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Oryza sativa
cluster # 637 cluster # 637       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_637#0 length = 2111 sequences # 2  

consensusID : consensus_637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2111
fasta sequence
                              [ACACTGCAGAGAGAGAGAAAGGGTCAGTCGGAATGGCGGAGGCGGCGAGCTCGAGCTCGGGCACGTAGCTCTCACGCCGCTCGCCGTCGTCGCTTTCCCCGGCGAGGCCGCCCGCGCCGGCCGCCGCCGCCGCCTCTTCTCCGGAGGCCGCCACCGCCTCCCCGCGCGGCGGCTCCGGGGTCACCCGTCTCGCCCCCCCCCTCTCCCGCTAGGGTTTTCTCGGATCCCGAATCGCCGTAGTTTCACAAATGGCCTCATCCCAACAAGTTGAGCTTGAGGCTGCAAAGCTTCTTCAGAAACTCATTCAAGAGTCAAAGGATGAACCTGCTAAATTAGCAACAAAACTTTATGTGATATGCCAACATATGAAACTAAGTGGAAAAGAGCAGTCACTGCCATATCAGGTCATATCAAGGGCCATGGAGACTGTTGTAAGCCAACATGGAATAGATATGGATGCGTTGCGATCATCGAGAATCCCATTAGCTGGTGGTCCACAAGCAGGAGATTCTAGTGGTGCTATGCCTAAGGATAAGGAGATCATTGGCAGTCAACCTCCCATGGTTGGTACTGATGCATCCCAAAGTAGTGCGCATGCTGGATTATGGAATTTTCCATCAGGTTCAGCAGATATGGCACGTCACAGTGCATCTATTTCAGGCAGGGTCCCAGCAGGACCAAATAGGAGCGATGTTGCAGGAGCTGATATTCATCAAGGCTCCATGTCACAGAAGAGTGGAAGATCCTCTGGAATGGAAAGCCCTGCCAGTCTGCAAATAGAGGATACTAGATCTATGAATTCACATGGTTCTTTGAAGTCAGATGAAAAAACAAGCAAAAAATCATCTTCTAAGAGAAAAAGAGTGGATCCAAAAGCAGCAGGGGACTTGCATTCTGAAGACAACTCAAAATCAGATGCCATGTCTACCGGACAAAATATTAGAAAGGGAAAACAGCCTGGCAAAGCTGGTACTCAGGGTCAACTTTCCAGGACAGTCGAACACGATCCATCACTTACATTGCAAGTTGGTAATGCTCAGGTGCCACCGTTACCCAGTGGTGCACCTTTCTTTAGGGCTCACCAGGAAGGACCATCAGCTTCTTCTGCAAGGACTATAGACAAGACTAAACCATCAAATCCATTCACAATGGCACAAATTTCAAATTTTGCTGAAGGACTAGCTTCTGGCAACATTCCTGCTGAGTTGCAGAAAAGTATATTGGGAGGAGCAAATCTACTTAATGCTAGTTTTGGCTGGAACCGGAATGCACAAGGTCCAGTTATGAAGAATACTCAAGGGTCTGTTCCCAACCTAATGAGACCTGGTGTTAATGTCGAAGGGAAAGTTAACTTAGGATCACAAGGAACTTTTAATTCTATGTCTGCATCACAAATGGATTACCCAACAGTTCCTCCTTATGTGTCTTCTTCCTTTGGAGGTGGTCCACAGTATCTTGACAAAGGGAAAGACTTGACTTCAGGCAATACTGGCAGTGAACTAAATTCTTCTAAAGCTGGAGCTCAGCTGGGGATCATGCAT-----TCCAATGCAAGAAAGGCACGGAATTGTCAGAGCACCTCAGAGAGCTGGTTCATCTCAAATGTCTCAAACCTCTCCCAGCATTCCATTCAAAGAGCAGCAGTTGAAGCAGCTCAGAGCGCAGTGCTTAGTATTTCTTGCATTTAGAAATAATCTGCAGCCCCGGAAGGTACATCTTGAAATTGCTTTAGGTGTTGGTCCCCCTGCTTCAGAAGGTGGCAGTGCAGGTCAGAGAGGTAGTGAGAGCAGAATGGCTGATGGTTCTGGAAAGGAAAATGGAAACAGCCAGGAAAACCCTGCTATTTTTGGTAGGCAAAGTGATATTTCTAGACTTCAATCAACATCTACAGGCAGTGTTGCGGATGTTGATTCCGCATCAAAGGACCCAGAAATTGTTAAAAAGAAGATCAAGATAGCTGAACATGAGAAATCATTTGAAGCAGAAAATATCCAGCAAACCGTTCCTATACAGGGAACTGATTCTGAAATGCATTCTCAAGAAACGATATCTCCCATGCCATCTGGGCAACTGCATTACTTTCAGGGAGATACAAGAAAAACTACCCCTGAGAT]

[+] EMBL AK122137             [ACACTGCAGAGAGAGAGAAAGGGTCAGTCGGAATGGCGGAGGCGGCGAGCTCGAGCTCGGGCACGTAGCTCTCACGCCGCTCGCCGTCGTCGCTTTCCCCGGCGAGGCCGCCCGCGCCGGCCGCCGCCGCCGCCTCTTCTCCGGAGGCCGCCACCGCCTCCCCGCGCGGCGGCTCCGGGGTCACCCGTCTCGCCCCCCCCCTCTCCCGCTAGGGTTTTCTCGGATCCCGAATCGCCGTAGTTTCACAAATGGCCTCATCCCAACAAGTTGAGCTTGAGGCTGCAAAGCTTCTTCAGAAACTCATTCAAGAGTCAAAGGATGAACCTGCTAAATTAGCAACAAAACTTTATGTGATATGCCAACATATGAAACTAAGTGGAAAAGAGCAGTCACTGCCATATCAGGTCATATCAAGGGCCATGGAGACTGTTGTAAGCCAACATGGAATAGATATGGATGCGTTGCGATCATCGAGAATCCCATTAGCTGGTGGTCCACAAGCAGGAGATTCTAGTGGTGCTATGCCTAAGGATAAGGAGATCATTGGCAGTCAACCTCCCATGGTTGGTACTGATGCATCCCAAAGTAGTGCGCATGCTGGATTATGGAATTTTCCATCAGGTTCAGCAGATATGGCACGTCACAGTGCATCTATTTCAGGCAGGGTCCCAGCAGGACCAAATAGGAGCGATGTTGCAGGAGCTGATATTCATCAAGGCTCCATGTCACAGAAGAGTGGAAGATCCTCTGGAATGGAAAGCCCTGCCAGTCTGCAAATAGAGGATACTAGATCTATGAATTCACATGGTTCTTTGAAGTCAGATGAAAAAACAAGCAAAAAATCATCTTCTAAGAGAAAAAGAGTGGATCCAAAAGCAGCAGGGGACTTGCATTCTGAAGACAACTCAAAATCAGATGCCATGTCTACCGGACAAAATATTAGAAAGGGAAAACAGCCTGGCAAAGCTGGTACTCAGGGTCAACTTTCCAGGACAGTCGAACACGATCCATCACTTACATTGCAAGTTGGTAATGCTCAGGTGCCACCGTTACCCAGTGGTGCACCTTTCTTTAGGGCTCACCAGGAAGGACCATCAGCTTCTTCTGCAAGGACTATAGACAAGACTAAACCATCAAATCCATTCACAATGGCACAAATTTCAAATTTTGCTGAAGGACTAGCTTCTGGCAACATTCCTGCTGAGTTGCAGAAAAGTATATTGGGAGGAGCAAATCTACTTAATGCTAGTTTTGGCTGGAACCGGAATGCACAAGGTCCAGTTATGAAGAATACTCAAGGGTCTGTTCCCAACCTAATGAGACCTGGTGTTAATGTCGAAGGGAAAGTTAACTTAGGATCACAAGGAACTTTTAATTCTATGTCTGCATCACAAATGGATTACCCAACAGTTCCTCCTTATGTGTCTTCTTCCTTTGGAGGTGGTCCACAGTATCTTGACAAAGGGAAAGACTTGACTTCAGGCAATACTGGCAGTGAACTAAATTCTTCTAAAGCTGGAGCTCAGCTGGGGATCATGCAT     