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Oryza sativa
cluster # 6368 cluster # 6368       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6368#0 length = 1630 sequences # 2  
consensus_6368#1 length = 1618 sequences # 2  

consensusID : consensus_6368#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1630
fasta sequence
                              [TTTGCGCAGTAAGCATCATTAGCTACTACTGCCCCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAAAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCCCCGAAGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACCGACAGCCTCGACTCCTCCCCCTCCGGCGCCAACACCCTGTGCTTCACGCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGTACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGT]

[+] EMBL CB675152             [TTTGCGCAGTAAGCATCATTAGCTACTACTGCCCCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAAAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCCCCGAAGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACCGACAGCCTCGACTCCTCCCCCTCCGGCGCCAACACCCTGTGCTTCACGCTCCTGAACCTCCCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AK101758             [            GCATCATTAGCTACTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCGCCGAGGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACCGACAGCCTCGACTCCTCCCCCTCCGGCGCCAACACCCTGTGCTTCACGCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGTACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGT]


>consensus_6368#0 TTTGCGCAGTAAGCATCATTAGCTACTACTGCCCCTGCCGACCGCCCAGCCGGTAAAAAC CATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGG CAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGC AGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAAAGGCATGCAGGAGG AGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTT AGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGAT CTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTT CACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTG GCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCCCCGAAGCGCGTCTTGTAG GCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGC ATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACC GACAGCCTCGACTCCTCCCCCTCCGGCGCCAACACCCTGTGCTTCACGCTCCTGAACCTC CCATTCGTCAACACTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGG GGCACGGGGACCCAGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCC GCGGTGCAGTTGGACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCC GTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGTACGGCGGGTAGTGGTTC ACCCGCAGCATCTCGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTC CCCTCCTCCGACGCCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCC ACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCC GCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCG CCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCG AGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCG AGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCG GCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGC CCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCC GTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTT GTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGC TGCTGCACGT



consensusID : consensus_6368#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1618
fasta sequence
                              [TAGCACACATATAGCACACATATAGGTACACTCGTATGGCGCAGTAAGCATCATTAGCTACTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCGCCGAGGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACGCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGCACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGTT]

[-] EMBL AK063973             [TAGCACACATATAGCACACATATAGGTACACTCGTATGGCGCAGTAAGCATCATTAGCTACTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGTCGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACAACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTACTGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTGGGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTAACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGTACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTTGATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGGGGCCGAGGCGGTTGTCGCCGAGGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGGTGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCCGCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACGCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGCACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGTT]
[-] EMBL CB675151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGCGGCCCGGCGGGAGGAGGCACGGCGGGTAGTGGTTCACCCGCAGCATCTTGTCGCTGCCCTTGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCTGACGCCCCCAGCCCCAGCCCGTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCC                ]


>consensus_6368#1 TAGCACACATATAGCACACATATAGGTACACTCGTATGGCGCAGTAAGCATCATTAGCTA CTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGT CGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACA ACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTAC TGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTG GGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTA ACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGT ACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTT GATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGG GGCCGAGGCGGTTGTCGCCGAGGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGG TGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCC GCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACGCTCCTGAACCTCCCATTCGTCAACA CTTGGAGGGAGTCGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCC AGCGGGCAGGGGAGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGG ACCTGAGCACGGAGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACT CGTCCCGGTCGCGGCCCGGCGGGAGGAGGCACGGCGGGTAGTGGTTCACCCGCAGCATCT CGTCGCTGCCCTCGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACG CCCCCAGCCCCAGCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCG CCCCCGTGTACGCCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACG AGGCGGCGCCGGCCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGA TGCTCTTGCTGCCGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGT GCGGGAGCGCGAAGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGA CGCCGTGGTTGGTCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCG CCGCGCCCGGTGCCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGC CCTTGGGGCACCTCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCA TGGCGCGTGATCAGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAAC AGAGTGAGGAAACAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6368#0      -----------------------------------TTTGCGCAGTAAGCATCATTAGCTA 25
consensus_6368#1      TAGCACACATATAGCACACATATAGGTACACTCGTATGGCGCAGTAAGCATCATTAGCTA 60
                                                          * **********************

consensus_6368#0      CTACTGCCCCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGT 85
consensus_6368#1      CTACTGCACCTGCCGACCGCCCAGCCGGTAAAAACCATGCTACAAAAGGGGCGGCAGCGT 120
                      ******* ****************************************************

consensus_6368#0      CGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACA 145
consensus_6368#1      CGACAGGAGCAGCACATAATCACATATGCATGCGGCAAGCTATTTTACACAACATGCACA 180
                      ************************************************************

consensus_6368#0      ACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTAC 205
consensus_6368#1      ACGCTGCACTGAACTGCACTCCACTGCTCTGCTGCAGAAAACCCCAGGACAGAGGAGTAC 240
                      ************************************************************

consensus_6368#0      TGCTGCACTACTGCACAGCAAAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTG 265
consensus_6368#1      TGCTGCACTACTGCACAGCAGAGGCATGCAGGAGGAGGCAGCTCGCCAGTGCCAGTTTTG 300
                      ******************** ***************************************

consensus_6368#0      GGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTA 325
consensus_6368#1      GGCTGGCCAAGCAAGCCAAGGCAACGGCGGCCTTTAGTTACCAGAAATGGGTTAAAAGTA 360
                      ************************************************************

