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Oryza sativa
cluster # 6500 cluster # 6500       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6500#0 length = 760 sequences # 4  

consensusID : consensus_6500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 760
fasta sequence
                              [GCAGCAGGAGCGACCTGGAGGCTGGAGGATAGATGGCCAGGACGACGCTCTACAGGCCAAGGGTGAAGAGCTTCTGGGTGCTCGTGCGCCGCCTTCTCTGCTGCCGCCGCAAGAGTTACAGGCCGGATTATGCGGCTGCCGGGGAGGAGGACGACGGCGAGAAGAGCAGCCTCCTCTTGACCAGCAGAAGCTCTTTGGAGGAGCTCCTGGTGTCGGACGACGCCGACGACGACGGCGCCATCGACGACGCCGCCGTGACCTGCCGGAACGCGTCGCTGTGCGCCAAGAAAGATGGTCAGGCGCCGGTGGTCGTGCTACCACCACCGGGGCTGCATCACCCAGTGATGGCTCGGCCGGCGCACGGCATGGTGACGACGTCGTCGGGCGGCGGCCGTGATGGTGCGGCCGTGCAGTGCCGGCGGCGGTTCATGTTCGGCGGGCTCCGGCGGCGGCTGATGATGAGGAGACCGTGGCGGCCGGTGCTCGTCGCCATCCCGGAGTGAGCATGGACAAACCAGAAATGACATTCCGGTAAAATCCGTTGGAATTGAATCAATCGATTGCAGTATGCATATACTCTAGTGTAGCTTTGCGTGTTGCTCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCTTCTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAACAGCATACTTGAACATGTCCAGTGTCTTTGCTGTGAAGCAAAATTGCAACCCTGCTACT]

[+] EMBL CB655886             [GCAGCAGGAGCGACCTGGAGGCTGGAGGATAGATGGCCAGGACGACGCTCTACAGGCCAAGGGTGAAGAGCTTCTGGGTGCTCGTGCGCCGCCTTCTCTGCTGCCGCCGCAAGAGTTACAGGCCGGATTATGCGGCTGCCGGGGAGGAGGACGACGGCGAGAAGAGCAGCCTCCTCTTGACCAGCAGAAGCTCTTTGGAGGAGCTCCTGGTGTCGGACGACGCCGACGACGACGGCGCCATCGACGACGCCGCCGTGACCTGCCGGAACGCGTCGCTGTGCGCCAAGAAAGATGGTCAGGCGCCGGTGGTCGTGCTACCACCACCGGGGCTGCATCACCCAGTGATGGCTCGGCCGGCGCACGGCATGGTGACGACGTCGTCGGGCGGCGGCCGTGATGGTGCGGCCGTGCAGTGCCGGCGGCGGTTCATGTTCGGCGGGCTCCGGCGGCGGCTGATGATGAGGAGACCGTGGCGGCCGGTGCTCGTCGCCATCCCGGAGTGAGCATGGACAAACCAGAAATGACATTCCGGTAAAATCCGTTGGAATTGAATCAATCGATTGCAGTATGCATATACTCTAGTGTAGCTTTGCGTGTTGCTCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCTTCTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAACAGCATACTTGAACATGTCCAGTGTCTTTGCTGTGAAGCAAAATTGCAACCCTGCTAC ]
[+] EMBL AK062428             [           GACCTGGAGGCTGGAGGATAGATGGCCAGGACGACGCTCTACAGGCCAAGGGTGAAGAGCTTCTGGGTGCTCGTGCGCCGCCTTCTCTGCTGCCGCCGCAAGAGTTACAGGCCGGATTATGCGGCTGCCGGGGAGGAGGACGACGGCGAGAAGAGCAGCCTCCTCTTGACCAGCAGAAGCTCTTTGGAGGAGCTCCTGGTGTCGGACGACGCCGACGACGACGGCGCCATCGACGACGCCGCCGTGACCTGCCGGAACGCGTCGCTGTGCGCCAAGAAAGATGGTCAGGCGCCGGTGGTCGTGCTACCACCACCGGGGCTGCATCACCCAGTGATGGCTCGGCCGGCGCACGGCATGGTGACGACGTCGTCGGGCGGCGGCCGTGATGGTGCGGCCGTGCAGTGCCGGCGGCGGTTCATGTTCGGCGGGCTCCGGCGGCGGCTGATGATGAGGAGACCGTGGCGGCCGGTGCTCGTCGCCATCCCGGAGTGAGCATGGACAAACCAGAAATGACATTCCGGTAAAATCCGTTGGAATTGAATCAATCGATTGCAGTATGCATATACTCTAGTGTAGCTTTGCGTGTTGCTCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCTTCTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAACAGCATACTTGAACATGTCCAGTGT                                  ]
[-] EMBL CB655887             [                                                                                                                       AGGCCGGATTATGCGGCTGCCGGGGAGGAGGACGACGGCGAGAAGAGCAGCCTCCTCTTGACCAGCAGAAGCTCTTTGGAGGAGCTCCTGGTGTCGGACGACGCCGACGACGACGGCGCCATCGACGACGCCGCCGTGACCTGCCGGAACGCGTCGCTGTGCGCCAAGAAAGATGGTCAGGCGCCGGTGGTCGTGTTACCACCCCCGGGGCTGCATCACCCAGTGATGGTTCGGCCGGCGCACGGCATGGTGACGACGTCGTCGGGCGGCGGCCGTGATGGTGCGGCCGTGCAGTGCCGGCGGCGGTTCATGTTCGGCGGGCTCCGGCGGCGGCTGATGATGAGGAGACCGTGGCGGCCGGTGCTCGTCGCCATCCCGGAGTGAGCATGGACAAACCAGAAATGACATTCCGGTAAAATCCGTTGGAATTGAATCAATCGATTGCAGTATGCATATACTTTAGTGTAGCTTTGCGTGTTGCTCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCTTTTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAACAGCATACTTGAACATGTCCAGTGTCTTTGCTGTGAAGCAAAATTGCACCCCTGCTACT]
[+] EMBL CA766957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGATTGCAGTATGCATATATTCTAGTGTAGCTTTGCGTGTTGCTCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCTTCTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAAC                                                          ]


