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Oryza sativa
cluster # 6406 cluster # 6406       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6406#0 length = 3468 sequences # 1  
 consensus_6406#1 length = 2553 sequences # 2  
consensus_6406#2 length = 798 sequences # 1  
consensusID : consensus_6406#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3468
fasta sequence 
                              [TTATGGTTGGTTGGTTTTGTCCGCAAGGTTGTATTAAGGAACATTCATATTTTTTAAATGTTTTTTCACCATAATTTTACCTGCCCAACCTTAGCAACATTAGTGATCGTTGTAATTTGTTATCCTGTCAATAATAGAATCCTCATAACAATCCTATATTAGACTTACTATAGTCATTTGTTTCCAAATATGATAGAATTAGTAACATTATGTTGCTAACCATTTCTTTTTGCGCGATTGTCCCGAATACTTTCTAACTAGCATGTTTCTGTTGTTGACCTTTGCAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACACACTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGGTAAACATTGCTTGCTGAGTTTAACTCTAGACATATTTGTTTATTTCTTTACTTTGCTATTGGAAATAGATTTATGATGTGTGTTATCTTTTGGATTTTGACTTTCAGTGGAAGCTTATCATTAGCAATTTAGCATCCATATTTAATCATTTTTCTGGAACTTGCACTTGAATCGCTAAACAACAGGTTTGAAGTTAATTTATGGGTGTTTTAGACTTTGTGTCACATAGGAAAAGTTGTCGCTCATGAAGCGGTAAATAAAATAATTGCAGTCACTGATTCTGAATGTAGTTATGAAAACTCACTTGTGCACACACGAAGGCTGGGGGAATAAGTCTTATCCCATCACATCTAATAAAATCTGAAATGTATTAATCAAATATGCACAATTGAGTGTATCAACATTATTTAATGTGAAGATATCAGATCCTGCCGCATTTGAGCTCTAGAATTGTATATATCAAGGCCTAATAGCTTTCTTTTGTTAAACAAAGTACCGATCTATCAGATGAACTGCTTCAGGTGGCCAACAGTGTCTGGTGCTATTCGCTAGATTTGAGTAATGTCTAATTGCCCCATTTTCCCATCACCCAAAGTCCCAAACCCATTCAGCATTTCAGTTCAACCTTTTTAGGCATGCTTGTGTATCCTACCTTTCGGTAGCCTGGTATGTAGTAGTTGAATTCAGTCATGTGCATACTAATGAATACCATATGTGTATCATCTATCTCTGCAATTGTACATTCCTCAAATAGCTTTGATTACATAGTTGATAGGGCTTGTATGTTTTGCTCTTCTGCCGTCTCACTTCAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTTCCAATTGTCTCGTAGCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTTTGACCAGAGAACTTTATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTCAGACATTGTTACGTCAAAAATTCAGAAACTGCAA]

