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Oryza sativa
cluster # 6305 cluster # 6305       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6305#0 length = 1834 sequences # 4  

consensusID : consensus_6305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1834
fasta sequence
                              [ACATAGTAGTAGGAGTAGGTGGGCTGTAGTCATCTCTGCTGCCACCGTCGTCTCGTGCCTTGCATGTTTCCGAATCTCTCTGTTACTCTCCTACGCGTTTGCTTCAAGCTTTGACCGAGAAGCACCAATCCAGCTACATGTTCTTGACCTGTTCTTCTTCTTCCTGCCTCTGTATGGTGTTTTGAATGGTCAGATTTGGTCTTCGTCATGAACAGAAGCTGAGATCTTTGGTGCAGGATCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGCGCTTGAGGTGCCATCGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTCTTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAAATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAGTTCGGTGGCAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAGCCGGAATTCCGTCAGAAAAAATCATAGCTTGCATTTAGCGAATTAGAACTTTTTTTTCTTCTTCTAATACACCATGATACACACTTGAGAAGTCCTACCATGCATCAGCATTGTACTTTTCCTGTCTGATTCTTTTCCTTGCTGAGGCGATGCATGGTGGTGATGTGCTGATTGCCTGCGAGTCTTTTGCGCGGAACGTATTTCCCTCGGCAATAAAATGGTTCTAAATCCATGTAACTT]

[+] EMBL AK072705             [ACATAGTAGTAGGAGTAGGTGGGCTGTAGTCATCTCTGCTGCCACCGTCGTCTCGTGCCTTGCATGTTTCCGAATCTCTCTGTTACTCTCCTACGCGTTTGCTTCAAGCTTTGACCGAGAAGCACCAATCCAGCTACATGTTCTTGACCTGTTCTTCTTCTTCCTGCCTCTGTATGGTGTTTTGAATGGTCAGATTTGGTCTTCGTCATGAACAGAAGCTGAGATCTTTGGTGCAGGATCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGCGCTTGAGGTGCCATCGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTCTTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAAATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAGTTCGGTGGCAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAGCCGGAATTCCGTCAGAAAAAATCATAGCTTGCATTTAGCGAATTAGAACTTTTTTTTCTTCTTCTAATACACCATGATACACACTTGAGAAGTCCTACCATGCATCAGCATTGTACTTTTCCTGTCTGATTCTTTTCCTTGCTGAGGCGATGCATGGTGGTGATGTGCTGATTGCCTGCGAGTCTTTTGCGCGGAACGTATTTCCCTCGGCAATAAAATGGTTCTAAATCCATGTAACTT]
[+] EMBL AK060540             [    AGTAGTAGGAGTAGGTGGGCTGTAGTCATCTCTGCTGCCACCGTCGTCTCGTGCCTTGCATGTTTCCGAATCTCTCTGTTACTCTCCTACGCGTTTGCTTCAAGCTTTGACCGAGAAGCACCAATCCAGCTACATGTTCTTGACCTGTTCTTCTTCTTCCTGCCTCTGTATGGTGTTTTGAATGGTCAGATTTGGTCTTCGTCATGAACAGAAGCTGAGATCTTTGGTGCAGGATCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGAGCTTGAGGTGCCATTGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTCTTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAAATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAGTTCGGTGACAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAGCCGGAATTCCGTCAGAAAAAATCATAGCTTGCATTTAGCGAATTAGAACTTTTTTTTCTTCTTCTAATACACCATGATACACACTTGAGAAGTCCTACCATGCATCAGCATTGTACTTTTCCTGTCTGATTCTTTTCCTTGCTGAGGCGATGCATGGTGGTGATGTGCTGATTGCCTGCGAGTCTTTTGCGCGGAACGTATTTCCCTCGGCAATAAAATG                    ]
[+] EMBL CF324507             [                                                                                                                                                                                                                             AGATCTTTGGTGCAGGATCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF305976             [                                                                                                                                                                                                                                              TCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACCCT AATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAATGATATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGATTTGGCTTCACAGTCAGAATCTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_6305#0 ACATAGTAGTAGGAGTAGGTGGGCTGTAGTCATCTCTGCTGCCACCGTCGTCTCGTGCCT TGCATGTTTCCGAATCTCTCTGTTACTCTCCTACGCGTTTGCTTCAAGCTTTGACCGAGA AGCACCAATCCAGCTACATGTTCTTGACCTGTTCTTCTTCTTCCTGCCTCTGTATGGTGT TTTGAATGGTCAGATTTGGTCTTCGTCATGAACAGAAGCTGAGATCTTTGGTGCAGGATC CTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGAACAATGAA GCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACAT TAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAAGTGAA GGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAGATGTA CTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTACCGTGC TCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACAAGGCT GCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCACCATC TCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTCGACGT CTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCTGAGGA TTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGCATTGC CTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAACCAGAA ACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGCGCTTGAGGTGCCATCG TGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTACAGTC TTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAAGAGCACTC TAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAAGAAAT TGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAAATTGACAA GTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGCAACAG TTCGGTGGCAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAAGAAGT TTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAACTCTGA AGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAGAAGTT CAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCCAAACT GGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAGCAAGT CGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAGCCGGAATTCCGTCAGAAAAAATCATA GCTTGCATTTAGCGAATTAGAACTTTTTTTTCTTCTTCTAATACACCATGATACACACTT GAGAAGTCCTACCATGCATCAGCATTGTACTTTTCCTGTCTGATTCTTTTCCTTGCTGAG GCGATGCATGGTGGTGATGTGCTGATTGCCTGCGAGTCTTTTGCGCGGAACGTATTTCCC TCGGCAATAAAATGGTTCTAAATCCATGTAACTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)