cluster # 6496

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Oryza sativa
cluster # 6496 cluster # 6496 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6496#0 length = 1908 sequences # 4
consensusID : consensus_6496#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1908
fasta sequence
                              [TCCCTCCCCTCCCTTCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCATGCCGAGCGCCTTCCACTCCCTCCTCCTCCCCGCCATTCGCAACCCCAAACCTAGCCGTCGCCGCGGCCGCGGCCGCGGCGGCAGCAAACGCCCCAAGAAGACCACCAAATCCAAGAACCGCCTCGCCGACGCCGCCGCCGGAGACGCCACCGCCTTCCACCTGAAGACCTCCGCGCGCGCCGGTCCGGGGGGTGCCGGGAGCGGCCGGCGAGGCGATGGGGGATGCCTCGTGCAGCCGCTCGGCAACCTCCTCCTCCTCGGCGGCGGCGGCAACCTCCGCGACGCGGGGCTCGGCGCGCTCCGCCCGCTCCCCGACGACGTCCTCCTCGACGTGCTCGGCCTGCTCGCGGCGCGCGACCTCGCTAGGCTCTCCGCGGCGTCGAGGGCGCTCTACGTCGTCGCCTCCCACGACCCGCTCTGGCGGGCGCTCGTCCTCGACGAGCTCGGCGGGGACTTCGCCTTCTCGGGCTCGTGGCGCGCCACCTACATCGCCGCCGCGTCGGGCGGCCGCGCCCACCTCCCCCCGCGGGGCCTAGAGATCAGGGGGTTCTACTCCGACTACCTCTTCCAGAGCTGGCTCTGCGCCAACATGGAGATGCGGCCGGAGTGGCTCCACCGGGACACCATCGATCGCCGCCGCGGCATGTCCGTCGAGCAATTCGTCTCCGAATTCGAGGAGCCCAATAGGCCGGTGCTTCTGGAAGGCTGCCTCGAGAGCTGGCCAGCATTGCAGAAGTGGACCAGGGAGCACTTGCTGAAGGTCTCGGCCGGGAAGGAGTTCGCCGTCGGGCCGGTGAGCATGACGCTGGATAGGTACCTCCAGTATGCCGGCAATGTGCAGGAGGAGAGGCCATTGTACCTGTTCGATGCCAAGTTCACCGAGAAGGTGCCGGAGATGGGGAGGGACTATGAGGTGCCGGCGTACTTCCGAGAGGACCTATTCGGGGTGCTTGGGGAGGAAAGGCCGGACCACCGATGGGTTATCATTGGGCCGGCAGGTTCAGGGTCGTCGTTTCATGTTGATCCAAACTCGACATCGGCGTGGAATGCTGTGATCAAGGGAGCCAAGAAGTGGGTGATGTTCCCACCGGAGGTGGTGCCGCCAGGAGTTCATCCAAGTGCGGATGGAGCAGAAGTCACTAGCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAAAAAAAAAAAAAAAAAAAACCGGG]

[+] EMBL AK068220             [TCCCTCCCCTCCCTTCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCATGCCGAGCGCCTTCCACTCCCTCCTCCTCCCCGCCATTCGCAACCCCAAACCTAGCCGTCGCCGCGGCCGCGGCCGCGGCGGCAGCAAACGCCCCAAGAAGACCACCAAATCCAAGAACCGCCTCGCCGACGCCGCCGCCGGAGACGCCACCGCCTTCCACCTGAAGACCTCCGCGCGCGCCGGTCCGGGGGGTGCCGGGAGCGGCCGGCGAGGCGATGGGGGATGCCTCGTGCAGCCGCTCGGCAACCTCCTCCTCCTCGGCGGCGGCGGCAACCTCCGCGACGCGGGGCTCGGCGCGCTCCGCCCGCTCCCCGACGACGTCCTCCTCGACGTGCTCGGCCTGCTCGCGGCGCGCGACCTCGCTAGGCTCTCCGCGGCGTCGAGGGCGCTCTACGTCGTCGCCTCCCACGACCCGCTCTGGCGGGCGCTCGTCCTCGACGAGCTCGGCGGGGACTTCGCCTTCTCGGGCTCGTGGCGCGCCACCTACATCGCCGCCGCGTCGGGCGGCCGCGCCCACCTCCCCCCGCGGGGCCTAGAGATCAGGGGGTTCTACTCCGACTACCTCTTCCAGAGCTGGCTCTGCGCCAACATGGAGATGCGGCCGGAGTGGCTCCACCGGGACACCATCGATCGCCGCCGCGGCATGTCCGTCGAGCAATTCGTCTCCGAATTCGAGGAGCCCAATAGGCCGGTGCTTCTGGAAGGCTGCCTCGAGAGCTGGCCAGCATTGCAGAAGTGGACCAGGGAGCACTTGCTGAAGGTCTCGGCCGGGAAGGAGTTCGCCGTCGGGCCGGTGAGCATGACGCTGGATAGGTACCTCCAGTATGCCGGCAATGTGCAGGAGGAGAGGCCATTGTACCTGTTCGATGCCAAGTTCACCGAGAAGGTGCCGGAGATGGGGAGGGACTATGAGGTGCCGGCGTACTTCCGAGAGGACCTATTCGGGGTGCTTGGGGAGGAAAGGCCGGACCACCGATGGGTTATCATTGGGCCGGCAGGTTCAGGGTCGTCGTTTCATGTTGATCCAAACTCGACATCGGCGTGGAATGCTGTGATCAAGGGAGCCAAGAAGTGGGTGATGTTCCCACCGGAGGTGGTGCCGCCAGGAGTTCATCCAAGTGCGGATGGAGCAGAAGTCACTAGCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGCCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATT                                      ]
[-] EMBL CA762350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCCTGTATCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCTGTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTGGTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTGTTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACAGACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATGATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTGGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACCCAATAATAAATTGATCATTGACCTTGTGCAAAAAAAAAAAAAAAAAAAAAAACCGGG]
[+] EMBL CF331352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gagtAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTTTGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAA                       ]
[-] EMBL CF331351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCGTTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGTTTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACGATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTATGAGCCTTTGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGTAGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAAATTGATCATTGACCTTGTGCAAAAAA                      ]