[+] EMBL AK068246             [TTATGGTTGGTTGGTTTTGTCCGCAAGGTTGTATTAAGGAACATTCATATTTTTTAAATGTTTTTTCACCATAATTTTACCTGCCCAACCTTAGCAACATTAGTGATCGTTGTAATTTGTTATCCTGTCAATAATAGAATCCTCATAACAATCCTATATTAGACTTACTATAGTCATTTGTTTCCAAATATGATAGAATTAGTAACATTATGTTGCTAACCATTTCTTTTTGCGCGATTGTCCCGAATACTTTCTAACTAGCATGTTTCTGTTGTTGACCTTTGCAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACACACTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGGTAAACATTGCTTGCTGAGTTTAACTCTAGACATATTTGTTTATTTCTTTACTTTGCTATTGGAAATAGATTTATGATGTGTGTTATCTTTTGGATTTTGACTTTCAGTGGAAGCTTATCATTAGCAATTTAGCATCCATATTTAATCATTTTTCTGGAACTTGCACTTGAATCGCTAAACAACAGGTTTGAAGTTAATTTATGGGTGTTTTAGACTTTGTGTCACATAGGAAAAGTTGTCGCTCATGAAGCGGTAAATAAAATAATTGCAGTCACTGATTCTGAATGTAGTTATGAAAACTCACTTGTGCACACACGAAGGCTGGGGGAATAAGTCTTATCCCATCACATCTAATAAAATCTGAAATGTATTAATCAAATATGCACAATTGAGTGTATCAACATTATTTAATGTGAAGATATCAGATCCTGCCGCATTTGAGCTCTAGAATTGTATATATCAAGGCCTAATAGCTTTCTTTTGTTAAACAAAGTACCGATCTATCAGATGAACTGCTTCAGGTGGCCAACAGTGTCTGGTGCTATTCGCTAGATTTGAGTAATGTCTAATTGCCCCATTTTCCCATCACCCAAAGTCCCAAACCCATTCAGCATTTCAGTTCAACCTTTTTAGGCATGCTTGTGTATCCTACCTTTCGGTAGCCTGGTATGTAGTAGTTGAATTCAGTCATGTGCATACTAATGAATACCATATGTGTATCATCTATCTCTGCAATTGTACATTCCTCAAATAGCTTTGATTACATAGTTGATAGGGCTTGTATGTTTTGCTCTTCTGCCGTCTCACTTCAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTTCCAATTGTCTCGTAGCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTTTGACCAGAGAACTTTATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTCAGACATTGTTACGTCAAAAATTCAGAAACTGCAA]




>consensus_6406#0
TTATGGTTGGTTGGTTTTGTCCGCAAGGTTGTATTAAGGAACATTCATATTTTTTAAATG
TTTTTTCACCATAATTTTACCTGCCCAACCTTAGCAACATTAGTGATCGTTGTAATTTGT
TATCCTGTCAATAATAGAATCCTCATAACAATCCTATATTAGACTTACTATAGTCATTTG
TTTCCAAATATGATAGAATTAGTAACATTATGTTGCTAACCATTTCTTTTTGCGCGATTG
TCCCGAATACTTTCTAACTAGCATGTTTCTGTTGTTGACCTTTGCAGATATTCGTGCTAA
GAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTAT
TTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCA
CCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCG
TCCATACTGACCATACACACTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGC
TGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAG
CTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGT
GTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGT
GCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTA
TATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAAT
ACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAAC
ACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTT
CCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTT
GTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATA
AAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTC
TAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAG
AATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTT
GTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGA
CAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCAT
TACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGC
TAACACATCTGACAGGTGTGAAGCATGCTACATGAACAGGTAAACATTGCTTGCTGAGTT
TAACTCTAGACATATTTGTTTATTTCTTTACTTTGCTATTGGAAATAGATTTATGATGTG
TGTTATCTTTTGGATTTTGACTTTCAGTGGAAGCTTATCATTAGCAATTTAGCATCCATA
TTTAATCATTTTTCTGGAACTTGCACTTGAATCGCTAAACAACAGGTTTGAAGTTAATTT
ATGGGTGTTTTAGACTTTGTGTCACATAGGAAAAGTTGTCGCTCATGAAGCGGTAAATAA
AATAATTGCAGTCACTGATTCTGAATGTAGTTATGAAAACTCACTTGTGCACACACGAAG
GCTGGGGGAATAAGTCTTATCCCATCACATCTAATAAAATCTGAAATGTATTAATCAAAT
ATGCACAATTGAGTGTATCAACATTATTTAATGTGAAGATATCAGATCCTGCCGCATTTG
AGCTCTAGAATTGTATATATCAAGGCCTAATAGCTTTCTTTTGTTAAACAAAGTACCGAT
CTATCAGATGAACTGCTTCAGGTGGCCAACAGTGTCTGGTGCTATTCGCTAGATTTGAGT
AATGTCTAATTGCCCCATTTTCCCATCACCCAAAGTCCCAAACCCATTCAGCATTTCAGT
TCAACCTTTTTAGGCATGCTTGTGTATCCTACCTTTCGGTAGCCTGGTATGTAGTAGTTG
AATTCAGTCATGTGCATACTAATGAATACCATATGTGTATCATCTATCTCTGCAATTGTA
CATTCCTCAAATAGCTTTGATTACATAGTTGATAGGGCTTGTATGTTTTGCTCTTCTGCC
GTCTCACTTCAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATATGTAGACAAAAG
AAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGCTTGCACCTACTTCATCTGATTT
GAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTAC
ATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGG
GTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGC
TTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATG
CTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCA
TACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCT
ACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGG
ATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTG
ATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCAT
TGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTC
GCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCAATGATCA
AGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGA
AGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACAC
CAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGA
TTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTT
CCAATTGTCTCGTAGCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTT
TGACCAGAGAACTTTATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCG
TGTAAACAAAATTCAGACATTGTTACGTCAAAAATTCAGAAACTGCAA