TCCAATGCAAGAAAGGCACGGAATTGTCAGAGCACCTCAGAGAGCTGGTTCATCTCAAATGTCTCAAACCTCTCCCAGCATTCCATTCAAAGAGCAGCAGTTGAAGCAGCTCAGAGCGCAGTGCTTAGTATTTCTTGCATTTAGAAATAATCTGCAGCCCCGGAAGGTACATCTTGAAATTGCTTTAGGTGTTGGTCCCCCTGCTTCAGAAGGTGGCAGTGCAGGTCAGAGAGGTAGTGAGAGCAGAATGGCTGATGGTTCTGGAAAGGAAAATGGAAACAGCCAGGAAAACCCTGCTATTTTTGGTAGGCAAAGTGATATTTCTAGACTTCAATCAACATCTACAGGCAGTGTTGCGGATGTTGATTCCGCATCAAAGGACCCAGAAATTGTTAAAAAGAAGATCAAGATAGCTGAACATGAGAAATCATTTGAAGCAGAAAATATCCAGCAAACCGTTCCTATACAGGGAACTGATTCTGAAATGCATTCTCAAGAAACGATATCTCCCATGCCATCTGGGCAACTGCATTACTTTCAGGGAGATACAAGAAAAACTACCCCTGAGAT]
[+] EMBL AK106539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCAGTCAACCTCCCATGGTTGGTACTGATGCATCCCAAAGTAGTGCGCATGCTGGATTATGGAATTTTCCATCAGGTTCAGCAGATATGGCACGTCACAGTGCATCTATTTCAGGCAGGGTCCCAGCAGGACCAAATAGGAGCGATGTTGCAGGAGCTGATATTCATCAAGGCTCCATGTCACAGAAGAGTGGAAGATCCTCTGGAATGGAAAGCCCTGCCAGTCTGCAAATAGAGGATACTAGATCTATGAATTCACATGATTCTTTGAAGTCAGATGAAAAAACAAGCAAAAAATCATCTTCTAAGAGAAAAAGAGTGGATCCAAAAGCAGCAGGGGACTTGCATTCTGAAGACAACTCAAAATCAGATGCCATGTCTACCGGACAAAATATTAGAAAGGG ACACAGCCTGGCAAAGCTGGTACTCAGGGTCAACTTTCCAGGACAGTCGAACACGATCCATCACATACATTACAAGTTGGTAATGCTCAGGTGCCACCGTTACCCAGTGGTGCACCTTTCTTTAGGGCTCACCAGGAAGGACCATCAGCTTCTTCTGCAAGGACTATAGACAAGACTAAACCATCAAATCCATTCACAATGGCACAAATTTCAAATTTTGCTGAAGGACTAGCTTCTGGCAACATTCCTGCTGAGTTGCAGAAAAGTATATTGGGAGGAGCAAATCTACTTAATGCTAGTTTTGGCTGGAACCAGAATGCACAAGGTCCAGTTATGAAGAATACTCAAGGGTCTGTTCCCAACCTAATGAGACCTGGTGTTAATGTCGAAGGGAAAGTTAACTTAGGATCACAAGGAACTTTTAATTCTATGTCTGCATCACAAATGGATTACCCCACAGTTCCTCCTTATGTGTCTTCTTCCTTTGGAGGTGGTCCACAGTATCTTGACAAAGGGAAAGACTTGACTTCAGGCAATACTGGCAGTGAACTAAATTCTTCTAAAGCTGGAGCTCAGCTGGGGATCATGCATGGCAGTCCAATGCAAGAAAGGCACGGAATTGTCAGAGCACCTCAGAGAGCTGGTTCATCTCAAATGTCTCAAACCTCTCCCAGCATTCCATTCAAAGAGCAGCAGTTGAAGCAGCTCAGAGCGCAGTGCTTAGTATTTCTTGCATTTAGAAATAATCTGCAGCCCCGGAAGGTACATCTTGAAATTGCTTTAGGTGTTGGTCCCCCTGCTTCAGAAGGTGGCAGTGCAGGTCAGAGAGGTAGTGAGAGCAGAATGGCTGATGGTTCTGGAAAGGAAAATGGAAACAGCCAGGAAAACCCTGCTATTTTTGGTAGGCAAAGTGATATTTCTAGACTTCAATCAACATCTACAGGCAGTGTTGCGGATGTTGATTCCGCATCAAAGGACCCAGAAATTGTTAAAAAGAAGATCAAGATAGCTGAACATGAGAAATCATTTGAAGCAGAAAATATCCAGCAAACCGTTCCTATACAGGGAACTGATTCTGAAATGCATTCTCAAGAAACGATATCTCCCATGCCATCTGGGCAACTGCATTACTTTCAGGGAGATACAAGAAAAACTACCCCTGAGAT]


