cluster # 6321

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Oryza sativa
cluster # 6321 cluster # 6321 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6321#0 length = 1390 sequences # 4
consensusID : consensus_6321#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1390
fasta sequence
                              [TCTTTTTTTTAGTGTTTGTAGCATATGGTGTCAGAATCTCATCTGGTCCAGGTCCAGCCAAGTATATTTCCAAACCAAAAAAATAAAAATAAAATTACATATGCTCCCTCGAGAAGCAACGAGAGATTTGGATATAAAAACAGATCGTATGCTATGTATATATATTAAGCACTTGCATTAGTCATTGGTCATTAGGGCTAATTAATCGAGTTTTCCAATGCAATGAGCTGTAGGAAAATGAGAGACATGACAACCTTGTACCTAG-GAAACTCCTATGGCAGAAATGACTAGCATTGACATGGAGCTTGGAAGTACCCCCATCAAAAAACAAAAAACATCTGTATTTTATTTTTGAGATGCCGGCAGTGACATGGCAGCACATATAGCGCCGAGATGCTCCTGGATTTGTAACGCAAGCTTGAGATTAGTGAAGACACCTTCTAGCCTCCCAGCACTACCAAAAACATTTATTTTTTATGTGAGCAAGCTTCGTTTTGCTATCCTCTAATTCACACCATTGCTTTAGTTCAGGACAGCCAGAAATTTCTAGATGTTCAAGCATAGTGAGTTGTTCGATGCTCTCCGGCAAAGACTTGATGCCTCTGCATTCCCATATCTGGAGTGTCTTGAGGGATGTGAGGTTTCCTAACCATTCAGGCAGTGCTGAAATGCTCTCACAGTAACTCAGATGCAGTGACAAGAGGGAGGTGAGATACTGCATGCCCTCTGGGAAACTGTTCAGCCTTTGGCAGTGTGAGATGTGCAATTCTTGGAGAGAGGTGAGACTCCCAAACCATTCACCTAATGATGTCAGCATCTGACAAGAAGACAATGTCAATGACTGTAGTGACATGAGCTGCATAATTTTCTCTTGCAGCTCAGTCAGCGCTGGATACATGGTTATCTTTAGTTCTAGAAGAGAAGGGAGGTCACCCAGCCAATGTGGAAGCTCTGCCTGTTCGTTTCCATGTAGGGATAGTGATTTGAGTGAGTGGAGGTCTAGAATGATCTGTGGTGAGCTAGTCAGATCAGCGCACCAGTGGATGGTTAAGTGACGGAGGGCAGGAAGGTGGTGAAGCAGACTCCACTGACTCAACGGCAACGTACAGAATTTGACGACCAGATTAGTTACTGAACAAGAGGATGAAGATGTACCAGTGTGCACACTCCCTCCCCATGATGATATGACACTTTCGCCGCCCTGTATTTTCCTCCACGTAACTCTAGGCGGGAGTGGTTTCACAACCAAATTGGGGCAGTCACTTATGCTTAACCACTGAAGGTTGGGGAACATGAACTCAGTCACACCATCCTCACCACAAGAGTATGTTGTATTCCACTCTTGCAACCTTTCCATGCTGTATATGTCAAATGTCTTCAGCTGAGGAAA]

[+] EMBL CB669030             [TCTTTTTTTTAGTGTTTGTAGCATATGGTGTCAGAATCTCATCTGGTCCAGGTCCAGCCAAGTATATTTCCAAACCAAAAAAATAAAAATAAAATTACATATGCTCCCTCGAGAAGCAACGAGAGATTTGGATATAAAAACAGATCGTATGCTATGTATATATATTAAGCACTTGCATTAGTCATTGGTCATTAGGGCTAATTAATCGAGTTTTCCAATGCAATGAGCTGTAGGAAAATGAGAGACATGACAACCTTGTACCTAG