consensusID : consensus_6406#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2553
fasta sequence 
                              [GTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCGTACGCCTCGCCCTCGCCCTCATCTTCGCTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACGTACAAAAGTCGTGCTATATTCAGTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACACAGCTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGA-CAGGTG--TGAAGCATGCTACAT-GA-ACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGGTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGA-TTTCTAGCATTTCCAATTGTCTCGTAGCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTAC-TTTGACCAGAGAAC-TTTATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTCAGACATTGTTACGTCAAAAATTCAGAAACTGCAA]

[+] EMBL AK103849             [GTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCCTCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCGTACGCCTCGCCCTCGCCCTCATCTTCGCTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACGTACAAAAGTCGTGCTATATTCAGTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACACAGCTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGA CAGGTG  TGAAGCATGCTACAT GA ACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGGTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGA TTTCTAGCATTTCCAATTGTCTCGTAGCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTAC TTTGACCAGAGAAC TTTATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTCAGACATTGTTACGTCAAAAATTCAGAAACTGCAA]
[+] EMBL CA766647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gaTAATGAT  TGCAC CT AC TTC ATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTCTCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGCAGACCATGCAGAAGACTTTCTCAGCTGTCATGGCCAGAAGGTTCGCGAGTATGTCCCTGATCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGAGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATCCTGCATCGGTGAGAAGATGAACCGTATCATAGAGATGAATGACACCAAGGAGAACGTAGAGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGATGAAGACGACCCAGATGAGGATATGATTTTCGATTTTCTAGCATTTNCAATTGTCTCGTAGCACTCCTAATCCAGAAATCTNCTATGCTGGGAGAGAGCTTTACTTTTGACCAGAGAACNTTTATNAACACTAACAAnact                                                                           ]




>consensus_6406#1
GTACCGTGGATTCCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCG
AGCTCGGCGGTGACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTC
ATCAACTCGCCGAGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCCCGCC
TCCATCGACGGCGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCGTACG
CCTCGCCCTCGCCCTCATCTTCGCTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGT
TCCTGGAGCTAGATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCT
TAATCACAACTACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAG
AAGACACATCTTCAAGCACAAGATTTACCAAGCTAGTGACCACGTACAAAAGTCGTGCTA
TATTCAGTGGAACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAA
TATTATGGTTGGTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTGTAAGTATTT
CTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGT
TTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATC
CTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCGTCCATACTGACCATACAC
AGCTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTG
TTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGT
GTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAA
CAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTG
AATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTA
TATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTA
TTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCT
ATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGT
TTGATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCA
GACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGAT
TCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTT
TGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATC
TGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTA
CTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAG
ACGTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCCATTACCACATCAAGTATTG
ACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGT
GTGAAGCATGCTACATGAACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTC
ACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAA
AGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTC
TCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTC
TCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGC
AGACCATGCAGAAGACTTTCTCAGGTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGA
TCTCGCAGAATCGATAGCTGGCTTAATCTTATCATCCAATGATCAAGAGTTCCAAGATGA
GTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGATC
CTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAGA
GCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGGA
TGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTTCCAATTGTCTCGTAG
CACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTTTGACCAGAGAACTTT
ATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTCA
GACATTGTTACGTCAAAAATTCAGAAACTGCAA