>consensus_637#0 ACACTGCAGAGAGAGAGAAAGGGTCAGTCGGAATGGCGGAGGCGGCGAGCTCGAGCTCGG GCACGTAGCTCTCACGCCGCTCGCCGTCGTCGCTTTCCCCGGCGAGGCCGCCCGCGCCGG CCGCCGCCGCCGCCTCTTCTCCGGAGGCCGCCACCGCCTCCCCGCGCGGCGGCTCCGGGG TCACCCGTCTCGCCCCCCCCCTCTCCCGCTAGGGTTTTCTCGGATCCCGAATCGCCGTAG TTTCACAAATGGCCTCATCCCAACAAGTTGAGCTTGAGGCTGCAAAGCTTCTTCAGAAAC TCATTCAAGAGTCAAAGGATGAACCTGCTAAATTAGCAACAAAACTTTATGTGATATGCC AACATATGAAACTAAGTGGAAAAGAGCAGTCACTGCCATATCAGGTCATATCAAGGGCCA TGGAGACTGTTGTAAGCCAACATGGAATAGATATGGATGCGTTGCGATCATCGAGAATCC CATTAGCTGGTGGTCCACAAGCAGGAGATTCTAGTGGTGCTATGCCTAAGGATAAGGAGA TCATTGGCAGTCAACCTCCCATGGTTGGTACTGATGCATCCCAAAGTAGTGCGCATGCTG GATTATGGAATTTTCCATCAGGTTCAGCAGATATGGCACGTCACAGTGCATCTATTTCAG GCAGGGTCCCAGCAGGACCAAATAGGAGCGATGTTGCAGGAGCTGATATTCATCAAGGCT CCATGTCACAGAAGAGTGGAAGATCCTCTGGAATGGAAAGCCCTGCCAGTCTGCAAATAG AGGATACTAGATCTATGAATTCACATGGTTCTTTGAAGTCAGATGAAAAAACAAGCAAAA AATCATCTTCTAAGAGAAAAAGAGTGGATCCAAAAGCAGCAGGGGACTTGCATTCTGAAG ACAACTCAAAATCAGATGCCATGTCTACCGGACAAAATATTAGAAAGGGAAAACAGCCTG GCAAAGCTGGTACTCAGGGTCAACTTTCCAGGACAGTCGAACACGATCCATCACTTACAT TGCAAGTTGGTAATGCTCAGGTGCCACCGTTACCCAGTGGTGCACCTTTCTTTAGGGCTC ACCAGGAAGGACCATCAGCTTCTTCTGCAAGGACTATAGACAAGACTAAACCATCAAATC CATTCACAATGGCACAAATTTCAAATTTTGCTGAAGGACTAGCTTCTGGCAACATTCCTG CTGAGTTGCAGAAAAGTATATTGGGAGGAGCAAATCTACTTAATGCTAGTTTTGGCTGGA ACCGGAATGCACAAGGTCCAGTTATGAAGAATACTCAAGGGTCTGTTCCCAACCTAATGA GACCTGGTGTTAATGTCGAAGGGAAAGTTAACTTAGGATCACAAGGAACTTTTAATTCTA TGTCTGCATCACAAATGGATTACCCAACAGTTCCTCCTTATGTGTCTTCTTCCTTTGGAG GTGGTCCACAGTATCTTGACAAAGGGAAAGACTTGACTTCAGGCAATACTGGCAGTGAAC TAAATTCTTCTAAAGCTGGAGCTCAGCTGGGGATCATGCATTCCAATGCAAGAAAGGCAC GGAATTGTCAGAGCACCTCAGAGAGCTGGTTCATCTCAAATGTCTCAAACCTCTCCCAGC ATTCCATTCAAAGAGCAGCAGTTGAAGCAGCTCAGAGCGCAGTGCTTAGTATTTCTTGCA TTTAGAAATAATCTGCAGCCCCGGAAGGTACATCTTGAAATTGCTTTAGGTGTTGGTCCC CCTGCTTCAGAAGGTGGCAGTGCAGGTCAGAGAGGTAGTGAGAGCAGAATGGCTGATGGT TCTGGAAAGGAAAATGGAAACAGCCAGGAAAACCCTGCTATTTTTGGTAGGCAAAGTGAT ATTTCTAGACTTCAATCAACATCTACAGGCAGTGTTGCGGATGTTGATTCCGCATCAAAG GACCCAGAAATTGTTAAAAAGAAGATCAAGATAGCTGAACATGAGAAATCATTTGAAGCA GAAAATATCCAGCAAACCGTTCCTATACAGGGAACTGATTCTGAAATGCATTCTCAAGAA ACGATATCTCCCATGCCATCTGGGCAACTGCATTACTTTCAGGGAGATACAAGAAAAACT ACCCCTGAGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)