cluster # 6463

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6463 cluster # 6463 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6463#0 length = 594 sequences # 4

consensusID : consensus_6463#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 594
fasta sequence

                              [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT-CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG-CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT-CAAA-TGAAGCAATCCAGT-GAGCAAAGAGGAGCTAGCTCAATGT-CAGGAGGAGCTTGGC-TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA]

[+] EMBL AU029909             [ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTCGCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCAT CGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAATCCAAATTGAAGCAATCCAGTGGACCAAAGAGGAGCTAACNCCATGTCCAGGAGGACCTTTGCTTGTTT NAACATCCGGGGGTTCCA                                                                                                                                                                                                                                      ]
[+] EMBL AU081339             [                                                                                                   GGAGGTCTTCATCCGACGGAGATGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTTCTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAGCCCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAACAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTAaaaaaa                                                     ]
[+] EMBL CF330362             [                                                                                                                                                                                          AAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAA ]
[-] EMBL CF330363             [                                                                                                                                                                                           AGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAACGCAG CCGAGCCGGGAGTTCAATCTGGTTACTGCAGTTAGAAT CAAA TGAAGCAATCCAGT GAGCAAAGAGGAGCTAGCTCAATGT CAGGAGGAGCTTGGC TGTTTGAAACAATCGGGGGATGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCACAAAATCGTTAGGTGAAAAAAATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTTTTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACTGCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA]




>consensus_6463#0
ATCGGGGAAAGAGGAGGCGATCTCGCCGCGCCGTCGAGCTGGGGATTTCTCCGCGCCGTC
GCGCGGCGCCGAAGCGACGAGTAGGCGGTTCACTGGTGAGGAGGTCTTCATCGACGGAGA
TGTTGCATTTGCTAGATTTGTGGTTTTGTTTTTGTGTTTGAAGCGCCGATCTGGTGATTT
CTTCTAAGGTTGATGTGATGGAAAAAGTTGGAAATTTGGAGGAAAAGTTTGGAACTAAAC
GCAGCCGAGCCAGGAGTTCAATCTGGTTACTGCAGTTAGAATCAAATGAAGCAATCCAGT
GAGCAAAGAGGAGCTAGCTCAATGTCAGGAGGAGCTTGGCTGTTTGAAACAATCGGGGGA
TGCAAGGGGTGGATTCATAAGGTCGAGTTGTTTCAAATCTGTTGACAAAAAAATGCCGCA
CAAAATCGTTAGGTGAAATTGATGTTCTGATTAATTTTCAAGTTCCCATATCAGTTAGTT
TTGAATTGGAGAAATTCAGAAATTTAAAGTTACTTCATGTTTGATATCTGAATTATCACT
GCAGTACTCTAGCTCTGAATCTTGAAGCTGTCATGTTGTCTAAAATTTAAAAAA

clustalw multiple alignements is not computed in this case