consensusID : consensus_6406#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 798
fasta sequence 
                              [AATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGATTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGATATCCAGCTTTTGTTTTGTGCATGCTTTCTTTTTTCTAGTGATGGTGTCGCCTGTCTATTTGGCTGTGGATATCTCTGNTGGATTTCCCATCACTGTATTTGGCTATCCTTGACCTGCTGTAGCTACTGCTGNTGATGAATGGAAGAGCTCTCAACCTGNAAGGCATCTTCAAAGAAAGGCACTTAAGTCTGCATTGNTTGGATTGNAAGCAGANCATGCCAGAANACTTTCTCAGCTGNCATGGCCAN]

[+] EMBL CB096442             [AATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGATTGCACCTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCATAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGATGTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAGGTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTACCACGAAGGATATCCAGCTTTTGTTTTGTGCATGCTTTCTTTTTTCTAGTGATGGTGTCGCCTGTCTATTTGGCTGTGGATATCTCTGNTGGATTTCCCATCACTGTATTTGGCTATCCTTGACCTGCTGTAGCTACTGCTGNTGATGAATGGAAGAGCTCTCAACCTGNAAGGCATCTTCAAAGAAAGGCACTTAAGTCTGCATTGNTTGGATTGNAAGCAGANCATGCCAGAANACTTTCTCAGCTGNCATGGCCAN]




>consensus_6406#2
AATATGTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGTGATAATGATTGCAC
CTACTTCATCTGATTTGAGCTGTTGGATGACAAATTGTTCATCTACACAGGTTTGCACCA
TAGGCCTCTAAGTTACATAAACTAATTATGCAATTACATTAGCATACTTGTTCTTGTGAT
GTCTAACTGGTTATGGGTGTAGTATACAAGCAAGAGGGCCTCTTGTGTGGTATATTCTTG
CTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCATGGCGTCCAATGTTTATGCTGAAG
GTGTGGTTCAAGTATGCTCACTGCTTCCACTCAATGGTGAATTGTCTATTGTAGGTTTTG
CATTTTGTAGAGTTCATACCATGTCCAATCTCACAATCCTCCCTCAGTGCGCTGATGAGC
ATAGACTGGCAAAGCTACGGTTTCAAGTTTAAAGGGGGTTTCATTGATGACGATGGAAAT
GCTGAGCTTCAATGGGATAACATGGCATTTTCTCATGTCGATATTGCCATTCACACTTAC
CACGAAGGATATCCAGCTTTTGTTTTGTGCATGCTTTCTTTTTTCTAGTGATGGTGTCGC
CTGTCTATTTGGCTGTGGATATCTCTGNTGGATTTCCCATCACTGTATTTGGCTATCCTT
GACCTGCTGTAGCTACTGCTGNTGATGAATGGAAGAGCTCTCAACCTGNAAGGCATCTTC
AAAGAAAGGCACTTAAGTCTGCATTGNTTGGATTGNAAGCAGANCATGCCAGAANACTTT
CTCAGCTGNCATGGCCAN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6406#0      TTATGGTTGGTTGGTTTTGTCCGCAAGGTTGTATTAAGGAACATTCATATTTTTTAAATG 60
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TTTTTTCACCATAATTTTACCTGCCCAACCTTAGCAACATTAGTGATCGTTGTAATTTGT 120
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TATCCTGTCAATAATAGAATCCTCATAACAATCCTATATTAGACTTACTATAGTCATTTG 180
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TTTCCAAATATGATAGAATTAGTAACATTATGTTGCTAACCATTTCTTTTTGCGCGATTG 240
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TCCCGAATACTTTCTAACTAGCATGTTTCTGTTGTTGACCTTTGCAGATATTCGTGCTAA 300
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      GAGCATCTGTAAGTATTTCTGAACTTTTTTCTCTAGTTGTAACCAGTGTGTTCTTCCTAT 360
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TTTCTTTGTTCACTATGTTTTTTTTCCATATTTCATAATGACTGATCATATTTATACTCA 420
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      CCATTAATCCCTTTAATCCTGAGTCCTTAATCCTCAAGTCAAAATGCCAAATGCTATTCG 480
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TCCATACTGACCATACACACTGGTGCTATTGTGTGTCTATCTCTTAGCAGCGGGTGATGC 540
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TGTTCTCTGAGGATGTGTTTTTCTTGTTAGAATAACTGTGTCATTTACAAAGCCTTCTAG 600
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      CTTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAGTACATTATCCCGTATCATGT 660
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      GTGGCGTACTGCTCTAACAACAGTACATTTCATGCCACTTATATCATCTAAATCGAATGT 720
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      GCAGATTGCATTATGTGAATACTTTTTCACACACTGCAGGACATGTTTGATGTATTTCTA 780
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      TATGTGTTCCCGTTTTATATGGAGTCTCATACCTTTGTGCATGATGTGCAAAATGAAAAT 840
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      ACATGTTCCTGTATTTATTTATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAAC 900
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------------------
                                                                                  