>consensus_6500#0 GCAGCAGGAGCGACCTGGAGGCTGGAGGATAGATGGCCAGGACGACGCTCTACAGGCCAA GGGTGAAGAGCTTCTGGGTGCTCGTGCGCCGCCTTCTCTGCTGCCGCCGCAAGAGTTACA GGCCGGATTATGCGGCTGCCGGGGAGGAGGACGACGGCGAGAAGAGCAGCCTCCTCTTGA CCAGCAGAAGCTCTTTGGAGGAGCTCCTGGTGTCGGACGACGCCGACGACGACGGCGCCA TCGACGACGCCGCCGTGACCTGCCGGAACGCGTCGCTGTGCGCCAAGAAAGATGGTCAGG CGCCGGTGGTCGTGCTACCACCACCGGGGCTGCATCACCCAGTGATGGCTCGGCCGGCGC ACGGCATGGTGACGACGTCGTCGGGCGGCGGCCGTGATGGTGCGGCCGTGCAGTGCCGGC GGCGGTTCATGTTCGGCGGGCTCCGGCGGCGGCTGATGATGAGGAGACCGTGGCGGCCGG TGCTCGTCGCCATCCCGGAGTGAGCATGGACAAACCAGAAATGACATTCCGGTAAAATCC GTTGGAATTGAATCAATCGATTGCAGTATGCATATACTCTAGTGTAGCTTTGCGTGTTGC TCGGTTTCTTTCTTTGTTCGTTGCTTGCTGCAGTATGTGACTATACTAGCTATTGATGCT TCTATCACTGTTCTGTAATCATCAACGATGTCGGTGCATAACAGCATACTTGAACATGTC CAGTGTCTTTGCTGTGAAGCAAAATTGCAACCCTGCTACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)