consensus_6368#0      ACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGT 385
consensus_6368#1      ACACAACACAAGGATAGATCGATCGATCGATCGATCTCGATCATATTCACAGCTACCAGT 420
                      ************************************************************

consensus_6368#0      ACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTT 445
consensus_6368#1      ACCACGGAGCTAACTACACTAGTACAGTAACACTTCACAGTTGTTCACAGTCGTCGGGTT 480
                      ************************************************************

consensus_6368#0      GATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGG 505
consensus_6368#1      GATCGATTTATTTCTTCGTCGCGGCCTCATCGTTGGCAGCGGCGTGCTGCAGCTCGTAGG 540
                      ************************************************************

consensus_6368#0      GGCCGAGGCGGTTGTCCCCGAAGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGG 565
consensus_6368#1      GGCCGAGGCGGTTGTCGCCGAGGCGCGTCTTGTAGGCGGCCTTCTTGTACTCCCCCCAGG 600
                      **************** **** **************************************

consensus_6368#0      TGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCC 625
consensus_6368#1      TGAACTCCCTGTACAGGCTCTGCTCCCCCTCCCGCATCACCTGCTCCAGCGGCGCGATCC 660
                      ************************************************************

consensus_6368#0      GCTGCGACGCCGCTGGCCCGCCGAAGTAGATCACCGACAGCCTCGACTCCTCCCCCTCCG 685
consensus_6368#1      GCTGCGACGCCGCTGGCCCGCCGAAGTAGATCAC-------------------------- 694
                      **********************************                          

consensus_6368#0      GCGCCAACACCCTGTGCTTCACGCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGT 745
consensus_6368#1      ----------------------GCTCCTGAACCTCCCATTCGTCAACACTTGGAGGGAGT 732
                                            **************************************

consensus_6368#0      CGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGG 805
consensus_6368#1      CGCCGACGTTGACGAAGAAGGAATCGGGGTCGGGGGGCACGGGGACCCAGCGGGCAGGGG 792
                      ************************************************************

consensus_6368#0      AGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGG 865
consensus_6368#1      AGGAGTAGTCTCCGCGGAGGAGGATCTGGAGGCCCGCGGTGCAGTTGGACCTGAGCACGG 852
                      ************************************************************

consensus_6368#0      AGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGC 925
consensus_6368#1      AGATGATCTGTGGGTCCGTGTGCTCCCCGAAGCCCGTCACGCCGCACTCGTCCCGGTCGC 912
                      ************************************************************

consensus_6368#0      GGCCCGGCGGGAGGAGGTACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCT 985
consensus_6368#1      GGCCCGGCGGGAGGAGGCACGGCGGGTAGTGGTTCACCCGCAGCATCTCGTCGCTGCCCT 972
                      ***************** ******************************************

consensus_6368#0      CGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCA 1045
consensus_6368#1      CGCACCCCACCACCATCCGCCGCAGCACGCACCTCCCCTCCTCCGACGCCCCCAGCCCCA 1032
                      ************************************************************

consensus_6368#0      GCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACG 1105
consensus_6368#1      GCCCCTCCGCCATCAGCTCCATCACCCTGCACCCCACCCCCCTCACCGCCCCCGTGTACG 1092
                      ************************************************************

consensus_6368#0      CCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGG 1165
consensus_6368#1      CCTCCACCGCCGCCCTCAGCGCCGCCGGCAGCGCCGCGCCGCCGGACGAGGCGGCGCCGG 1152
                      ************************************************************

consensus_6368#0      CCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGC 1225
consensus_6368#1      CCGAGAGGAGGAGGTACTCCAGCCACCCCACGTCGCCGTTCGACCCGATGCTCTTGCTGC 1212
                      ************************************************************

consensus_6368#0      CGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGA 1285
consensus_6368#1      CGTAGCCGAGGGGCCGGGCGGGGCCGGACATGTCGAGCTTCTCCTGGTGCGGGAGCGCGA 1272
                      ************************************************************

consensus_6368#0      AGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGG 1345
consensus_6368#1      AGAACGCCATGGCGCTCGACTCCAACGCGTCGGCGAGCCCCGCGGGGACGCCGTGGTTGG 1332
                      ************************************************************

consensus_6368#0      TCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTG 1405
consensus_6368#1      TCGCCTTGAAGAACCCCAGGGTGCGGCACGCGTCGGCCACCGCCGCCGCCGCGCCCGGTG 1392
                      ************************************************************

consensus_6368#0      CCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACC 1465
consensus_6368#1      CCGACAGGTCGATGCACGGGATGACAGCTTGCGGCCCGGCATTGGCGCCCTTGGGGCACC 1452
                      ************************************************************

consensus_6368#0      TCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATC 1525
consensus_6368#1      TCACCAGCGGGATGTGCTCGATGGAGCTCGGCGCCGTGATCGCCACCATGGCGCGTGATC 1512
                      ************************************************************

consensus_6368#0      AGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAA 1585
consensus_6368#1      AGATCAAAAACCACCTAATTAAGCTTCTTCTTTTTGTTGTGTACCAACAGAGTGAGGAAA 1572
                      ************************************************************

consensus_6368#0      CAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGT- 1630
consensus_6368#1      CAGAGCAAGAACAGGGGAGGTGTTGCTGCCTCTGCTGCTGCACGTT 1618
                      ********************************************* 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)