consensus_6406#0      ACGGTGTTCATTGGTCTATGCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTT 960
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ------------------------------------------------GTACCGTGGATT 12
                                                                                  

consensus_6406#0      CCTACAGATGCATTTGTTTGATAAGTTCTTAACAGCC-ATCTGATATCATATCACCAATT 1019
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      CCACCGGCGGCGCAGAGCCGGAGACCGGAGGGCGGCGGAACTCCGGCGAGCTCGGCGGTG 72
                                                                                  

consensus_6406#0      TGTCTGCCTGCATTTTCAGACCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATAT 1079
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ACCGACGGTGGAAGGAAGGTGCATTGTTCGTCAGTACACCAAGCTCTCATCAACTCGCCG 132
                                                                                  

consensus_6406#0      AAAACTGATGATCATGATTCATCCTCAGTACTTGGTTACATTCCATTCCTCCGAACATGT 1139
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      AGCGCTTCCCCTCCCTCCGCTCCATCCATCCATGGCGTCCTCCC-CGCCTCCATCGACGG 191
                                                                                  

consensus_6406#0      CTAATTTTACTTTGTGTTTGCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTA 1199
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      CGTCCCCCACCTCCTCCTCGCCCTACCGGAAGCTCCTCCACTCCGTACGCCTCGCCCTCG 251
                                                                                  

consensus_6406#0      GAATTAGAAGCATCTATCTGCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGT 1259
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      CCCTCATCTTCGCTTTCAGATACTGGAGTTGGGAGCAAGCTGGAGGAGTTCCTGGAGCTA 311
                                                                                  

consensus_6406#0      TGTTTGATTTCTTTTGTACTACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAG 1319
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GATGCATTGGCGCGTGAGACCCCCGTGGAGAAATGGGATGGTACCCTCTTAATCACAACT 371
                                                                                  

consensus_6406#0      ACAGTGCTGGATCAGGAGAC-GTTTGTCTGTCACAAGATTCTGATGATGTCCATATTTCC 1378
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ACAGGAATCGATGACAAAGCTATTTATCGTTATCAATTTAATCTTCAAGAAGACACATCT 431
                                                                                  

consensus_6406#0      ATTACCACATCAAGTATTGACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACAT 1438
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TCAAGCACAAGATTTACCAAGCTAGTGACCACGTACAAAAGTCGTGCTATATTCAGTGGA 491
                                                                                  

consensus_6406#0      GCTAACACAT---CTGACAGGTGTGAAGCATGCTACATGAACAGGTAAACATTGC--TTG 1493
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ACTGAAGTATGCCTTTGCCTGCCAACTGAAGCTGATGTTGATGACTTAATATTATGGTTG 551
                                                                                  

consensus_6406#0      CTGAGTTTAACTCTAGACATATTTGT-TTATTTCTTTACTTTGCTATTGGAAATAGATTT 1552
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GTTGGTTTTGTCCGCAAGATATTCGTGCTAAGAGCATCTGTAAGTATTTCTGAACTTTTT 611
                                                                                  