GAAACTCCTATGGCAGAAATGACTAGCATTGACATGGAGCTTGGAAGTACCCCCATCAAAAAACAAAAAACATCTGTATTTTATTTTTGAGATGCCGGCAGTGACATGGCAGCACATATAGCGCCGAGATGCTCCTGGATTTGTAACGCAAGCTTGAGATTAGTGAAGACACCTTCTAGCCTCCCAGCACTACCAAAAACATTTATTTTTTATGTGAGCAAGCTTCGTTTTGCTATCCTCTAATTCACACCATTGCTTTAGTTCAGGACAGCCAGAAATTTCTAGATGTTCAAGCATAGTGAGTTGTTCGATGCTCTCCGGCAAAGACTTGATGCCTCTGCATTCCCATATCTGGAGTGTCTTGAGGGATGTGAGGTTTCCTAACCATTCAGGCAGTGCTGAAATGCTCTCACAGTAACTCAGATGCAGTGACAAGAGGGAGGTGAGATACTGCATGCCCTCTGGGAAACTGTTCAGCCTTTGGCAGTGTGAGATGTGCAATTCTTGGAGAGAGGTGAGACTCCCAAACCATTCACCTAATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF324915             [                                                                                                                                                       CTATGTATATATATTAAGCACTTGCATTAGTCATTGGTCATTAGGGCTAATTAATCGAGTTTTCCAATGCAATGAGCTGTAGGAAAATGAGAGACATGACAACCTTGTACCTAG GAAACTCCTATGGCAGAAATGACTAGCATTGACATGGAGCTTGGAAGTACCCCCATCAAAAAACAAAAAACATCTGTATTTTATTTTTGAGATGCCGGCAGTGACATGGCAGCACATATAGCGCCGAGATGCTCCTGGATTTGTAACGCAAGCTTGAGATTAGTGAAGACACCTTCTAGCCTCCCAGCACTACCAAAAACATTTATTTTTTATGTGAGCAAGCTTCGTTTTGCTATCCTCTAATTCACACCATTGCTTTAGTTCAGGACAGCCAGAAATTTCTAGATGTTCGAGCATAGTGAGTTGTTCGATGCTCTCCGGCAAAGACTTGATGCCTCTGCATTCCCATATCTGGAGTGTCTTGAGGGATGTGAGGTTTCCTAACCATTCAGGCAGTGCTGAAATGCTCTCACAGTAACTCAGATGCAGTGACAAGAGGGAGGTGAGATACTGCATGCCCTCTGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BQ905934             [                                                                                                                                                         tttttttTATATTAAGCACTTGCATTAGTCATTGGTCATTAGGGCTAATTAATCGAGTTTTCCAATGCAATGAGCTGTAGGAAAATGAGAGACATGACAACCTTGTACCTAGTGAAACTCCTATGGCAGAAATGACTAGCATTGACATGGAGCTTGGAAGTACCCCCATCAAAAAACAAAAAACATCTGTATTTTATTTTTGAGATGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB669029             