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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6390 cluster # 6390       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6390#0 length = 615 sequences # 4  

consensusID : consensus_6390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 615
fasta sequence
                              [TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC--GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA-AAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGATGAGGGAAG]

[-] EMBL CF326491             [TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCAGAAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGT                                                                                                                                                                             ]
[+] EMBL CB662009             [                     ATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA AAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAAATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAAACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAAATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGATGAGGGAAG]
[-] EMBL CB662008             [                      TTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA GAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGAT        ]
[+] EMBL D42664               [                                               AAACGAATATAATAAGGGTGATATCCGAGACGGAATAANCNGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA GAAAAAAAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_6390#0 TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAAT AAGGGTGATATCCGACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATC CGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCAAAAAAAAAAAACCCGAAACCCTAG CTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACC GCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGC CGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCC ACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGG CGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCT GCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCC GCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGC TGTGGATGAGGGAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)