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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6301 cluster # 6301       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6301#0 length = 1011 sequences # 4  

consensusID : consensus_6301#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1011
fasta sequence
                              [AGTATATGTCTTTGGTGGACTAAGTGATGATGGCTTATGTTCTTGCATGAACATAATGGACACAGCAAGTATCCAATGGAATGTGATTTCTCCTGATGACAAATGGCCATGTGCTCGCCACTCGCATTCTCTAGTGTCCTATGGTTCAAAATTGTTTCTGTTTGGAGGTCATGATGGTCAGAGGGCACTGAATGATTTCTATAGTTTTGATACAACAACACTTAAGTGGAACAAAGAAAACACTAATGGGAAAGCTCCATCCCCTAGATTTTCACATTGCATGTTCATCTACAAAGACTATCTCGGCATACTTGGAGGTTGTCCTATTAGAGAAAGCAGTCAAGAAATTGCATTGCTAAATTTAAAGCATAAAATCTGGTTTTATGTATCCATTCCATCATTGAGCCAATGCCTTTGTGTCCGTAGCTCATCAGTCATCATTGATGATGATCTTGTCATTGTTGGTGGTGGTGCGTCTTGCTATGCATTTGGAACTAGATTCAGTCAGCCAATAAAAATTGATCTGCATTTGCTGGAGTCAATATTTAAGCTTGCATACAACAAGGAAAAAGAAATGTCTGTACAACACGGTTCAGTGTCGAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGTGGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTATGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGTTCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCTAATCACTGATAAGCATCTCAAGGTACAACCTGATGATTCATGTGTTTTTGAAGAACTATTGCCGTTTTCTGAAAATAAGCTTTTTGGGGCCAGCATTTCTCTTCAGAAAGCACTAGAAATTTTGTTGTTATGCCCGTGGTTCCATTCTGAAAGATGAAGTAGCGATCAGCC]

[+] EMBL CB662741             [AGTATATGTCTTTGGTGGACTAAGTGATGATGGCTTATGTTCTTGCATGAACATAATGGACACAGCAAGTATCCAATGGAATGTGATTTCTCCTGATGACAAATGGCCATGTGCTCGCCACTCGCATTCTCTAGTGTCCTATGGTTCAAAATTGTTTCTGTTTGGAGGTCATGATGGTCAGAGGGCACTGAATGATTTCTATAGTTTTGATACAACAACACTTAAGTGGAACAAAGAAAACACTAATGGGAAAGCTCCATCCCCTAGATTTTCACATTGCATGTTCATCTACAAAGACTATCTCGGCATACTTGGAGGTTGTCCTATTAGAGAAAGCAGTCAAGAAATTGCATTGCTAAATTTAAAGCATAAAATCTGGTTTTATGTATCCATTCCATCATTGAGCCAATGCCTTTGTGTCCGTAGCTCATCAGTCATCATTGATGATGATCTTGTCATTGTTGGTGGTGGTGCGTCTTGCTATGCATTTGGAACTAGATTCAGTCAGCCAATAAAAATTGATCTGCATTTGCTGGAGTCAATATTTAAGCTTGCATACAACAAGGAAAAAGAAATGTCTGTACAACACGGTTCAGTGTCGAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGTGGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTATGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGTTCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCTAATCACTGATAAGCATCTCAAAGTACAACCT                                                                                                                                            ]
[+] EMBL CF324386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGCATACAACAAGGAAAAAGAAATGTCTGTACAACACGGTTCAGTGTCGAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGTGGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTATGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGTTCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCTAATCACTGATAAGCATCTCAAGGTACAACCTGATGATTCATGTGTTTTTGAAGAACTATTGCCGTTTTCTGAAAATAAGCTTTTTGGGGCCAGCATTTCTCTTCAGAAAGCACTAGAAATTTTGTTGTTATGCCCGTGGTTCCATTCTGAAAGATGAAGTAGCGATCAGCC]
[+] EMBL CF324510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGCATACAACAAGGAAAAAGAAATGTCTGTACAACACGGTTCAGTGTCGAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGTGGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTATGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGTTCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCTAATCACTGATAAGCATCTCAAGGTACAACCTGATGATTCATGTGTTTTTGAAGAACTATTGCCGTTTTCTGAAAATAAGCTTTTTGGGGCCAGCATTTCTCTTCAGAAAGC                                                            ]
[+] EMBL AU097278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAACAAGGAAAAAGAAATGTCTGT   ACACGGTTCAGTGTCGAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGTGGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTATGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGTTCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCTAATCACTGATAAGCATCTCAAGGTACAACCTGATGATTCATGTGTTTTTGAAGAACTATTGCCGTTTTCTGAAAATAAGCTTTTTGGGGCCAGCATTTCTCTTCAGAAAGCACTAGAAATTTTGTTGTTATG CCGTGGTTCCATTCTGAAAGATGAAGTAG         ]


>consensus_6301#0 AGTATATGTCTTTGGTGGACTAAGTGATGATGGCTTATGTTCTTGCATGAACATAATGGA CACAGCAAGTATCCAATGGAATGTGATTTCTCCTGATGACAAATGGCCATGTGCTCGCCA CTCGCATTCTCTAGTGTCCTATGGTTCAAAATTGTTTCTGTTTGGAGGTCATGATGGTCA GAGGGCACTGAATGATTTCTATAGTTTTGATACAACAACACTTAAGTGGAACAAAGAAAA CACTAATGGGAAAGCTCCATCCCCTAGATTTTCACATTGCATGTTCATCTACAAAGACTA TCTCGGCATACTTGGAGGTTGTCCTATTAGAGAAAGCAGTCAAGAAATTGCATTGCTAAA TTTAAAGCATAAAATCTGGTTTTATGTATCCATTCCATCATTGAGCCAATGCCTTTGTGT CCGTAGCTCATCAGTCATCATTGATGATGATCTTGTCATTGTTGGTGGTGGTGCGTCTTG CTATGCATTTGGAACTAGATTCAGTCAGCCAATAAAAATTGATCTGCATTTGCTGGAGTC AATATTTAAGCTTGCATACAACAAGGAAAAAGAAATGTCTGTACAACACGGTTCAGTGTC GAATGTAGACTTATTAGAAGGACATGAGGAAAATTGCAATCCCAGTGATAATGTGAAGGT GGTGATTGATACTGCTACTCTAGGTTCATCTCCTTTGGTCCTTCAGCTAGAAAAGAAGTA TGCCAAATTAGCAAAAGACATTCTAAAAAAGTTTGGATGGTTGGATCTTACTAGAAAAGT TCGAGTAAGCCAGGATAACATCCATGTTCTCTTTCCTGTTAGTAAAACTTTTCATGCCCT AATCACTGATAAGCATCTCAAGGTACAACCTGATGATTCATGTGTTTTTGAAGAACTATT GCCGTTTTCTGAAAATAAGCTTTTTGGGGCCAGCATTTCTCTTCAGAAAGCACTAGAAAT TTTGTTGTTATGCCCGTGGTTCCATTCTGAAAGATGAAGTAGCGATCAGCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)