Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6495 cluster # 6495       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6495#0 length = 818 sequences # 4  
consensusID : consensus_6495#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 818
fasta sequence 
                              [AATCCGCCTCCACTCCCCCTCCCTTCCCGAGGAAACCCCCACCTTGCATGGCCAAGCGCCTCCCGGCCGACGGCCTCGCCGCCATCCGCGCCGCGCTCCGCCCCTCCGCCCGCGGCCTCCGATCCCGCTCCTCCCAAGGCGGCAAGGCGGGGAAGCCGTCCGCTGCTCCGCTGGATACGCCCAGGAACGCCGCCGGCGCCGGCGCCAGCGCCGGGCGCGCGGAGGTGCGGAATTTGGCGGCGGCGTGCGGGCTGCAGGAGGACGACCGGGTGCCGCTCTCCGAGGTGGTGCTGGACTGCACGAGGCGGTGGTTCCAGGACACGCTCAAGGAGGCCCGCGCCGGCGACGCCGCCATGCAGGTGCTCGTCGGCCAGATGTACCGCAGCGGCTACGGCGTCAACAAGAACGAGCACAAGGCTCAAATTTGG-ACGGAGAAAGCATCACGATATCGATCTACAGTCTGGAAAGTTAGCAACAAACACCCAGGATACAATGCTAGTGACTCAGATTCAGATGATTCCAAGGAAACAGGCAAACAATCACATGTTACTGGAAAGTGACTACAAAACCAGCAAGGCAAGAAAAAATACCCCATGATGACATGATGTACCCCATGATGCATGAAATACGCGGTTCTATCAAGGAGATTATTTGCGTGCCCTATTAGTTAAGCGTGTATGGTGCTCTGTTCTCGTTTGTGTGGTTTACAAATTTACTTATCATTGAAAATGTAAAATTCTCAGGATGGGTTTCACTGAACACTGAGCATACGAGGAATCAGTAAGGATATTCGATTTTTTGTTTTGTCAAAAAAAAAA]

[+] EMBL BE041109             [AATCCGCCTCCACTCCCCCTCCCTTCCCGAGGAAACCCCCACCTTGCATGGCCAAGCGCCTCCCGGCCGACGGCCTCGCCGCCATCCGCGCCGCGCTCCGCCCCTCCGCCCGCGGCCTCCGATCCCGCTCCTCCCAAGGCGGCAAGGCGGGGAAGCCGTCCGCTGCTCCGCTGGATACGCCCAGGAACGCCGCCGGCGCCGGCGCCAGCGCCGGGCGCGCGGAGGTGCGGAATTTGGCGGCGGCGTGCGGGCTGCAGGAGGACGACCGGGTGCCGCTCTCCGAGGTGGTGCTGGACTGCACGAGGCGGTGGTTCCAGGACACGCTCAAGGAGGCCCGCGCCGGCGACGCCGCCATGCAGGTGCTCGTCGGCCAGATGTACCGTAGCGGCTACGGCGTCAACAAGAACGAGCACAAGGCTCAAATTTGG ACGGAGAAAGCATCACGATATCGATCTACAGTCTGGAAAGTTAGCAACATACACCCAGGATACAATGCTAGTGACTCAGATTCAGATGATTCCAAGGAAACAGGCAAACAATCACATGTTACTGGAAAGTGACCACAAAACCAGCAAGGCAAGAAAAAATACCCCATGATGACATGATGTACCCCATGATGCATGAAATACGCGGCTCTATCAAGGAGATTATct                                                                                                                                                                     ]
[+] EMBL AK066846             [           ACTCCCCCTCCCTTCCCGAGGAAACCCCCACCTTGCATGGCCAAGCGCCTCCCGGCCGACGGCCTCGCCGCCATCCGCGCCGCGCTCCGCCCCTCCGCCCGCGGCCTCCGATCCCGCCCCTCCCAAGGCGGCAAGGCGGGGAAGCCGTCCGCCGCTCCGCTGGATACGCCCAGGAACGCCGCCGGCGCCGGCGCCAGCGCCGGGCGCGCGGAGGTGCGGGATTTGGCGGCGGCGTGCGGACTGCAGGAGGACGACCGGGTGCCGCTCTCCGAGGTGGTGCTGGACTGCACGAGGCGGTGGTTCCAGGACACGCTCAAGGAGGCCCGCGCCGGCGACGCCGCCATGCAGGTGCTCGTCGGCCAGATGTACCGCAGCGGCTACGGCGTCAACAAGAACGAGCACAAGGCTCAAATTTGG ACGGAGAAAGCATCACGATATCGATCTACAGTCTGGAAAGTTAGCAACAAACGCCCAGGATACAATGCTAGTGACTCAGATTCAGATGATTCCAAGGAAACAGGCAAACAATCACATGTTACTGGAAAGTGACTACAAAACCAGCAAGGCAAGAAAAACTACCCCATGATGACATGATGTACCCCATGATGCATGAAATACGCGGTTCTATCAAGGAGATTATTTGCGTGCCCTATTAGTTAAGCGTGTATGGTGCTCTGTTCTCGTTTGTGTGGTTTACAAATTTACTTATCATTGAAAATGTAAAATTCTCAGGATGGGTTTCACTGAACACTGAGCATACGAGGAATCAGTAAGGATATTCGATTTTT                   ]
