cluster # 6396

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Oryza sativa
cluster # 6396 cluster # 6396 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6396#0 length = 628 sequences # 4

consensusID : consensus_6396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 628
fasta sequence

                              [AGCTAAATACCCTCACTAAGGGAATAGCT-CGGCGCGC--CCG-CGCGCGGC-TTTGGCGCCTGCGCGCCGCCGCGCCCGTCG-TCG--CCG-CATGGGTGGTGCTTCTTCTCGCGAGGATGGTTTGGAACCGGAGTCGTCTCCTGCGACGGCGGCGTCCGAGCAGGCGAGGTCGTCGTCGGAGAGGCAGCCCGAGCCGGCCTCGTCGCCGTCGCCGAAGGAGACGTACACGGCGTACTTCCACGACA-GCTGCT-GCGTCGGGTGCTGCGA-CATGGA-CGA-CGA-CGA-CGACGACGGCGAGGAGGTGCTCGAAGAGGAGGAGGAGGACGACGACGAGCCGTCGGAGACGACGCCGTTCGAGTGGGAAATTGTTAGGTCTCTGCCTCTCAGCCCGACGGCGGCGGCGGAGGTTCGCCGGTACAGGGACTCGGCGCCGCTCGGCGGAAGCGTCGTTCGGCTGTGGAATCACGTCGCCGGCGGGGGCCGTAACGGCGGCGAGCCCGAGGCGGAGGGGACTAGCCGGCGGCGTTGTCTCGGCCTTCTGAGCATCCAAAGGAGTAATAAAAATCAAAATTTTATTTATCGGCTGTTGTAAAAGTTTGTAGCTTTAACATGTTCAGCATTGTACAAAAAAAAAAAA]

[+] EMBL CB965100             [AGCTAAATACCCTCACTAAGGGAATAGCTGCGGCGCGCCGCCGCCGC CGGCATTTGGCGCCTGCGCGCCGCCGCGCCCGTCG TCG  CCGCCATGGGTGGTGCTTCTTCTCGCGAGGATGGTTTGGAACCGGAGTCGTCTCCTGCGACGGCGGCGTCCGAGCAGGCGAGGTCGTCGTCGGAGAGGCAGCCCGAGCCGGCCTCGTCGCCGTCGCCGAAGGAGACGTACACGGCGTACTTCCACGCCACGCTGCTGGCGT GGGTGCTGCGACCATGGACCGACCGACCGACCGACGACGGC                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB965029             [          CCTCACTAAGGGAATAGCT CGGCGCGC  CGC CGCGCGGC ATTGGCGCCTGCGCGCCGCCGCGCCCGTCG TCG  CCG CATGGGTGGTGCTTCTTCTCGCGAGGATGGTTTGGAACCGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB964569             [                                         CG CGCGCGGC TCTGGCGCCTGCGCGCCG CGCGCCCGTCG TCG  CCG CATGGGTGGTGCTTCTTCTCGCGAGGATGGTTTGGAACCGGAGTCGTCTCCTGCGACGGCGGCGTCCGAGCAGGCGAGGTCGTCGTCGGAGAGGCAGCCCGAGCCGGCCTCGTCGCCGTCGCCGAAGGAGACGTACACGGCGTACTTCCACGACA GCTGCT GCGTCGGGTGCTGCGA CATGGA CGA CGA CGA CGACGACGGCGAGGAGGTGCTCGAAGAGGAGGAGGAGGACGACGACGAGCCGTCGGAGACGACGCCGTTCGAGTGGGAAATTGTTAGGTCTCTGCCTCTCAGCCCGACGGCGGCGGCGGAGGTTCGCCGGTACAGGGACTCGGCGCCGCTCGGCGGAAGCGTCGTTCGGCTGTGGAATCACGTCGCCGGCGGGGGCCGTAACGGCGGCGAGCCCGAGGCGGAGGGGACTAGCCGGCGGCGTTGTCTCGGCCTTCTGAGCATCCAAAGGAGTAATAAAAATCAAAATTTTATTTATCGGCTGTTGTAAAAGTTTGTAGCTTTAACATGTTCAGCATTGTACAAAAAAAAAAAA]
[+] EMBL BI801168             [                                                  ca TTTGGCG CTGCGCGCC CGGCG CCGTCGTTCGCCCCC CAT GGT GT CTTCTTCTC CGAGGATGGTTT GAACCGGAGTCGTCTCCTGCGACGGCGGCGTCCGA CAGGCGAGGTCGTCGTCGGAGA GCAGCCCGAGCCGGCCTCGTC CCGTCGCCGAAGGAGACGTACACGGCGTACTTCCACGACA GCTGCT GCGTCGGGTGCTGCGA CATGGA CGA CGA CGA CGACGACGGCGAGGAGGTGCTCGAAGAGGAGGAGGAGGACGACGACGAGCCGTCGGAGACGACCCCGTTCGAGTGGGAAATTGTTAGGTCTCT CCTCTCAGCCCGACGGC GC GCGGAGGTTCGCCGGTACAGGGACTCGGC CCGCTCGGCGGAAGCGTCGTTCGCCTGTGGAATCACGTCGCCGGCGGGGG CGTAACGGCGGCGAGCCCGAGCCGGAGGGGACTA CC GCGGCGTTGTCTCGCCCTTCTGAGCATCCAAAGGAGTAATAAAAATCAAAATTTTATTTATC GCTGTTGTAAAAGTTTGTAGCTTTAAAATGTTCAGCATTGTACAAAAA       ]




>consensus_6396#0
AGCTAAATACCCTCACTAAGGGAATAGCTCGGCGCGCCCGCGCGCGGCTTTGGCGCCTGC
GCGCCGCCGCGCCCGTCGTCGCCGCATGGGTGGTGCTTCTTCTCGCGAGGATGGTTTGGA
ACCGGAGTCGTCTCCTGCGACGGCGGCGTCCGAGCAGGCGAGGTCGTCGTCGGAGAGGCA
GCCCGAGCCGGCCTCGTCGCCGTCGCCGAAGGAGACGTACACGGCGTACTTCCACGACAG
CTGCTGCGTCGGGTGCTGCGACATGGACGACGACGACGACGACGGCGAGGAGGTGCTCGA
AGAGGAGGAGGAGGACGACGACGAGCCGTCGGAGACGACGCCGTTCGAGTGGGAAATTGT
TAGGTCTCTGCCTCTCAGCCCGACGGCGGCGGCGGAGGTTCGCCGGTACAGGGACTCGGC
GCCGCTCGGCGGAAGCGTCGTTCGGCTGTGGAATCACGTCGCCGGCGGGGGCCGTAACGG
CGGCGAGCCCGAGGCGGAGGGGACTAGCCGGCGGCGTTGTCTCGGCCTTCTGAGCATCCA
AAGGAGTAATAAAAATCAAAATTTTATTTATCGGCTGTTGTAAAAGTTTGTAGCTTTAAC
ATGTTCAGCATTGTACAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case