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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6337#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1309 fasta sequence
[CGCGAGCGGAGATTTTCCCCCACGATTTTTGCTGTTCATCCGTGTGGGGGAGGAGAGATTCCGCGTCGATTGGTGGTCGGATCGGAGCGAGGAGAAGCCCCCGTGTTCTTGGCTTTTTTTCCCCCGATCGAATCCGGTGGAAAGCGAGCAATAAAAACCACTTCTTTTCTTTTTCGTTTCTGGTTTTCTTTTTCTTGTTGGGTTTCTCTTCCTCCTGCTCGAGTTTGATCTCTTGATTCGTGAGGAGTGTGGCGAAGATGAGCGCGAGTTTCCTCGAGATCCAGCCTTCGGAGCTCTCATTCCCCTTTGAACTACTGAAGCAGAGCTCATGCTCCATGCAACTCACCAATAAGACCGACCATTATGTTGCATTTAAGGTCAAAACAACCAACCCAAAGCAATACTGTGTGCGCCCTAATATTGGCGTCGTATTGCCGGGGTCTACATGTGATGTTACAGTGACGATGCAAGCACAGAGGGAGGCACCTCCGGATATGCAGTGCAAGGATAAGTTCCTTGTTCAAAGTGTTGCAGCTGAGAATGGTGCAACAACTCAAGATATTAGTGCAGAAATGTTCAATAAGGTGGCAGGAAAGGTTGTTGAGGAATTCAAGCTACGTGTAGTCTATGTGCCAACGACTACATCCTCCGCAATGCCTGAAGACTCTGAACAAGGAAGTTCTGCTCGGCCATTTGCACAAGAAAATGGTATCCATAATTCAACAATGCCACAACCTGTTTTTAGATCATCTGCTGAACCAACAAAGGAGAGGCCCACAGAGCCATCGTCCATGATCTCCAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACG-ACATGAGCTGGAG-CTCCTACGGAAAGAAAG-CAGCAAAAGCAGTGGCGGTTTCT-CCCT-CACCTT-CTTGG-CCAT-CGTTGGTCTTCTCGGCAT-CAT-CGTGGGCTACATCCTCAAGAAGACATAGAAGAGGTAGAGGTTCCCAACAAAAGTTATACTCCCA-GGAAAGGATACCCCTCATATT-GGTATGCCGCGCA-TCGTGTTTTTTTCCCTCCTAAAAGGAGCACCTGTCCTAACTTGTAACAACAATACTCCTCCTAGATGCCATGGTTTGTGTACATTATGGTGGTTT-TACGCTTCGCTGCGG-TTTTTTTTTTTTTTTACATTGACTAGGCTTGATTTTTAAGAGTTTTAACTGGTGCAACTGTTTGACATTCTCCATAATCTTTTATTCTTTCTTTCTGATCAATTTATCATCATACTGTTAAACTTTAAATTTCTCTTCCAGTCACATTGGCAGGCAGT]
[+] EMBL AK069865 [CGCGAGCGGAGATTTTCCCCCACGATTTTTGCTGTTCATCCGTGTGGGGGAGGAGAGATTCCGCGTCGATTGGTGGTCGGATCGGAGCGAGGAGAAGCCCCCGTGTTCTTGGCTTTTTTTCCCCCGATCGAATCCGGTGGAAAGCGAGCAATAAAAACCACTTCTTTTCTTTTTCGTTTCTGGTTTTCTTTTTCTTGTTGGGTTTCTCTTCCTCCTGCTCGAGTTTGATCTCTTGATTCGTGAGGAGTGTGGCGAAGATGAGCGCGAGTTTCCTCGAGATCCAGCCTTCGGAGCTCTCATTCCCCTTTGAACTACTGAAGCAGAGCTCATGCTCCATGCAACTCACCAATAAGACCGACCATTATGTTGCATTTAAGGTCAAAACAACCAACCCAAAGCAATACTGTGTGCGCCCTAATATTGGCGTCGTATTGCCGGGGTCTACATGTGATGTTACAGTGACGATGCAAGCACAGAGGGAGGCACCTCCGGATATGCAGTGCAAGGATAAGTTCCTTGTTCAAAGTGTTGCAGCTGAGAATGGTGCAACAACTCAAGATATTAGTGCAGAAATGTTCAATAAGGTGGCAGGAAAGGTTGTTGAGGAATTCAAGCTACGTGTAGTCTATGTGCCAACGACTACATCCTCCGCAATGCCTGAAGACTCTGAACAAGGAAGTTCTGCTCGGCCATTTGCACAAGAAAATGGTATCCATAATTCAACAATGCCACAACCTGTTTTTAGATCATCTGCTGAACCAACAAAGGAGAGGCCCACAGAGCCATCGTCCATGATCTCCAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACG ACATGAGCTGGAG CTCCTACGGAAAGAAAG CAGCAAAAGCAGTGGCGGTTTCT CCCT CACCTT CTTGG CCAT