGTTGCGAGCAGCTAGGAAATGCAGATTGTAAAAATAGTTGATGGGGATTTTTGCGGATGTGCTTTCCATGCTAGATTGTAAATCTAATTGCAAAAACAAGTTTCCTACTTTCCTCACTGTAAATAAAAAAA]

[+] EMBL C27098               [CGTATTGAACTCTTCTCAGCTCAAAGCCTTACACCACAACACGCAGCTGTTCTCGCTGGGCTTCTCTTCTTGCGCTGCGGTGATCGATCGANAGCTTGGGATGGCGCTGCTGGCGCGGAGGGCGCGGAAGGCGGTGATGGCGAAGGNGCCGGCGCCGCTGCTGCAGAAGAGGGGTGGCGGCGCGGCGGCGGA NTGGCGATCCCGGCGCACTTCCGGTGCCCGATCTCGCTGGACCTNATGCGCGACCCGGTGACGGCGCCGACGGGGATCACGTACGACAGGGAGGGGATCGAGGCGTGGCTNGACACCGGGCGCGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK109161             [          TCTTCTCAGCTCAAAGCCTTACACCACAACACGCAGCTGTTCTCGCTGGGCTTCTCTTCTTGCGCTGCGGTGATCGATCGAGAGCTTGGGATGGCGCTGCTGGCGCGGAGGGCGCGGAAGGCGGTGATGGCGAAGGCGCCGGCGCCGCTGCTGCAGAAGAGGGGTGGCGGCGCGGCGGCGGAGCTGGCGATCCCGGCGCACTTCCGGTGCCCGATCTCGCTGGACCTGATGCGCGACCCGGTGACGGCGCCGACGGGGATCACGTACGACAGGGAGGGGATCGAGGCGTGGCTGGACACCGGGCGCGCGGTGTGCCCCGTCACCCACGCGCCGCTCCGGCACGAGGACCTCGTCCCCAACCACGCCATCCGCCGCGTCATCCAGGACTGGTGCGTCGCCAACCGGTCCCGCGGCGTGGAGCGCATCCCCACGCCCAAGATCCCCGTCACGCCCGTGCAGGCCTCCGAGCTGCTGTTCGACGTCGCGGAGTCGGCGGCGCGGCGCGGCGCGGCGGGGCGCGCCGCCGGGGCGGTCGCCAGGGTCCGGGCGCTCGCGAGGGACAGCGAGCGGAACCGGCGGTGCTTCGTGTCCGTCGGCACGGGGCGCGTGCTGGCCGCGGCGTTCGAGTCTCTCGCCGCCGCCGGGGAGGCGGGCGTTCTCGAGGACGTCCTGGCGGCATTGGTCTGCATGATGCCGTTGGACGAGGAGGCGGCCAGGGTCTTGGCCTCGTCTAGCTCGATGGGTTCACTCGTCGCCATTGCCAAGCACGGGAGCTTGGCCGGAAGGCTGAACGCTGTGCTGGCGATCAAGGAGGCCGTGTCGCGGGACGGAGC GTTCGTGGACCTG GCGGATGA  CAAGGTCGAC AAGGTC GTCGACGCGCTGGTCG TGATCATCAAGGCTCCGATCTGCCCGCAGG CCACCAAGGCTGCCATGGTCGCCACC TACCACCTGGCGAGCTCCGACGAGCGCGTCGCTGCGAGGGTAGCATCCACGGGGCTCGTCCCAACGCTCATCGAGGCCCTCGTAGACGCCGACAAGAGCGTGTCCGAGAAGGCCCTGGCGGTGCTCGACGCAATGCTCGCCTCGGAGGAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTCGCAATGCCGGCCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCGAGCTCGCCGTGTCGGCGATGTGG CGGCTCGGCTGCAAGGCCTCCTCCGGCGACGA GGAGGCCGCCGCGACGGGGTGCCTGGTCGAGGCGCTGCGTGTGGGCGCGTTCCAGA AGCTTCTCCTCCTCCTGCAGGTGGGCTG CAGGGACGCGACCAAGGAGAAGGCCACTGAGCTGCTCAAGATGCTCAACAAGCACAAAGGGTTGGGGGAGTGTGTCGACGCTGT GGATTTCAGAGGGCTCAATAGGCTGTCATGAATTGAGATCAGTGTTCAGAATCATTGTAAAAATAGTTGCGAGCAGCTAGGAAATGCAGATTGTAAAAATAGTTGATGGGGATTTTTGCGGATGTGCTTTCCATGCTAGATTGTAAATCTAATTGCAAAAACAAGTTTCCTACTTTCCTCACTGTAAATA      ]
[+] EMBL BQ907174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctCGGCCCGGGGCTTTTCTTGACCCTGTCCGGATGACCCAGGGTCGACNAAGGTCTGTTGACGCGCTGGTCGTTGATCATCAA GCTCCGATCTGCCC CAGGCCCACCCAAGCTGCCAT GTCGCCACCTTACCACNTGGCGAGNTCCGACGAGCGCGTC C