These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6352#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 594 fasta sequence [AGCCGCCCACCCGGTGATGTCTTCAGCCTCCCCTGTGGTTGCACCGAAACACCTCCTCCAGTAAAACAATGCAGTCTGTCT-GCTGCCCATACTCAT-GCCCCTCTCGTGGAAACCACTGGTCGAACCTGATAATTCTTGGATGATATGTCG-CATTTACACAGAAGAGG-CAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCACTTGGCAATGCA-AGGGAAGCTGTCCTCGCCGTTCCTGCCATTGGCAATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCA-GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC-CAAGGAC-CAGGGCA-GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG-CACGGTGGGACGCTTCCTCATCGC-CAGAAAGACCTGCA-AGCTATTTATGCCATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAATTTCTGTTTATGTTGGAATCTATATAGTGTTGAATTAACAAAAAA] [+] EMBL BI803809 [AGCCGCCCACCCGGTGATGTCTTCAGCCTCCCCTGTGGTTGCACCGAAACACCTCCTCCAGTAAAACAATGCAGTCTGTCT GCTGCCCATACTCAT GCCCCTCTCGTGGAAACCACTGGTCGAACCTGATAATTCTTGGATGATATGTCG CATTTACACAGAAGAGG CAGCGTGCA CCG CAGGTCATCATCCCTCCGTCCACTTGGCCATGCACAGGGAAGCTGTCCTCGCCGTTCCTGCCCTTGGCCATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCACGGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC CAAGGAC CAGGGCACGTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTGCCACGGTGGGACGCTTCCTCATCGC CAGAAAGACCTGCACAGCTATTTATGCCATTTAATTTTATGTTTGTGCTTGAGACTATGCCTTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA ] [+] EMBL BI804059 [ GTCTGTCTGGCTGCCCATACTCAT GCCCCTTTCGTGGAAACCCATGGTCGAACCTGATAATTCTTGGATGATATGTCGCCATTTACCAAGAAGAGGCCAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCACTTGCCAATGCA AGGGAAGCTGTCCTCGCCGTTCCTGCCATT GCAATGCAGGCGATCGCCCAAGTCAACTTCATTGACTTCCCA GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCACACAAGGA CAAGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CACGGTGGGACGCTTCCTCATCGC AAGAAAGACCTGCA AGCTATTTATGCAATTTAATTTTATGTTTGTGCTTGAGACTATCCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA ] [+] EMBL BI804228 [ TACTCATGGCCCCTCTCGTGGAAACCA TGGTCGAACCTGATAATTCTTGGATGATATGTCG CATTTACACAGAAGAGG CAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCA TT GCAATGCA AGGGAAGCTGTCCTCGCCGTTCCTGCCATTGGCAATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCA GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC CAAGGACACAGGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CA GGTGGGACGCTTCCTCATCGCACAGAAAGACCTGCA AGCTATTTATCCCATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA ] [+] EMBL BI801216 [ CGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC AAAGGAC AAGGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CA GGTGGGACGCTTCCTCATCGC AAGAAAGACCTGCA AGCTATTTATG CATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAGTCTATGTTTTTCTGTTTATGTTGGAATCTATATAGTGTTGAATTAACAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||