Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6488 cluster # 6488       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6488#0 length = 259 sequences # 4  
consensusID : consensus_6488#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 259
fasta sequence 
                              [TTTGATGAACTTTCCACTGCCCATTCCGTGACAGCAATTCGCAAG-GAAACAAAAGATAAAGTCTAATATATTCAGTACTATACTAGCTAGCACTGCTGATAAATTGGCCC-ATTTTACAAGTAGCTCAGGTATATGATCTGAAGTTGGAATGTTGCTGGCCCAACCCACACTGCTAAGTGCTACTGCTACACCAGTAAGTAGAATTGGCCCGTCATAATTCAGAAGACAAATCAACCAAACTGGCTGATTACAACAGAAG]

[+] EMBL CB964827             [TTNGATGAACTTTCCACTGCCCATTCCGTGACAGCAATTCGCAAG GAAACAAAAGATAAAGTCTAATATATTCAGTACTATACTAGCTAGCACTGCTGATAAATNGGCCCNATTTTACAAGTAGCTCAGGTA                                                                                                                                ]
[+] EMBL CB966788             [TTTGATGAACTTTCCACTGCCCATTCCGTGACAGCAATTCGCAAGNGAAACAAAAGATAAAGTCTAATATATTCA                                                                                                                                                                                          ]
[+] EMBL CB966713             [ TTGATGAAC TTCCACTGCCCATTCCGTGACAGCAA NCGCAAG GAAACAAAAGATAAAGTCTAATATATTCAGTACTATACTAGCTAGCACTGCTGATAAATTGGCCC ATTTTACAAGTAGCTCAGGTATATGATCTGAAGTTGGAATGTTGCTGGCCCAACCCACACTGCTAAGTGCTACTGCTACACCAGTAAGTAGAATTGGCCCGTCATAATTCAGAAGACAAATCAACCAAACTGGCTGATTACAACAGAAG]
[+] EMBL BU673570             [  TGATGAACTTTCCACTGCCCATTCCGTGACAGCAATTCGCAAG GAAACAAAAGATAAAGTCTAATATATTCAGTACTATACTAGCTAGCACTGCTGATAAATTGGCCC ATTTTACAAGTAGCTCAGGTATATGATCTGAAGTTGGAATGTTGCTGGCCCAACCCACACTGCTAAGTGCTACTGCTACACCAGTAAGTAGAATTGGCCCGTCATAATTCAGAAGACAAATCAACCAAACTGGCTGATTACAACAGAAG]




>consensus_6488#0
TTTGATGAACTTTCCACTGCCCATTCCGTGACAGCAATTCGCAAGGAAACAAAAGATAAA
GTCTAATATATTCAGTACTATACTAGCTAGCACTGCTGATAAATTGGCCCATTTTACAAG
TAGCTCAGGTATATGATCTGAAGTTGGAATGTTGCTGGCCCAACCCACACTGCTAAGTGC
TACTGCTACACCAGTAAGTAGAATTGGCCCGTCATAATTCAGAAGACAAATCAACCAAAC
TGGCTGATTACAACAGAAG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)