consensus_6406#0      ATGATGTGTGTTATCTTTTGGATTTTGACTTTCAGTGGAAGCTTATCATTAGCAATTTAG 1612
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TCTCTAGTTGTAACCAGTGTGTTCTTCCTATTTTCTTTGTTCACTATGTTTTTTTTCCAT 671
                                                                                  

consensus_6406#0      CATCCATATTTAATCATTTTTCTGGAACTTGCACTTGAATCGCTAAACAACAGGTTTGAA 1672
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ATTTCATAATGACTGATCATATTTATACTCACCATTAATCCCTTTAATCCTGAGTCCTTA 731
                                                                                  

consensus_6406#0      GTTAATTTATGGGTGTTTTAGACTTTGTGTCACATAGGAAAAGTTGTCGCTCATGAAGCG 1732
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ATCCTCAAGTCAAAATGCCAAATGCTAT-TCGTCCATACTGACCATACACAGCTGGTGCT 790
                                                                                  

consensus_6406#0      GTAAATAAAATAATTGCAGTCACTGATTCTGAATGTAGTTATGAAAACTCACTTGTGCAC 1792
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ATTGTGTGTCTATCTCTTAGCAGCGGGTGATGCTGTTCTCTGAGGATGTGTTTTTCTTGT 850
                                                                                  

consensus_6406#0      ACACGAAGGCTGGGGGAATAAGTCTTATCCCATCACATCTAATAAAATCTGAAATGTATT 1852
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TAGAATAACTGTGTCATTTACAAAGCCTTCTAGCTTATCCCGTATCATGTGTGGCGTACT 910
                                                                                  

consensus_6406#0      AATCAAATATGCACAATTGAGTGTATCAACATTATTTAATGTGAAGATATCAGATCCTGC 1912
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GCTCTAA----CAACAGTACATTATCCCGTATCATGTGTGGCGTACTGCTCTAACAACAG 966
                                                                                  

consensus_6406#0      CGCATTTGAGCTCTAGAATTGTATATATCAAGGCCTAATAGCTTTCTTTTGTTAAACAAA 1972
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TACATTTCATGCCACTTATATCATCTAAATCGAATGTGCAGATTGCATTATGTGAATACT 1026
                                                                                  

consensus_6406#0      GTACCGATCTATCAGATGAACTGCTTCAGGTGGCCAACAGTGTCTGGTGCTATTCGCTAG 2032
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TTTTC-ACACACTGCAGGACATGTTTGATGTATTTCTATATGTGTTCCCGTTTTATATGG 1085
                                                                                  

consensus_6406#0      ATTTGAGTAATGTCTAATTGCCCCATTTTCCCATCACCCAAAGTCCCAAACCCATTCAGC 2092
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      AGTC---TCATACCTTTGTGCATGATGTGCAAAATGAAAATACATGTTCCTGTATTTATT 1142
                                                                                  

consensus_6406#0      ATTTCAGTTCAACCTTTTTAGGCATGCTTGTGTATCCTACCTTTCGGTAGCCTGGTATGT 2152
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TATTTACTTCTGAAAATTCACAAATACAAAAGTAACAAAACACGGTGTTCATTGGTCTAT 1202
                                                                                  

consensus_6406#0      AGTA---GTTGAATTCAGTCATGTGCATACTAATGAATACCATATGTGTATCATCTATCT 2209
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GCTACAGGGCAAAACAACTGAAAACCCTAATATTGGAGTTTCCTACAGATGCATTTGTTT 1262
                                                                                  

consensus_6406#0      CTGCAATTGTACATTCCTCAAATAGCTTTGATTACATAGTTGATAGGGCTTGTATGTTTT 2269
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GATAAGTTCTTAACAGCCATCTGATATCATATCACCAATTTGTCTGCCTGCATTTTCAGA 1322
                                                                                  

consensus_6406#0      GCTCTTCTGCCGTCTCACTTCAGAGATCGCCTGAAGATTGGAACTGGAACAGCAAAATAT 2329
consensus_6406#2      -------------------------------------------------------AATAT 5
consensus_6406#1      CCAACAATATTGTGTATCCTGAGATGTAATTAAAGGATATAAAACTGATGATCATGATTC 1382
                                                                              **  

