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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6494 cluster # 6494       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6494#0 length = 960 sequences # 4  

consensusID : consensus_6494#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 960
fasta sequence
                              [ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGCAATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGTGGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGCAGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGGGAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATTTCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCATGCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTTCCTCGAGAATGCAAATATCGCTGTCGCTGGGT-CGTTTGCACGGCT-CCTG-TTTTACCCTCTCTTCTACGGTTGCCT-CCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCC-TGACATGTCTTCTTGGATTCACC-AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC-CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT-CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT-----AATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA]

[+] EMBL AK059439             [ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGCAATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGTGGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGCAGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGGGAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATTTCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCATGCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTTCCTCGAGAATGCAAATATCGCTGTCGCTGGGT CGTTTGCACGGCT CCTG TTTTACCCTCTCTTCTACGGTTGCCT CCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCC TGACATGTCTTCTTGGATTCACC AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACAGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT     AATGCCATCCTCTGTCCATAGTAACA                                                        ]
[+] EMBL BI809545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATATC CTGTCGCTGGTTCCTTTTGCGAGGCTCCCTGTTTTTACCCTCTCTTCTACGGTTGCCTCCCATGGACCCAGCTTCTTCCGCACCGAGATCCCAGTGACCATCCGTGACATGTCTTCTTGGACTCACCAAATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCCGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTGGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACACACC AACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTCATGGAATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAA                                        ]
[+] EMBL AU172850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CC TGACATGTCTTCTTGGATTCACC AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT     AATGCCATCCTCTGTCCATAGTAACATTCACAGCTCATATGAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA]
[+] EMBL BI809224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGCATCCTCATGACCCTCGCGCCACAA GCTGTGCCAATCCAACACTCCGAGACACCCGGGATAGTCATAGT CTGTTCCCTTGTGCCTGGCCTGTTC TTGGTTCATTTGTTGCTT GTTTTTGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACACACCAAACGCCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTCATGGAATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAA                                        ]


>consensus_6494#0 ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGC AATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGT GGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGC AGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGG GAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATT TCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCAT GCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTT CCTCGAGAATGCAAATATCGCTGTCGCTGGGTCGTTTGCACGGCTCCTGTTTTACCCTCT CTTCTACGGTTGCCTCCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCCT GACATGTCTTCTTGGATTCACCAATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTTCCTTGT CGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTC CTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTAT TTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCT AGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTAATGCCATCCTCTGTCCATAGT AACATTCACAGCTCAAAAAAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)