cluster # 6445

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Oryza sativa
cluster # 6445 cluster # 6445 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6445#0 length = 725 sequences # 4

consensusID : consensus_6445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 725
fasta sequence

                              [AACTAAGCTTCCTCGATATCAAGGAATCGACTGGTATTGAGGATAAAGAATTGCGAAGAACGCTGCAATCACTTGCATGCGGTAAAGTTCGGGTTCTCCAAAAGATGCCAAAAGGGCGAGACGTAGAAGATAAGGACGAATTTGTATTTAATGAAGAATTTAGTGCCCCTCTCTATCGCATAAAGGTGAATGCTATTCAGATGAAGGAGACGGTTGAAGAAAACACAAGCACAACTGAGAGAGTATTCCAGGACAGACAGTATCAGGTGGATGCTGCCATAGTTCGAATAATGAAGACACGTAAAACCCTCAGCCACACGCTTCTAATAACTGAGCTTTTTCAGCAGCTCAAGTTCCCAATCAAGCCATCGGATATCAAGAAAAGAATAGAGAGCCTAATCGACAGGGAGTACCTGGAGAGAGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGACAGCGCTTGCCATCATAACATGAAAGCTCGTCGTCTTCATTTCATTGTCAGAGACATTGTAAAGTAGTAATTGAATATGTCTACCTCTTGTTTTTCCGACCTTTTTCTCCTTGGAAGCTGTAGCAATCGCAACATTTCTGTATACA-AGAAAAATGAATTTTCGATAATATCAGCCATGCATCATGCNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK059186             [AACTAAGCTTCCTCGATATCAAGGAATCGACTGGTATTGAGGATAAAGAATTGCGAAGAACGCTGCAATCACTTGCATGCGGTAAAGTTCGGGTTCTCCAAAAGATGCCAAAAGGGCGAGACGTAGAAGATAAGGACGAATTTGTATTTAATGAAGAATTTAGTGCCCCTCTCTATCGCATAAAGGTGAATGCTATTCAGATGAAGGAGACGGTTGAAGAAAACACAAGCACAACTGAGAGAGTATTCCAGGACAGACAGTATCAGGTGGATGCTGCCATAGTTCGAATAATGAAGACACGTAAAACCCTCAGCCACACGCTTCTAATAACTGAGCTTTTTCAGCAGCTCAAGTTCCCAATCAAGCCATCGGATATCAAGAAAAGAATAGAGAGCCTAATCGACAGGGAGTACCTGGAGAGAGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGACAGCGCTTGCCATCATAACATGAAAGCTCGTCGTCTTCATTTCATTGTCAGAGACATTGTAAAGTAGTAATTGAATATGTCTACCTCTTGTTTTTCCGACCTTTTTCTCCTTGGAAGCTGTAGCAATCGCA                                                                                                                                      ]
[+] EMBL CF330277             [                                                                                                                                                                                                                                                                                                                                                                                                                                     AGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGACAGCGCTTGCCATCATAACATGAAAGCTCGTCGTCTTCATTTCATTGTCAGAGACATTGTAAAGTAGTAATTGAATATGTCTACCTCTTGTTTTTCCGACCTTTTTCTCCTTGGAAGCTGTAGCAATCGCAACATTTCTGTATACA AGAAAAATGAATTTTCGATAATATCAGCCATGCATCATGCNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU174323             [                                                                                                                                                                                                                                                                                                                                                                                                                                              TAACCCCCAGATTTACAATTACCTGGNTTGACAGCGCTTGCCATCATAACATGAAAGCTCGTNGTNTTCATTTCATTGTCANAGACATTGTAAAGTAGTAATTGAATATGTNTACCTNTTGTTTTTCCGACCTTTTTTTCCTTGGAANCTGTAGCAATNGCAACATTTTTGTATACA ANAAAAATGAATTTTNGATAATATCAGCCATGCATCATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                ]
[+] EMBL CF329403             [                                                                                                                                                                                                                                                                                                                                                                                                                                              TAACCCCCAGATCTACAATTACCTGGCTTGACAGCGCTTGCCATCATAACATGAAAGCTCGTCGTCTTCATTTCATTGTCAGAGACATTGTAAAGTAGTAATTGAATATGTCTACCTCTTGTTTTTCCGACCTTTTTCTCCTTGGAAGCTGTAGCAATCGCAACATTTCTGTATACAGAGAAAAATGAATTTTCGATAATATCAGCC                                                                                         ]




>consensus_6445#0
AACTAAGCTTCCTCGATATCAAGGAATCGACTGGTATTGAGGATAAAGAATTGCGAAGAA
CGCTGCAATCACTTGCATGCGGTAAAGTTCGGGTTCTCCAAAAGATGCCAAAAGGGCGAG
ACGTAGAAGATAAGGACGAATTTGTATTTAATGAAGAATTTAGTGCCCCTCTCTATCGCA
TAAAGGTGAATGCTATTCAGATGAAGGAGACGGTTGAAGAAAACACAAGCACAACTGAGA
GAGTATTCCAGGACAGACAGTATCAGGTGGATGCTGCCATAGTTCGAATAATGAAGACAC
GTAAAACCCTCAGCCACACGCTTCTAATAACTGAGCTTTTTCAGCAGCTCAAGTTCCCAA
TCAAGCCATCGGATATCAAGAAAAGAATAGAGAGCCTAATCGACAGGGAGTACCTGGAGA
GAGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGACAGCGCTTGCCATCATAAC
ATGAAAGCTCGTCGTCTTCATTTCATTGTCAGAGACATTGTAAAGTAGTAATTGAATATG
TCTACCTCTTGTTTTTCCGACCTTTTTCTCCTTGGAAGCTGTAGCAATCGCAACATTTCT
GTATACAAGAAAAATGAATTTTCGATAATATCAGCCATGCATCATGCNNAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA

clustalw multiple alignements is not computed in this case