GCGAGGGTAGCATCCACGGGGCTCGTCCCAACGCTCATCGAGGCCCTCGTAGACGCCGAAAAGAGCGTGTCCGAGAAGGCCCTGGCGGTGTTCGACGCAATGCTCGCCTCGGAGGAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTCGCAATGCCGGCCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCGAGCTCGCCGTGTCGGCGATGTGGTCGGCTCGGCTGCAAGGCCTCCTCCGGCGACGATGGAGGCCGCCGCGACGGGGTGCCTGGTCGAGGCGCTGCGTGTGGGCGCGTTCCAGATAGCTTCTCCTCCTCCTGCAGGTGGGCTGCCAGGGACGCGACCAAGGAGAAGGCCACTGAGCTGCTCAAGATGCTCAACAAGCACAAAGGGTTGGGGGAGTGTGTCGACGCTGTCGGATTTCAGAGGGCTCAATAGGCTGTCATGAATTGAGATCAGTGTTCAGAATCATTGTAAAAATAGTTGCGAGCAGCTAGGAAATGCAGATTGTAAAAATAGTTGATGGGGATTTTTGCGGATGTGCTTTCCATGCTAGATTGTCCATCTAATTGCAAAAACAAGTTTCCTAaaaa                    ]
[+] EMBL AU166815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTCCGACGTGGCCACCGAGCTCGCCGTGTCGGCGATGTGG CGGCTCGGCTGCAAGGCCTCCTCCGGCGACGA GGAGGCCGCCGCGACGGGGTGCCTGGTCGAGGCGCTGCGTGTGGGCGCGTTCCAGA AGCTTCTCCTCCTCCTGCAGGTGGGCTG CAGGGACGCGACCAAGGAGAAGGCCACTGAGCTGCTCAAGATGCTCAACAAGCACAAAGGGTTGGGGGAGTGTGTCGACGCTGT GGATTTCAGAGGGCTCAATAGGCTGTCATGAATTGAGATCAGTGTTCAGAATCATTGTAAAAATAGTTGCGAGCAGCTAGGAAATGCAGATTGTAAAAATAGTTGATGGGGATTTTTGCGGATGTGCTTTCCATGCTAGATTGTAAATCTAATTGCAAAAACAAGTTTCCTACTTTCCTCACTGTAAAAAAAAAAA]




>consensus_6285#0
CGTATTGAACTCTTCTCAGCTCAAAGCCTTACACCACAACACGCAGCTGTTCTCGCTGGG
CTTCTCTTCTTGCGCTGCGGTGATCGATCGANAGCTTGGGATGGCGCTGCTGGCGCGGAG
GGCGCGGAAGGCGGTGATGGCGAAGGNGCCGGCGCCGCTGCTGCAGAAGAGGGGTGGCGG
CGCGGCGGCGGANTGGCGATCCCGGCGCACTTCCGGTGCCCGATCTCGCTGGACCTNATG
CGCGACCCGGTGACGGCGCCGACGGGGATCACGTACGACAGGGAGGGGATCGAGGCGTGG
CTNGACACCGGGCGCGCGGTGTGCCCCGTCACCCACGCGCCGCTCCGGCACGAGGACCTC
GTCCCCAACCACGCCATCCGCCGCGTCATCCAGGACTGGTGCGTCGCCAACCGGTCCCGC
GGCGTGGAGCGCATCCCCACGCCCAAGATCCCCGTCACGCCCGTGCAGGCCTCCGAGCTG
CTGTTCGACGTCGCGGAGTCGGCGGCGCGGCGCGGCGCGGCGGGGCGCGCCGCCGGGGCG
GTCGCCAGGGTCCGGGCGCTCGCGAGGGACAGCGAGCGGAACCGGCGGTGCTTCGTGTCC
GTCGGCACGGGGCGCGTGCTGGCCGCGGCGTTCGAGTCTCTCGCCGCCGCCGGGGAGGCG
GGCGTTCTCGAGGACGTCCTGGCGGCATTGGTCTGCATGATGCCGTTGGACGAGGAGGCG
GCCAGGGTCTTGGCCTCGTCTAGCTCGATGGGTTCACTCGTCGCCATTGCCAAGCACGGG
AGCTTGGCCGGAAGGCTGAACGCTGTGCTGGCGATCAAGGAGGCCGTGTCGCGGGACGGA
GCGTTCGTGGACCTGGCGGATGACAAGGTCGACAAGGTCGTCGACGCGCTGGTCGTGATC
ATCAAGGCTCCGATCTGCCCGCAGGCCACCAAGGCTGCCATGGTCGCCACCTACCACCTG
GCGAGCTCCGACGAGCGCGTCGCTGCGAGGGTAGCATCCACGGGGCTCGTCCCAACGCTC
ATCGAGGCCCTCGTAGACGCCGACAAGAGCGTGTCCGAGAAGGCCCTGGCGGTGCTCGAC
GCAATGCTCGCCTCGGAGGAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTCGCAATGCCG
GCCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCGAGCTCGCCGTGTCGGCG
ATGTGGCGGCTCGGCTGCAAGGCCTCCTCCGGCGACGAGGAGGCCGCCGCGACGGGGTGC
CTGGTCGAGGCGCTGCGTGTGGGCGCGTTCCAGAAGCTTCTCCTCCTCCTGCAGGTGGGC
TGCAGGGACGCGACCAAGGAGAAGGCCACTGAGCTGCTCAAGATGCTCAACAAGCACAAA
GGGTTGGGGGAGTGTGTCGACGCTGTGGATTTCAGAGGGCTCAATAGGCTGTCATGAATT
GAGATCAGTGTTCAGAATCATTGTAAAAATAGTTGCGAGCAGCTAGGAAATGCAGATTGT
AAAAATAGTTGATGGGGATTTTTGCGGATGTGCTTTCCATGCTAGATTGTAAATCTAATT
GCAAAAACAAGTTTCCTACTTTCCTCACTGTAAATAAAAAAA
clustalw multiple alignements is not computed in this case