consensus_6406#0      GTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGT--GATAATGCTT-GCACCT 2386
consensus_6406#2      GTAGACAAAAGAAAAGCTAAAGGGCAACTTGTTGAAGTAGT--GATAATGATT-GCACCT 62
consensus_6406#1      ATCCTCAGTACTTG-GTTACATTCCATTCCTCCGAACATGTCTAATTTTACTTTGTGTTT 1441
                       *   **  *     * ** *   **       ***   **   **  *  ** *    *

consensus_6406#0      ACTT-CATCTGATTTGAGCTGTTGGATGACAAATTGTTC-------------ATCTACAC 2432
consensus_6406#2      ACTT-CATCTGATTTGAGCTGTTGGATGACAAATTGTTC-------------ATCTACAC 108
consensus_6406#1      GCATATGTCCAGTTTTAGTTGTTGCACAGTAAACAGGCCTAGAATTAGAAGCATCTATCT 1501
                       * *   **   *** ** ***** *    ***  *  *             *****   

consensus_6406#0      AGGTTTGCACCATAGGCCTCTAA-GTTACATA--AACTAATTATGCAATTACATTAGCA- 2488
consensus_6406#2      AGGTTTGCACCATAGGCCTCTAA-GTTACATA--AACTAATTATGCAATTACATTAGCA- 164
consensus_6406#1      GCTTTTACTCTGTTTTTTCTTATTGTGACCTCTTAAATGGTTGTTTGATTTCTTTTGTAC 1561
                         *** * *  *       **  ** ** *   ** *  ** *   *** * ** * * 

consensus_6406#0      TACTTG---TT---CTTGTGATGTCTA-ACTGGTTATGGGTGTAGTATACAAGCAAGAGG 2541
consensus_6406#2      TACTTG---TT---CTTGTGATGTCTA-ACTGGTTATGGGTGTAGTATACAAGCAAGAGG 217
consensus_6406#1      TACTCAGAATTTAGCATGTGAGCTCTTTGTTGCGCAAACAGACAGTGCTGGATCAGGAGA 1621
                      ****     **   * *****  ***    **   *       ***     * ** *** 

consensus_6406#0      GCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCAT 2601
consensus_6406#2      GCCTCTTGTGTGGTATATTCTTGCTTGTATTTAGTAAGCTTATAAAAGTTATAACAGCAT 277
consensus_6406#1      CGTTTGTCTGTCACAAGATTCTGATGATGTCCA-TATTTCCATTACCACATCAAGTATTG 1680
                         *  * ***   *   *  ** *  * *  * **     ** *       **      

consensus_6406#0      GGCGTCCAATGTTTATGCTGAAGG--TGTG-GTTCAAGTATGCTCACTGCTTCCACTCA- 2657
consensus_6406#2      GGCGTCCAATGTTTATGCTGAAGG--TGTG-GTTCAAGTATGCTCACTGCTTCCACTCA- 333
consensus_6406#1      ACCGTCTAGTTTCTGGCCTTAAAGATTATGCACTCTCACATGCTAACACATCTGACAGGT 1740
                        **** * * * *   ** ** *  * **   **    ***** **   *   **    

consensus_6406#0      ATGGTGAATTGTCTATTG-TAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTC 2716
consensus_6406#2      ATGGTGAATTGTCTATTG-TAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTC 392
consensus_6406#1      GTGAAGCATGCTACATGAACAGGTTTTGCATTTTGTAGAGTTCATACCATGTCCAATCTC 1800
                       **  * **  *  **    ****************************************

consensus_6406#0      ACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAA 2776
consensus_6406#2      ACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAA 452
consensus_6406#1      ACAATCCTCCCTCAGTGCGCTGATGAGCATAGACTGGCAAAGCTACGGTTTCAAGTTTAA 1860
                      ************************************************************

