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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6466 cluster # 6466       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6466#0 length = 806 sequences # 4  

consensusID : consensus_6466#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 806
fasta sequence
                              [CTCAGAGAGAGCCAGCCTCCGGTGGAGGAAAAGCTCAAGAAGTCCACCACCACTTCGCGAAACCCCAATTCCAACCCGACTTCTCCACTCCACGAAGAGAGCCAGCTCCGCCGCCTTCACCATGGCGTCCGTCTGGTGCCTCTCGGCCTCGGCCTCCGCCGCTGCGCCGGTGGCGGCGGCGGCGGCGGCGCCCGGGCCCCTCGGGGCCTCGGTGGCCTCCGTCTCCCTCGCGCGGGCGGCGGTCCCCTCGAGGAGGCGGCGAAGATGGGACGCGCTCGTGGTGTGCGCGGCCCCCGACGAGGAGAAGATTACGCGGCGGTCGCCCCTCGATTTTCCCATCGAATGGGAGAAACCAAAGCCTGGGAGGAGGCCTGATATCTTCCCAAAATTCAGCCCTATGAAAACACCATTGCCCCATCCATTGCCAGCTGATGATCCTCTGGATGATGATGAGGAGGAGGAAGAGGAAGAACCACAACCTCAGGAGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGACAAGCCAACGGAGTAATTTTGGATGATGTGGGTTATGTTAGATAAAAACACTATGTTTAGATCTGCCATATCCTTGAGAGAACGTCATAGGTCTCAGGGTCAGGTTTGACCTGTTAGTTCTGCCGGCTCATATAGGCTGTAGACACGTTTGTTTTGGGAGCA-CCCCTGAGCTTTTCTAAAGCCATGGAAGTTTTGTCTGACTGATCACAAATATGCAATGTTATATTTCTGCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK061591             [CTCAGAGAGAGCCAGCCTCCGGTGGAGGAAAAGCTCAAGAAGTCCACCACCACTTCGCGAAACCCCAATTCCAACCCGACTTCTCCACTCCACGAAGAGAGCCAGCTCCGCCGCCTTCACCATGGCGTCCGTCTGGTGCCTCTCGGCCTCGGCCTCCGCCGCTGCGCCGGTGGCGGCGGCGGCGGCGGCGCCCGGGCCCCTCGGGGCCTCGGTGGCCTCCGTCTCCCTCGCGCGGGCGGCGGTCCCCTCGAGGAGGCGGCGAAGATGGGACGCGCTCGTGGTGTGCGCGGCCCCCGACGAGGAGAAGATTACGCGGCGGTCGCCCCTCGATTTTCCCATCGAATGGGAGAAACCAAAGCCTGGGAGGAGGCCTGATATCTTCCCAAAATTCAGCCCTATGAAAACACCATTGCCCCATCCATTGCCAGCTGATGATCCTCTGGATGATGATGAGGAGGAGGAAGAGGAAGAACCACAACCTCAGGAGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGACAAGCCAACGGAGTAATTTTGGATGATGTGGGTTATGTTAGATAAAAACACTATGTTTAGATCTGCCATATCCTTGAGAGAACGTCATAGGTCTCAGGGTCAGGTTTGACCTGTTAGTTCTGCCGGCTCATATAGGCTGTAGACACGTTTGTTTTGGGAGCA CCCCTGAGCTTTTCTAAAGCCATGGAAGTTTTGTCTGACTGATCACAAATATGCAATGTTAT                                          ]
[+] EMBL BI813179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGACAAGCCAACGGAGTAATTTTGGATGATTTGGGTTATGTTAGATAAAAACACTATGTTTAGATCTGCCATATCCTTGAGAGAACGTCATAGGTCTCCAGGTCAGGTTTGACCTGTTAGTTCT CCGGCTCATATA GCTGTAGACAC TTT TTTTGGGAGCACCCCCTGAGCTTTTCTAAAGCCATGGAAGTTTTGTCTGACTGATCAC AATATGC ATGTTATATTTCTGCAGAAAAAAAAAA                      ]
[+] EMBL CF330392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCCTGAGCTTTTCTAAAGCCATGGAAGTTTTGTCTGACTGATCACAAATATGCAATGTTATATTTCTGCNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA   ]
[-] EMBL CF330393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCCTGAGCTTTTTTAAAGCCATGGAAGTTTTGTTTGACTGATCCCAAATATGCAATGTTATATTTTTGCAGAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAA]


>consensus_6466#0 CTCAGAGAGAGCCAGCCTCCGGTGGAGGAAAAGCTCAAGAAGTCCACCACCACTTCGCGA AACCCCAATTCCAACCCGACTTCTCCACTCCACGAAGAGAGCCAGCTCCGCCGCCTTCAC CATGGCGTCCGTCTGGTGCCTCTCGGCCTCGGCCTCCGCCGCTGCGCCGGTGGCGGCGGC GGCGGCGGCGCCCGGGCCCCTCGGGGCCTCGGTGGCCTCCGTCTCCCTCGCGCGGGCGGC GGTCCCCTCGAGGAGGCGGCGAAGATGGGACGCGCTCGTGGTGTGCGCGGCCCCCGACGA GGAGAAGATTACGCGGCGGTCGCCCCTCGATTTTCCCATCGAATGGGAGAAACCAAAGCC TGGGAGGAGGCCTGATATCTTCCCAAAATTCAGCCCTATGAAAACACCATTGCCCCATCC ATTGCCAGCTGATGATCCTCTGGATGATGATGAGGAGGAGGAAGAGGAAGAACCACAACC TCAGGAGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGA CAAGCCAACGGAGTAATTTTGGATGATGTGGGTTATGTTAGATAAAAACACTATGTTTAG ATCTGCCATATCCTTGAGAGAACGTCATAGGTCTCAGGGTCAGGTTTGACCTGTTAGTTC TGCCGGCTCATATAGGCTGTAGACACGTTTGTTTTGGGAGCACCCCTGAGCTTTTCTAAA GCCATGGAAGTTTTGTCTGACTGATCACAAATATGCAATGTTATATTTCTGCAGAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)