CGTTGGTCTTCTCGGCAT CAT CGTGGGCTACATCCTCAAGAAGACATAGAAGAGGTAGAGGTTCCCAACAAAAGTTATACTCCCA GGAAAGGATACCCCTCATATT GGTATGCCGCGCA TCGTGTTTTTTTCCCTCCTAAAAGGAGCACCTGTCCTAACTTGTAACAACAATACTCCTCCTAGATGCCATGGTTTGTGTACATTATGGTGGTTT TACGCTTCGCTGCGGTTTTTTTTTTTTTTTTACATTGACTAGGCTTGATTTTTAAGAGTTTTAACTGGTGCAACTGTTTGACATTCTCCATAATCTTTTATTCTTTCTTTCTGATCAATTTATCATCATACTGTTAAACTTTAAATTTCTCTTCCAGTCACATTGGCAGGCAGT]
[+] EMBL AK104886 [CGCGAGCGGGGATTTTCCCCCACGATTTTTGCTGTTCATCCGTGTGGGGGAGGAGAGATTCCGCGTCGATTGGTGGTCGGATCGGAGCGAGGAGAAGCCCCCGTGTTCTTGGCTTTTTTTCCCCCGATCGAATCCGGTGGAAAGCGAGCAATAAAAACCACTTCTTTTCTTTTTCGTTTCTGGTTTTCTTTTTCTTGTTGGGTTTCTCTTCCTCCTGCTCGAGTTTGATCTCTTGATTCGTGAGGAGTGTGGCGAAGATGAGCGCGAGTTTCCTCGAGATCCAGCCTTCGGAGCTCTCATTCCCCTTTGAACTACTGAAGCAGAGCTCATGCTCCATGCAACTCACCAATAAGACCGACCATTATGTTGCATTTAAGGTCAAAACAACCAACCCAAAGCAATACTGTGTGCGCCCTAATATTGGCGTCGTATTGCCGGGGTCTACATGTGATGTTACAGTGACGATGCAAGCACAGAGGGAGGCACCTCCGGATATGCAGTGCAAGGATAAGTTCCTTGTTCAAAGTGTTGCAGCTGAGAATGGTGCAACAACTCAAGATATTAGTGCAGAAATGTTCAATAAGGTGGCAGGAAAGGTTGTTGAGGAATTCAAGCTACGTGTAGTCTATGTGCCAACGACTACATCCTCCGCAATGCCTGAAGACTCTGAACAAGGAAGTTCTGCTCGGCCATTTGCACAAGAAAATGGTATCCATAATTCAACAATGCCACAACCTGTTTTTAGATCATCTGCTGAACCAACAAAGGAGAGGCCCACAGAGCCATCGTCCATGATCTCCAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACG ACATGAGCTGGAG CTCCTACGGAAAGAAAG CAGCAAAAGCAGTGGCGGTTTCT CCCT CACCTT CTTGG CCAT CGTTGGTCTTCTCGGCAT CAT CGTGGGCTACATCCTCAAGAAGACATAGAAGAGGTAGAGGTTCCCAACAAAAGTTATACTCCCA GGAAAGGATACCCCTCATATT GGTATGCCGCGCA TCGTGTTTTTTTCCCTCCTAAAAGGAGCACCTGTCCTAACTTGTAACAACAATACTCCTCCTAGATGCCATGGTTTGTGTACATTATGGTGGTTT TACGCTTCGCTGCGG TTTTTTTTTTTTTTACATTGACTAGGCTTGATTTTTAAGAGTTTTAACTGGTGCAACTGTTTGACATTCT ]
[+] EMBL C97943 [ CAAACTAAATGAGGAGAATAGGGTTNCTATTCAGCAAAACCAGAAGTTACGNACATGAGCTGGAGCCTCCTACGGAAAGAAAGNCAGCAAAAGCAGTGGCGGTTTCTCCCCTNCACCTTNCTTGGNCCATCCGTTGGTCTTCTCGGCATCCATNCGTGGGCTACATCCTCAAGAAGACATAGAAGAGGTAGAGGTTCCCAACAAAAGTTATACTCCCA GGAAAGGATACCCCTCATATT GGTATGCCGCGCA TCGTGTTTTTTTCCCTCCTAAAAGGAGCACCTGTCCTAACTTGTAACAACAATACTCCTCCTAGATGCCATGGTTTGTGTACATTATGGTGGTTTNTTAG TTCGCTGCGG TTTTTTTTTTTTTTTACATTGACTAGGCTTGATTTTTAAGAGTTTTAACTGGTGCAACTGTTTGACATTCTCNATAAaaaaaaaaa ]
[+] EMBL OS0166A [ CAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACG ACATNAGCTGGAG CTCCTACGGAAAGAAAG CAGCAAAAGCAGTGGCGGTTTCT CCCT CACCTT CTTGG CCAT CGTTGGTCTTCTCGGCAT CAT CGTGGGCTACATCCTCAAGAAGACATAGAAGAGGTAGAGGTTCCCAACAAAAGTTATACTCCCAGGGNAAGGATACCCCTNATATTGGGTATGCCGCGNATTNGTGTTTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||