>consensus_6496#0
TCCCTCCCCTCCCTTCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGAGCATGCCGAGCGCC
TTCCACTCCCTCCTCCTCCCCGCCATTCGCAACCCCAAACCTAGCCGTCGCCGCGGCCGC
GGCCGCGGCGGCAGCAAACGCCCCAAGAAGACCACCAAATCCAAGAACCGCCTCGCCGAC
GCCGCCGCCGGAGACGCCACCGCCTTCCACCTGAAGACCTCCGCGCGCGCCGGTCCGGGG
GGTGCCGGGAGCGGCCGGCGAGGCGATGGGGGATGCCTCGTGCAGCCGCTCGGCAACCTC
CTCCTCCTCGGCGGCGGCGGCAACCTCCGCGACGCGGGGCTCGGCGCGCTCCGCCCGCTC
CCCGACGACGTCCTCCTCGACGTGCTCGGCCTGCTCGCGGCGCGCGACCTCGCTAGGCTC
TCCGCGGCGTCGAGGGCGCTCTACGTCGTCGCCTCCCACGACCCGCTCTGGCGGGCGCTC
GTCCTCGACGAGCTCGGCGGGGACTTCGCCTTCTCGGGCTCGTGGCGCGCCACCTACATC
GCCGCCGCGTCGGGCGGCCGCGCCCACCTCCCCCCGCGGGGCCTAGAGATCAGGGGGTTC
TACTCCGACTACCTCTTCCAGAGCTGGCTCTGCGCCAACATGGAGATGCGGCCGGAGTGG
CTCCACCGGGACACCATCGATCGCCGCCGCGGCATGTCCGTCGAGCAATTCGTCTCCGAA
TTCGAGGAGCCCAATAGGCCGGTGCTTCTGGAAGGCTGCCTCGAGAGCTGGCCAGCATTG
CAGAAGTGGACCAGGGAGCACTTGCTGAAGGTCTCGGCCGGGAAGGAGTTCGCCGTCGGG
CCGGTGAGCATGACGCTGGATAGGTACCTCCAGTATGCCGGCAATGTGCAGGAGGAGAGG
CCATTGTACCTGTTCGATGCCAAGTTCACCGAGAAGGTGCCGGAGATGGGGAGGGACTAT
GAGGTGCCGGCGTACTTCCGAGAGGACCTATTCGGGGTGCTTGGGGAGGAAAGGCCGGAC
CACCGATGGGTTATCATTGGGCCGGCAGGTTCAGGGTCGTCGTTTCATGTTGATCCAAAC
TCGACATCGGCGTGGAATGCTGTGATCAAGGGAGCCAAGAAGTGGGTGATGTTCCCACCG
GAGGTGGTGCCGCCAGGAGTTCATCCAAGTGCGGATGGAGCAGAAGTCACTAGCCCTGTA
TCTATCATGGAATGGTTCATGAATTTTTATGGGGCATGTAAGACCTGGGAAAAGAGGCCT
GTTGAGTGTATATGCCGGGCTGGAGAGGTGGTTTTTGTGCCTAATGGATGGTGGCATTTG
GTTATCAATCTGGAGGAATCTATTGCGATTACTCAGAATTATGTGAGCAGGAGGAATCTG
TTGAATGTTCTTGACTTTCTCAAGAGGCCCAATGCAAGTGAACTTGTATCAGGGACTACA
GACAGGGTAAACCTGCATGACAAGTTCCGCAATGCCATCGATATGACTTATCCTGGGATG
ATTAAACAGCTTGAACTTGAAGCTCAGCAGAAGGCTGCTGCTCGCAAGAAGAAAGTCTCG
TTCTGGGAATCTGCGGTAGATGCCAATACTGGAGGATTCAAGTTCTCATTCTGATTTCGT
TTCTAGCAGCTAGGTCTGTCAGTCTGATACTTGATTGCTGTTCTTGGTGAAAGTTCGACG
ATTTTGCCATTCCATTTAAATGCTCAATCACATCTGATTTCCTACCTGAATTCAGGTTTA
TGAGCCTATGCATTGTCTGAATCTGTCTTAACTGTATCATCTTAAATTTTGGAGGAATGT
AGTCCCAGACATGTATTTCATTGTTGTTGTTGTTGTAACATGTAGCTTACACAATAATAA
ATTGATCATTGACCTTGTGCAAAAAAAAAAAAAAAAAAAAAAACCGGG
clustalw multiple alignements is not computed in this case