These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2026 fasta sequence [CACAAGCTTACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC-AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCT-CCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCG-CCCCGACGATGCTCGTGACATTG-TCG-CGCGTCG-CCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCAT-CGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGG-CCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCC-GGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTTATTTCCCCCGAAAAAAAAAAAA] [+] EMBL CB656395 [CACAAGCTTACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAG GGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTC ] [+] EMBL OSS14879A [ AGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCG CTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCNGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGNATCCTAGACCTTGCTTGGCAATTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTG ] [+] EMBL AK103170 [ GGCTTCTTTTTGACCTCGTTCCCTACCCCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCT CCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCG CCCCGACGATGCTCGTGACATTG TCG CGCGTCG CCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCAT CGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGG CCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCC GGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTT ] [+] EMBL AU089766 [ AAGNTCCCCCGTGGACGAA TGCCGATCATCTCCTTCCACACCGAGGCCAGCACCGCCCCCGACGATGCTCGTGACATTGTTCGCCGCGTCGCCCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCATCCGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGGCCCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAAGGTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGA GTGCCCGGGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTTATTTCCCCCGAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||