cluster # 6352

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6352 cluster # 6352 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6352#0 length = 594 sequences # 4

consensusID : consensus_6352#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 594
fasta sequence

                              [AGCCGCCCACCCGGTGATGTCTTCAGCCTCCCCTGTGGTTGCACCGAAACACCTCCTCCAGTAAAACAATGCAGTCTGTCT-GCTGCCCATACTCAT-GCCCCTCTCGTGGAAACCACTGGTCGAACCTGATAATTCTTGGATGATATGTCG-CATTTACACAGAAGAGG-CAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCACTTGGCAATGCA-AGGGAAGCTGTCCTCGCCGTTCCTGCCATTGGCAATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCA-GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC-CAAGGAC-CAGGGCA-GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG-CACGGTGGGACGCTTCCTCATCGC-CAGAAAGACCTGCA-AGCTATTTATGCCATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAATTTCTGTTTATGTTGGAATCTATATAGTGTTGAATTAACAAAAAA]

[+] EMBL BI803809             [AGCCGCCCACCCGGTGATGTCTTCAGCCTCCCCTGTGGTTGCACCGAAACACCTCCTCCAGTAAAACAATGCAGTCTGTCT GCTGCCCATACTCAT GCCCCTCTCGTGGAAACCACTGGTCGAACCTGATAATTCTTGGATGATATGTCG CATTTACACAGAAGAGG CAGCGTGCA CCG CAGGTCATCATCCCTCCGTCCACTTGGCCATGCACAGGGAAGCTGTCCTCGCCGTTCCTGCCCTTGGCCATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCACGGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC CAAGGAC CAGGGCACGTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTGCCACGGTGGGACGCTTCCTCATCGC CAGAAAGACCTGCACAGCTATTTATGCCATTTAATTTTATGTTTGTGCTTGAGACTATGCCTTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA                                             ]
[+] EMBL BI804059             [                                                                         GTCTGTCTGGCTGCCCATACTCAT GCCCCTTTCGTGGAAACCCATGGTCGAACCTGATAATTCTTGGATGATATGTCGCCATTTACCAAGAAGAGGCCAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCACTTGCCAATGCA AGGGAAGCTGTCCTCGCCGTTCCTGCCATT GCAATGCAGGCGATCGCCCAAGTCAACTTCATTGACTTCCCA GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCACACAAGGA  CAAGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CACGGTGGGACGCTTCCTCATCGC AAGAAAGACCTGCA AGCTATTTATGCAATTTAATTTTATGTTTGTGCTTGAGACTATCCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA                                             ]
[+] EMBL BI804228             [                                                                                          TACTCATGGCCCCTCTCGTGGAAACCA TGGTCGAACCTGATAATTCTTGGATGATATGTCG CATTTACACAGAAGAGG CAGCGTGCACCCGCCAGGTCATCATCCCTCCGTCCA TT GCAATGCA AGGGAAGCTGTCCTCGCCGTTCCTGCCATTGGCAATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCA GGGCATAGATGTTTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC CAAGGACACAGGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CA GGTGGGACGCTTCCTCATCGCACAGAAAGACCTGCA AGCTATTTATCCCATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAAAAAAAAAA                                             ]
[+] EMBL BI801216             [                                                                                                                                                                                                                                                                                                                    CGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCAC AAAGGAC AAGGGCA GTGATGGTTATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTG CA GGTGGGACGCTTCCTCATCGC AAGAAAGACCTGCA AGCTATTTATG CATTTAATTTTATGTTTGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGAGTCTATGTTTTTCTGTTTATGTTGGAATCTATATAGTGTTGAATTAACAAAAAA]




>consensus_6352#0
AGCCGCCCACCCGGTGATGTCTTCAGCCTCCCCTGTGGTTGCACCGAAACACCTCCTCCA
GTAAAACAATGCAGTCTGTCTGCTGCCCATACTCATGCCCCTCTCGTGGAAACCACTGGT
CGAACCTGATAATTCTTGGATGATATGTCGCATTTACACAGAAGAGGCAGCGTGCACCCG
CCAGGTCATCATCCCTCCGTCCACTTGGCAATGCAAGGGAAGCTGTCCTCGCCGTTCCTG
CCATTGGCAATGCAGGCGATCGCCACAGTCAACTTCATTGACTTCCCAGGGCATAGATGT
TTCGAGGAGGGGAGTGATGAGTCTGCCAATGTCATCACCAAGGACCAGGGCAGTGATGGT
TATGGGAAGAACTAATAGAAGGAAGAAACTCGGCTTAGTTTAGAATAAAAATTGCACGGT
GGGACGCTTCCTCATCGCCAGAAAGACCTGCAAGCTATTTATGCCATTTAATTTTATGTT
TGTGCTTGAGACTATGCATTATGTTTAACTGAGTTGGTACTCTATGATGTTGAAGCTGGA
AAAAAAAAATTTCTGTTTATGTTGGAATCTATATAGTGTTGAATTAACAAAAAA

clustalw multiple alignements is not computed in this case