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCTGAAATGGTCTCACAGTTACTCAGATGCAGTGACAAGAGGGAGGTGAGATACTGCATGCCCTCTGGGAAACTGTGCAGCATCTGGCAGTGTGAGATGTGCAATTCTTGGAGAGAGGTGAGACTCCCAAACCATTCACCTAATGATGTCAGCATCTGACAAGAAGACAATGTCAATGACTGTAGTGACATGAGCTGCATAATTTTCTCTTGCAGCTCAGTCAGCGCTGGATACATGGTTATCTTTAGTTCTAGAAGAGAAGGGAGGTCACCCAGCCAATGTGGAAGCTCTGCCTGTTCGTTTCCATGTAGGGATAGTGATTTGAGTGAGTGGAGGTCTAGAATGATCTGTGGTGAGCTAGTCAGATCAGCGCACCAGTGGATGGTTAAGTGACGGAGGGCAGGAAGGTGGTGAAGCAGACTCCACTGACTCAACGGCAACGTACAGAATTTGACGACCAGATTAGTTACTGAACAAGAGGATGAAGATGTACCAGTGTGCACACTCCCTCCCCATGATGATATGACACTTTCGCCGCCCTGTATTTTCCTCCACGTAACTCTAGGCGGGAGTGGTTTCACAACCAAATTGGGGCAGTCACTTATGCTTAACCACTGAAGGTTGGGGAACATGAACTCAGTCACACCATCCTCACCACAAGAGTATGTTGTATTCCACTCTTGCAACCTTTCCATGCTGTATATGTCAAATGTCTTCAGCTGAGGAAA]




>consensus_6321#0
TCTTTTTTTTAGTGTTTGTAGCATATGGTGTCAGAATCTCATCTGGTCCAGGTCCAGCCA
AGTATATTTCCAAACCAAAAAAATAAAAATAAAATTACATATGCTCCCTCGAGAAGCAAC
GAGAGATTTGGATATAAAAACAGATCGTATGCTATGTATATATATTAAGCACTTGCATTA
GTCATTGGTCATTAGGGCTAATTAATCGAGTTTTCCAATGCAATGAGCTGTAGGAAAATG
AGAGACATGACAACCTTGTACCTAGGAAACTCCTATGGCAGAAATGACTAGCATTGACAT
GGAGCTTGGAAGTACCCCCATCAAAAAACAAAAAACATCTGTATTTTATTTTTGAGATGC
CGGCAGTGACATGGCAGCACATATAGCGCCGAGATGCTCCTGGATTTGTAACGCAAGCTT
GAGATTAGTGAAGACACCTTCTAGCCTCCCAGCACTACCAAAAACATTTATTTTTTATGT
GAGCAAGCTTCGTTTTGCTATCCTCTAATTCACACCATTGCTTTAGTTCAGGACAGCCAG
AAATTTCTAGATGTTCAAGCATAGTGAGTTGTTCGATGCTCTCCGGCAAAGACTTGATGC
CTCTGCATTCCCATATCTGGAGTGTCTTGAGGGATGTGAGGTTTCCTAACCATTCAGGCA
GTGCTGAAATGCTCTCACAGTAACTCAGATGCAGTGACAAGAGGGAGGTGAGATACTGCA
TGCCCTCTGGGAAACTGTTCAGCCTTTGGCAGTGTGAGATGTGCAATTCTTGGAGAGAGG
TGAGACTCCCAAACCATTCACCTAATGATGTCAGCATCTGACAAGAAGACAATGTCAATG
ACTGTAGTGACATGAGCTGCATAATTTTCTCTTGCAGCTCAGTCAGCGCTGGATACATGG
TTATCTTTAGTTCTAGAAGAGAAGGGAGGTCACCCAGCCAATGTGGAAGCTCTGCCTGTT
CGTTTCCATGTAGGGATAGTGATTTGAGTGAGTGGAGGTCTAGAATGATCTGTGGTGAGC
TAGTCAGATCAGCGCACCAGTGGATGGTTAAGTGACGGAGGGCAGGAAGGTGGTGAAGCA
GACTCCACTGACTCAACGGCAACGTACAGAATTTGACGACCAGATTAGTTACTGAACAAG
AGGATGAAGATGTACCAGTGTGCACACTCCCTCCCCATGATGATATGACACTTTCGCCGC
CCTGTATTTTCCTCCACGTAACTCTAGGCGGGAGTGGTTTCACAACCAAATTGGGGCAGT
CACTTATGCTTAACCACTGAAGGTTGGGGAACATGAACTCAGTCACACCATCCTCACCAC
AAGAGTATGTTGTATTCCACTCTTGCAACCTTTCCATGCTGTATATGTCAAATGTCTTCA
GCTGAGGAAA
clustalw multiple alignements is not computed in this case