consensus_6406#0      AGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTC 2836
consensus_6406#2      AGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTC 512
consensus_6406#1      AGGGGGTTTCATTGATGACGATGGAAATGCTGAGCTTCAATGGGATAACATGGCATTTTC 1920
                      ************************************************************

consensus_6406#0      TCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTC 2896
consensus_6406#2      TCATGTCGATATTGCCATTCACACTTACCACGAAGGATATCCAGCTTT-------TGTTT 565
consensus_6406#1      TCATGTCGATATTGCCATTCACACTTACCACGAAGGTGCTGTTGATGAATGGAAGAGCTC 1980
                      ************************************   *   * *          * * 

consensus_6406#0      TCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGC 2956
consensus_6406#2      TGTGCATGCTTTCTTTTTTCTAGTGATGGTGTC---GCCTGT-CTATTTGGCT-----GT 616
consensus_6406#1      TCAACCTGAAAGGCATCTTCTAAGAAAGGCACTTAAGTCTGCATTGTTTGGATTGAAAGC 2040
                      *   * **       * *****   * **       * ***   * ***** *     * 

consensus_6406#0      AGACCATGCAGAAGACTTTCTCAGCTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGA 3016
consensus_6406#2      GGATATCTCTGNTGGATTTCCCA-TCACTGTATTTGGCTA--TCCTTGACCTGCTGTAGC 673
consensus_6406#1      AGACCATGCAGAAGACTTTCTCAGGTGCCATGGCCAGAAGGTTCGCGAGTATGTCCCTGA 2100
                       **     * *  *  **** **    *  *     *     **       **     * 

consensus_6406#0      TCTCGCAGAATCGATAGCTGGCTTAA-TCTTATCATC-AATGATCAAGAGTTCCAAGATG 3074
consensus_6406#2      TACTGCTGN--TGATGAATGGAAGAGCTCTCAACCTG-NAAGGC---ATCTTCAAAGAAA 727
consensus_6406#1      TCTCGCAGAATCGATAGCTGGCTTAA-TCTTATCATCCAATGATCAAGAGTTCCAAGATG 2159
                      *   ** *    ***   ***   *  *** * * *   * *        *** ****  

consensus_6406#0      AGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGAT 3134
consensus_6406#2      GGCACTTAAGTCTGCATTGNTTGGATTGNAAGCAGANCATGCCAGAANACTTTCTCAGCT 787
consensus_6406#1      AGTGCATCGCTCTTCTCGGCCTAGGCTCAGATCAAGATCTCACAGAAGGGGCGGTTAGAT 2219
                       *  * *   *** *   *  * *  *   * **     *  *****       * ** *

consensus_6406#0      CCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAG 3194
consensus_6406#2      GNCATGGCCAN------------------------------------------------- 798
consensus_6406#1      CCTGCATCGGTGAGAAGATGAACCGTATCGTAGAGATGAATGACACCAAGGAGAACGTAG 2279
                             *                                                    

consensus_6406#0      AGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGG 3254
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      AGCACAACGCACCTTATCTGTTCGAGTGCGAGAGGTTCGATGAAGATTATAGCCTACTGG 2339
                                                                                  

consensus_6406#0      ATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTTCCAATTGTCTCGTA 3314
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      ATGAAGACGACCCAGATGAGGATATGATTTTCGATTTCTAGCATTTCCAATTGTCTCGTA 2399
                                                                                  

consensus_6406#0      GCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTTTGACCAGAGAACTT 3374
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      GCACTCCTAATCCAGAGATCTCCTATGCTGTGAGAGAGCTTTACTTTGACCAGAGAACTT 2459
                                                                                  

consensus_6406#0      TATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTC 3434
consensus_6406#2      ------------------------------------------------------------
consensus_6406#1      TATAAACACTAACAAAGACTGCTCTCTGAGACTGTTTCCTGCCTCGTGTAAACAAAATTC 2519
                                                                                  

consensus_6406#0      AGACATTGTTACGTCAAAAATTCAGAAACTGCAA 3468
consensus_6406#2      ----------------------------------
consensus_6406#1      AGACATTGTTACGTCAAAAATTCAGAAACTGCAA 2553


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)