These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6287#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2306 fasta sequence [AACTCCAAACCATTTCCTCCCCATCGCCGCCGCCGCCGCAGCTGAATCTTCCCGCGTGAAGCCTTCAACTCGGCTCGGGGATGGATTCCGACGCGGCACCGTCAGTGACGCCGGGGGCGGTGGCGTTCGTCCTGGAGAACGCGTCGCCGGACGCGGCCACCGGCGTGCCGGTGCCGGAGATCGTCCTCCAGGTCGTCGACCTCAAGCCCATCGGCACCCGCTTCACTTTCTTGGCGAGCGATGGCAAGGACAAGATAAAGACGATGCTTCTCACCCAGCTCGCTCCGGAGGTGCGCTCCGGCAACATCCAGAATCTCGGCGTCATCCGCGTCCTCGACTACACCTGCAACACCATCGGCGAAAAGCAGGAAAAGGTCTTGATTATCACGAAGCTCGAGGTCGTGTTCAAGGCGCTGGATTCCGAGATCAAGTGCGAGGCCGAAAAGCAAGAGGAGAAGCCGGCGATTCTGTTGAGTCCCAAGGAGGAATCCGTGGTTCTCTCCAAGCCCACGAACGCGCCGCCACTTCCTCCGGTTGTGCTGAAGCCCAAGCAGGAGGTGAAGTCCGCGTCCCAGATCGTGAACGAGCAGCGCGGCAATGCTGCTCCTGCGGCGCGGTTGGCCATGACGAGAAGAGTTCATCCTTTGATCTCCCTGAACCCCTACCAGGGCAACTGGATCATCAAGGTGCGTGTCACAAGCAAGGGCAACCTGAGGACGTACAAGAATGCTCGTGGTGAAGGCTGCGTCTTCAATGTGGAGCTCACTGATGTGGATGGCACCCAGATCCAGGCAACCATGTTCAACGAGGCTGCCAAGAAGTTCTATCCGATGTTTGAGCTGGGGAAGGTGTACTACATCTCCAAAGGATCTCTCAGAGTCGCCAACAAGCAGTTCAAGACTGTCCATAATGACTACGAGATGACCCTGAATGAGAATGCTGTTGTTGAGGAAGCTGAGGGCGAAACTTTTATCCCACAGATTCAGTACAACTTTGTCAAGATTGATCAGCTAGGGCCATATGTTGGTGGCAGGGAGCTAGTAGATGTTATTGGGGTTGTTCAGAGCGTATCTCCTACTCTTAGTGTTAGGAGGAAGATTGACAACGAGACGATTCCAAAGCGTGACATCGTTGTAGCGGATGACTCGAGCAAAACTGTAACCATATCTCTTTGGAATGATCTTGCCACAACTACTGGTCAGGAGCTCTTGGACATGGTAGACTCTGCGCCTATCATTGCGATAAAGAGCCTAAAAGTATCTGACTTCCAAGGTTTGTCTCTGTCAACTGTGGGGAGAAGTACAATTGTAGTGAATCCTGACTTGCCTGAGGCAGAACAGCTCAGAGCTTGGTATGACTCTGAAGGCAAGGGTACTTCAATGGCATCAATTGGTTCAGATATGGGCGCATCAAGGGTTGGTGGCGCGAGATCCATGTACAGTGATAGAGTTTTTCTGTCTCACATCACAAGTGACCCCAACTTGGGTCAGGATAAGCCTGTGTTCTTCAGTCTGAATGCCTATATTAGCCTTATCAAGCCTGACCAAACCATGTGGTACCGAGCTTGCAAGACCTGCAACAAGAAGGTGACTGAGGCAATTGGATCAGGATACTGGTGTGAAGGGTGCCAGAAGAATGATGCTGAGTGCTCACTGAGGTACATCATGGTCATCAAGGTCTCCGACCCTACTGGTGAGGCCTGGCTTTCTCTGTTCAATGATCAGGCAGAGAGGATTGTTGGCTGCAGTGCAGACGAGCTTGATCGGATTAGGAAGGAGGAGGGTGATGACAGTTACCTTCTCAAGCTGAAGGAAGCTACTTGGGTTCCTCACCTGTTCCGCGTCAGCGTAACTCAGAATGAGTACATGAATGAGAAGAGGCAGAGGATCACTGTGAGGAGTGAAGCTCCGGTAGACCACGCAGCTGAAGCCAAGTACATGCTCGAGGAGATAGCCAAGCTGACAGGTTGCTAGATGCAAAATTATCGGTGAAGCTTGAAGAGTCCATGAAAGCTTAGATGCAGTGTTTCGGTGAAGCTTTTGAAGTGCCTGTCCATGAAAGCTTTTGAGGTGTAATAGCTTTATAAATTATGGTTTCTCCACTGCAATTAGGTGCTAGCTAGTATTAGCCTTTTGTATTATAGGTAGATGCATGCTTAACTTGTTTTTGAGGCAACCAGAATGTGATGCTGTTATACAGCCGTTTTATCTTCAAATGTGATGGTTGCCTGGACAGATTGTGAAATTGATAATTGGAATCAGTAACTGGTTGATGTTAATTTCCTATAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK060582 [AACTCCAAACCATTTCCTCCCCATCGCCGCCGCCGCCGCAGCTGAATCTTCCCGCGTGAAGCCTTCAACTCGGCTCGGGGATGGATTCCGACGCGGCACCGTCAGTGACGCCGGGGGCGGTGGCGTTCGTCCTGGAGAACGCGTCGCCGGACGCGGCCACCGGCGTGCCGGTGCCGGAGATCGTCCTCCAGGTCGTCGACCTCAAGCCCATCGGCACCCGCTTCACTTTCTTGGCGAGCGATGGCAAGGACAAGATAAAGACGATGCTTCTCACCCAGCTCGCTCCGGAGGTGCGCTCCGGCAACATCCAGAATCTCGGCGTCATCCGCGTCCTCGACTACACCTGCAACACCATCGGCGAAAAGCAGGAAAAGGTCTTGATTATCACGAAGCTCGAGGTCGTGTTCAAGGCGCTGGATTCCGAGATCAAGTGCGAGGCCGAAAAGCAAGAGGAGAAGCCGGCGATTCTGTTGAGTCCCAAGGAGGAATCCGTGGTTCTCTCCAAGCCCACGAACGCGCCGCCACTTCCTCCGGTTGTGCTGAAGCCCAAGCAGGAGGTGAAGTCCGCGTCCCAGATCGTGAACGAGCAGCGCGGCAATGCTGCTCCTGCGGCGCGGTTGGCCATGACGAGAAGAGTTCATCCTTTGATCTCCCTGAACCCCTACCAGGGCAACTGGATCATCAAGGTGCGTGTCACAAGCAAGGGCAACCTGAGGACGTACAAGAATGCTCGTGGTGAAGGCTGCGTCTTCAATGTGGAGCTCACTGATGTGGATGGCACCCAGATCCAGGCAACCATGTTCAACGAGGCTGCCAAGAAGTTCTATCCGATGTTTGAGCTGGGGAAGGTGTACTACATCTCCAAAGGATCCCTCAGAGTCGCCAACAAGCAGTTCAAGACTGTCCATAATGACTACGAGATGACCCTGAATGAGAATGCTGTTGTTGAGGAAGCTGAGGGCGAAACTTTTATCCCACAGATTCAGTACAACTTTGTCAAGATTGATCAGCTAGGGCCATATGTTGGTGGCAGGGAGCTAGTAGATGTTATTGGGGTTGTTCAGAGCGTATCTCCTACTCTTAGTGTTAGGAGGAAGATTGACAACGAGACGATTCCAAAGCGTGACATCGTTGTAGCGGATGACTCGAGCAAAACTGTAACCATATCTCTTTGGAATGATCTTGCCACAACTACTGGTCAGGAGCTCTTGGACATGGTAGACTCTGCGCCTATCATTGCGATAAAGAGCCTAAAAGTATCTGACTTCCAAGGTTTGTCTCTGTCAACTGTGGGGAGAAGTACAATTGTAGTGAATCCTGACTTGCCTGAGGCAGAACAGCTCAGAGCTTGGTATGACTCTGAAGGCAAGGGTACTTCAATGGCATCAATTGGTTCAGATATGGGCGCATCAAGGGTTGGTGGCGCGAGATCCATGTACAGTGATGGAGTTTTTCTGTCTCACATCACAAGTGACCCCAACTTGGGTCAGGATAAGCCTGTGTTCTTCAGTCTGAATGCCTATATTAGCCTTATCAAGCCTGACCAAACCATGTGGTACCGAGCTTGCAAGACCTGCAACAAGAAGGTGACTGAGGCAATTGGATCAGGATACTGGTGTGAAGGGTGCCAGAAGAATGATGCTGAGTGCTCACTGAGGTACATCATGGTCATCAAGGTCTCCGACCCTACTGGTGAGGCCTGGCTTTCTCTGTTCAATGATCAGGCAGAGAGGATTGTTGGCTGCAGTGCAGATGAGCTTGATCGGATTAGGAAGGAGGAGGGTGATGACAGTTACCTTCTCAAGCTGAAGGAAGCTACTTGGGTTCCTCACCTGTTCCGCGTCAGCGTAACTCAGAATGAGTACATGAATGAGAAGAGGCAGAGGATCACTGTGAGGAGTGAAGCTCCGGTAGACCACGCAGCTGAAGCCAAGTACATGCTCGAGGAGATAGCCAAGCTGACAGGTTGCTAGATGCAAAATTATCGGTGAAGCTTGAAGAGTCCATGAAAGCTTAGATGCAGTGTTTCGGTGAAGCTTTTGAAGTGCCTGTCCATGAAAGCTTTTGAGGTGTAATAGCTTTATAAATTATGGTTTCTCCACTGCAATTAGGTGCTAGCTAGTATTAGCCTTTTGTATTATAGGTAGATGCATGCTTAACTTGTTTTTGAGGCAACCAGAATGTGATGCTGTTATACAGCCG ] [+] EMBL OSAF9179 [ CCGCAGCTGAATCTTCCCGCGTGAAGCCTTCAACTCGGCTCGGGGATGGATTCCGACGCGGCACCGTCAGTGACGCCGGGGGCGGTGGCGTTCGTCCTGGAGAACGCGTCGCCGGACGCGGCCACCGGCGTGCCGGTGCCGGAGATCGTCCTCCAGGTCGTCGACCTCAAGCCCATCGGCACCCGCTTCACTTTCTTGGCGAGCGATGGCAAGGACAAGATAAAGACGATGCTTCTCACCCAGCTCGCTCCGGAGGTGCGCTCCGGCAACATCCAGAATCTCGGCGTCATCCGCGTCCTCGACTACACCTGCAACACCATCGGCGAAAAGCAGGAAAAGGTCTTGATTATCACGAAGCTCGAGGTCGTGTTCAAGGCGCTGGATTCCGAGATCAAGTGCGAGGCCGAAAAGCAAGAGGAGAAGCCGGCGATTCTGTTGAGTCCCAAGGAGGAATCCGTGGTTCTCTCCAAGCCCACGAACGCGCCGCCACTTCCTCCGGTTGTGCTGAAGCCCAAGCAGGAGGTGAAGTCCGCGTCCCAGATCGTGAACGAGCAGCGCGGCAATGCTGCTCCTGCGGCGCGGTTGGCCATGACGAGAAGAGTTCATCCTTTGATCTCCCTGAACCCCTACCAGGGCAACTGGATCATCAAGGTGCGTGTCACAAGCAAGGGCAACCTGAGGACGTACAAGAATGCTCGTGGTGAAGGCTGCGTCTTCAATGTGGAGCTCACTGATGTGGATGGCACCCAGATCCAGGCAACCATGTTCAACGAGGCTGCCAAGAAGTTCTATCCGATGTTTGAGCTGGGGAAGGTGTACTACATCTCCAAAGGATCTCTCAGAGTCGCCAACAAGCAGTTCAAGACTGTCCATAATGACTACGAGATGACCCTGAATGAGAATGCTGTTGTTGAGGAAGCTGAGGGCGAAACTTTTATCCCACAGATTCAGTACAACTTTGTCAAGATTGATCAGCTAGGGCCATATGTTGGTGGCAGGGAGCTAGTAGATGTTATTGGGGTTGTTCAGAGCGTATCTCCTACTCTTAGTGTTAGGAGGAAGATTGACAACGAGACGATTCCAAAGCGTGACATCGTTGTAGCGGATGACTCGAGCAAAACTGTAACCATATCTCTTTGGAATGATCTTGCCACAACTACTGGTCAGGAGCTCTTGGACATGGTAGACTCTGCGCCTATCATTGCGATAAAGAGCCTAAAAGTATCTGACTTCCAAGGTTTGTCTCTGTCAACTGTGGGGAGAAGTACAATTGTAGTGAATCCTGACTTGCCTGAGGCAGAACAGCTCAGAGCTTGGTATGACTCTGAAGGCAAGGGTACTTCAATGGCATCAATTGGTTCAGATATGGGCGCATCAAGGGTTGGTGGCGCGAGATCCATGTACAGTGATAGAGTTTTTCTGTCTCACATCACAAGTGACCCCAACTTGGGTCAGGATAAGCCTGTGTTCTTCAGTCTGAATGCCTATATTAGCCTTATCAAGCCTGACCAAACCATGTGGTACCGAGCTTGCAAGACCTGCAACAAGAAGGTGACTGAGGCAATGGGATCAGGATACTGGTGTGAAGGGTGCCAGAAGAATGATGCTGAGTGCTCACTGAGGTACATCATGGTCATCAAGGTCTCCGACCCTACTGGTGAGGCCTGGCTTTCTCTGTTCAATGATCAGGCAGAGAGGATTGTTGGCTGCAGTGCAGACGAGCTTGATCGGATTAGGAAGGAGGAGGGTGATGACAGTTACCTTCTCAAGCTGAAGGAAGCTACTTGGGTTCCTCACCTGTTCCGCGTCAGCGTAACTCAGAATGAGTACATGAATGAGAAGAGGCAGAGGATCACTGTGAGGAGTGAAGCTCCGGTAGACCACGCAGCTGAAGCCAAGTACATGCTCGAGGAGATAGCCAAGCTGACAGGTTGCTAGATGCAAAATTATCGGTGAAGCTTGAAGAGTCCATGAAAGCTTAGATGCAGTGTTTCGGTGAAGCTTTTGAAGTGCCTGTCCATGAAAGCTTTTGAGGTGTAATAGCTTTATAAATTATGGTTTCTCCACTGCAATTAGGTGCTAGCTAGTATTAGCCTTTTGTATTATAGGTAGATGCATGCTTAACTTGTTTTTGAGGCAACCAGAATGTGATGCTGTTATACAGCCGTTTTATCTTCAAATGTGATGGTTGCCTGGACAGATTGTGAAATTGATAATTGGAATCAGTAACTGGTTGATGTTAATTTCCTATAAAA ] [+] EMBL AB111916 [ GGATTCCGACGCGGCACCGTCAGTGACGCCGGGGGCGGTGGCGTTCGTCCTGGAGAACGCGTCGCCGGACGCGGCCACCGGCGTGCCGGTGCCGGAGATCGTCCTCCAGGTCGTCGACCTCAAGCCCATCGGCACCCGCTTCACTTTCTTGGCGAGCGATGGCAAGGACAAGATAAAGACGATGCTTCTCACCCAGCTCGCTCCGGAGGTGCGCTCCGGCAACATCCAGAATCTCGGCGTCATCCGCGTCCTCGACTACACCTGCAACACCATCGGCGAAAAGCAGGAAAAGGTCTTGATTATCACGAAGCTCGAGGTCGTGTTCAAGGCGCTGGATTCCGAGATCAAGTGCGAGGCCGAAAAGCAAGAGGAGAAGCCGGCGATTCTGTTGAGTCCCAAGGAGGAATCAGTGGTTCTCTCCAAGCCCACGAACGCGCCGCCACTTCCTCCGGTTGTGCTGAAGCCCAAGCAGGAGGTGAAGTCCGCGTCCCAGATCGTGAACGAGCAGCGCGGCAATGCTGCTCCTGCGGCGCGGTTGGCCATGACGAGAAGAGTTCATCCTTTGATCTCCCTGAACCCCTACCAGGGCAACTGGATCATCAAGGTGCGTGTCACAAGCAAGGGCAACCTGAGGACGTACAAGAATGCTCGTGGTGAAGGCTGCGTCTTCAATGTGGAGCTCACTGATGTGGATGGCACCCAGATCCAGGCAACCATGTTCAACGAGGCTGCCAAGAAGTTCTATCCGATGTTTGAGCTGGGGAAGGTGTACTACATCTCCAAAGGATCTCTCAGAGTCGCCGACAAGCAGTTCAAGACTGTCCATAATGACTACGAGATGACCCTGAATGAGAATGCTGTTGTTGAGGAAGCTGAGGGCGAAACTTTTATCCCACAGATTCAGTACAACTTTGTCAAGATTGATCAGCTAGGGCCATATGTTGGTGGCAGGGAGCTAGTAGATGTTATTGGGGTTGTTCAGAGCGTATCTCCTACTCTTAGTGTTAGGAGGAAGATTGACAACGAGACGATTCCAAAGCGTGACATCGTTGTAGCGGATGACTCGAGCAAAACTGTAACCATATCTCTTTGGAATGATCTTGCCACAACTACTGGTCAGGAGCTCTTGGACATGGTAGACTCTGCGCCTATCATTGCGATAAAGAGCCTAAAAGTATCTGACTTCCAAGGTTTGTCTCTGTCAACTGTGGGGAGAAGTACAATTGTACTGAATCCTGACTTGCCTGAGGCAGAACAGCTCAGAGCTTGGTATGACTCTGAAGGCAAGGGTACTTCAATGGCATCAATTGGTTCAGATATGGGCGCATCAAGGGTTGGTGGCGCGAGATCCATGTACAGTGATAGAGTTTTTCTGTCTCACATCACAAGTGACCCCAACTTGGGTCAGGATAAGCCTGTGTTCTTCAGTCTGAATGCCTATATTAGCCTTATCAAGCCTGACCAAACCATGTGGTACCGAGCTTGCAAGACCTGCAACAAGAAGGTGACTGAGGCAATTGGATCAGGATACTGGTGTGAAGGGTGCCAGAAGAATGATGCTGAGTGCTCACTGAGGTACATCATGGTCATCAAGGTCTCCGACCCTACTGGTGAGGCCTGGCTTTCTCTGTTCAATGATCAGGCAGAGAGGATTGTTGGCTGCAGTGCAGACGAGCTTGATCGGATTAGGAAGGAGGAGGGTGATGACAGTTACCTTCTCAAGCTGAAGGAAGCTACTTGGGTTCCTCACCTGTTCCGCGTCAGCGTAACTCAGAATGAGTACATGAATGAGAAGAGGCAGAGGATCACTGTGAGGAGTGAAGCTCCGGTAGACCACGCAGCTGAAGCCAAGTACATGCTCGAGGAGATAGCCAAGCTGACAGGTTGCTAGATGCAAAATTATCGGTGA ] [-] EMBL CA762852 [ TGATGCTGAGTGCTCACTGAGGTACATCATGGTCATCAAGGTCTCCGACCCTACTGGTGAGGCCTGGCTTTCTCTGTTCAATGATCAGGCAGAGAGGATTGTTGGNTGCAGTGCAGACGAGCTTGATCGGATTAGGAAGGAGGAGGGTGATGACAGTTACCTTCTCAAGCTGAAGGAAGCTACTTGGGTTCCTCACCTGTTCCGCGTCAGCGTAACTCAGAATGAGTACATGAATGAGAAGAGGCAGAGGATCCCTGTGAGGAGTGAAGCTCCGGTAGACCACGCAGCTGAAGCCAAGTACATGCTCGAGGAGATAGCCAAGCTGACAGGTTGCTAGATGCAAAATTATCGGTGAAGCTTGAAGAGTCCATGAAAGCTTAGATGCAGTGTTTCGGTGAAGCTTTTGAAGTGCCTGTCCATGAAAGCTTTTGAGGTGTAATAGCTTTATAAATTATGGTTTCTCCCCTGCAATTAGGTGCTAGCTAGTATTAGCCTTTTGTATTATAGGTAGATGCATGCTTAACTTGTTTTTGAGGCAACCAGAATGTGATGCTGTTATACAGCCGTTTTATCTTCAAATGTGATGGTTGCCTGGACAGATTGTGAAATTGATAATTGGAATCAGTAACTGGTTGATGTTAATTTCCTATAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||