[+] EMBL BE040747             [                        tgCCGAGGAAACCCCCACCTTGCATGGCCAAGCGCCTCCCGGCCGACGGCCTCGCCGCCATCCGCGCCGCGCTCCGCCCCTCCGCCCGCGGCCTCCGATCCCGCTCCTCCCAAGGCGGCAAGGCGGGGAAGCCGTCCGCTGCTCCGCTGGATACGCCCAGGAACGCCGCCGGCGCCGGCGCCAGCGCCGGGCGCGCGGAGGTGCGGAATTTGGCGGCGGCGTGCGGGCTGCAGGAGGACGACCGGGTGCCGCTCTCCGAGGTGGTGCTGGACTGCACGAGGCGGTGGTTCCAGGACACGCTCAAGGAGGCCCGCGCCGGCGACGCCGGCATGCAGGTGCTCGTCGGCCAGATGTACCGCAGCGGCTACGGCGTCAACAAGAACGAGCACAAGGCTCAAATTTGGAACGGAGAAAGCATCACGATATCGATCTACAGTCTGGAAAGTTAGCAACANACACCCACGATACAATGCTAGTGACTCAAATT AGATGATTCCAAGGAAACAGGGAAACCATCACATGTTACTGGAAAAGGACTACAAAACCAGCAGGGC                                                                                                                                                                                                                                                ]
[+] EMBL BI802650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGGAAACAGGCAAACAATCACATGTTACTGGAAAGTGACTAC AAACCAGCAAGGCAAGAAAAATTACCCCATGATGACATGATGTACCCCATGATGCATGAAATACGCGGTTCTATCAAGGAGATTATTTGCGTGCCCTATTAGTTAAGCGTGTATGGTGCTCTGTTCTCGTTTGTGTGGTTTACAAATTTACTTATCATTGAAAATGTAAAATTCTCAGGATGGGTTTCACTGAACACTGAGCATACGAGGAATCAGTAAGGATATTCGATTTTTTGTTTTGTCAAAAAAAAAA]




>consensus_6495#0
AATCCGCCTCCACTCCCCCTCCCTTCCCGAGGAAACCCCCACCTTGCATGGCCAAGCGCC
TCCCGGCCGACGGCCTCGCCGCCATCCGCGCCGCGCTCCGCCCCTCCGCCCGCGGCCTCC
GATCCCGCTCCTCCCAAGGCGGCAAGGCGGGGAAGCCGTCCGCTGCTCCGCTGGATACGC
CCAGGAACGCCGCCGGCGCCGGCGCCAGCGCCGGGCGCGCGGAGGTGCGGAATTTGGCGG
CGGCGTGCGGGCTGCAGGAGGACGACCGGGTGCCGCTCTCCGAGGTGGTGCTGGACTGCA
CGAGGCGGTGGTTCCAGGACACGCTCAAGGAGGCCCGCGCCGGCGACGCCGCCATGCAGG
TGCTCGTCGGCCAGATGTACCGCAGCGGCTACGGCGTCAACAAGAACGAGCACAAGGCTC
AAATTTGGACGGAGAAAGCATCACGATATCGATCTACAGTCTGGAAAGTTAGCAACAAAC
ACCCAGGATACAATGCTAGTGACTCAGATTCAGATGATTCCAAGGAAACAGGCAAACAAT
CACATGTTACTGGAAAGTGACTACAAAACCAGCAAGGCAAGAAAAAATACCCCATGATGA
CATGATGTACCCCATGATGCATGAAATACGCGGTTCTATCAAGGAGATTATTTGCGTGCC
CTATTAGTTAAGCGTGTATGGTGCTCTGTTCTCGTTTGTGTGGTTTACAAATTTACTTAT
CATTGAAAATGTAAAATTCTCAGGATGGGTTTCACTGAACACTGAGCATACGAGGAATCA
GTAAGGATATTCGATTTTTTGTTTTGTCAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)