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Oryza sativa
cluster # 6507 cluster # 6507       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6507#0 length = 1633 sequences # 4  

consensusID : consensus_6507#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1633
fasta sequence
                              [CTGCTCCTCTTCTCATCGCCACGCTACCTCTCAATGGAGGCCTTCCTCGCCGGCTTCCGGGCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCCGCCGCCCGGAGCCTCCCTCCCAACACCTCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGGCTTCTTTCCTCATCGGTGGTCTGCATGGCGGAGCCCTATCTCATAGCAAAGTTGGATTCTGCAGAGAAGGCTTGGAAGGAAATGTCGGTTAGATTGGCTGATCCTGATATAGTTTCGGATCCCAGCGAGTACCAAAAACTTGCACAATCAGTTGCTGAACTAGATCAGGTTGTGAGTACGTACAGGCAGTTTAAGGACTGTGAGAAGCAAATTGAAGAAACAAAAGTTTTGCAAAAAGAGAATGAAGATGACCCAGATATGGCAGAGATGATTGATTCAGAGATGGAGTCTCTATCTAACCAGCTTGAAGAGCTTGAGGAAAAACTGAAGTTACTACTGCTTCCCAATGATCCTCTTGATGCACGCAACATCTTACTTGAAGTAAGAGCAGGTGCTGGTGGTGATGAAGCTGGAATTTGGGCTGGTGACCTTGTGCGTATGTATCAAAAATACTGTGAGCGCAACTCCTGGAAGTTCAAACCAGTTTCCAGCTCAGAAGCAGAAAAGGGTGGGTTCAAGACATATGTGATGGAGGTGAAGGGCAAACAAGTCTACAGTAAACTGAAGTTTGAGTCAGGTGTACACCGTGTTCAGCGCGTTCCTCAGACAGAGACTATGGGCCGTGTTCACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATGTGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGCAGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCTACGGGAATTCGGATATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGAGAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGAAACTGCAGGTTGGAACTGGTGCTCGTTCTGAGAAGATAAGGACGTACAATTATAAGGACAACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCTCATGAGCATGACTAATGTCAGAAAACACACTGATGCA-TTTTCAGTTCCTCTTACAGTTACAAATTTTGAG-TAGTTGGATATATGCAATGTGTACATCTCAACAGTT-GCATAGCTACAATATGCATTATGCACAATTCAACCT-GTTAATAGATGGGAATGAATTATGGTGATTTGTCAATGTGTTCAATTGAAA]

[+] EMBL AK066354             [CTGCTCCTCTTCTCATCGCCACGCTACCTCTCAATGGAGGCCTTCCTCGCCGGCTTCCGGGCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCCGCCGCCCGGAGCCTCCCTCCCAACACCTCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGGCTTCTTTCCTCATCGGTGGTCTGCATGGCGGAGCCCTATCTCATAGCAAAGTTGGATTCTGCAGAGAAGGCTTGGAAGGAAATGTCGGTTAGATTGGCTGATCCTGATATAGTTTCGGATCCCAGCGAGTACCAAAAACTTGCACAATCAGTTGCTGAACTAGATCAGGTTGTGAGTACGTACAGGCAGTTTAAGGACTGTGAGAAGCAAATTGAAGAAACAAAAGTTTTGCAAAAAGAGAATGAAGATGACCCAGATATGGCAGAGATGATTGATTCAGAGATGGAGTCTCTATCTAACCAGCTTGAAGAGCTTGAGGAAAAACTGAAGTTACTACTGCTTCCCAATGATCCTCTTGATGCACGCAACATCTTACTTGAAGTAAGAGCAGGTGCTGGTGGTGATGAAGCTGGAATTTGGGCTGGTGACCTTGTGCGTATGTATCAAAAATACTGTGAGCGCAACTCCTGGAAGTTCAAACCAGTTTCCAGCTCAGAAGCAGAAAAGGGTGGGTTCAAGACATATGTGATGGAGGTGAAGGGCAAACAAGTCTACAGTAAACTGAAGTTTGAGTCAGGTGTACACCGTGTTCAGCGCGTTCCTCAGACAGAGACTATGGGCCGTGTTCACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATGTGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGCAGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCTACGGGAATTCGGATATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGAGAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGAAACTGCAGGTTGGAACTGGTGCTCGTTCTGAGAAGATAAGGACGTACAATTATAAGGACAACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCTCATGAGCATGACTAATGTCAGAAAACACACTGATGCA TTTTCAGTTCCTCTTACAGTTACAAATTTTGAG TAGTTGGATATATGCAATGTGTACATCTCAACAGTT GCATAGCTACAATATGCATTATGCACAATTCAACCT GTTAATA                                            ]
[+] EMBL AK061105             [     CCTCTTCTCATCGCCACGCTACCTCTCAATGGAGGCCTTCCTCGCCGGCTTCCGGGCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCCGCCGCCCGGAGCCTCCCTCCCAACACCTCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGGCTTCTTTCCTCATCGGTGGTCTGCATGGCGGAGCCCTATCTCATAGCAAAGTTGGATTCTGCAGAGAAGGCTTGGAAGGAAATGTCGGTTAGATTGGCTGATCCTGATATAGTTTCGGATCCCAGCGAGTACCAAAAACTTGCACAATCAGTTGCTGAACTAGATCAGGTTGTGAGTACGTACAGGCAGTTTAAGGACTGTGAGAAGCAAATTGAAGAAACAAAAGTTTTGCAAAAAGAGAATGAAGATGACCCAGATATGGCAGAGATGATTGATTCAGAGATGGAGTCTCTATCTAACCAGCTTGAAGAGCTTGAGGAAAAACTGAAGTTACTACTGCTTCCCAATGATCCTCTTGATGCACGCAACATCTTACTTGAAGTAAGAGCAGGTGCTGGTGGTGATGAAGCTGGAATTTGGGCTGGTGACCTTGTGCGTATGTATCAAAAATACTGTGAGCGCAACTCCTGGAAGTTCAAACCAGTTTCCAGCTCAGAAGCAGAAAAGGGTGGGTTCAAGACATATGTGATGGAGGTGAAGGGCAAACAAGTCTACAGTAAACTGAAGTTTGAGTCAGGTGTACACCGTGTTCAGCGCGTTCCTCAGACAGAGACTATGGGCCGTGTTCACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATGTGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGCAGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCTACGGGAATTCGGATATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGAGAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGAAACTGCAGGTTGGAACTGGTGCTCGTTCTGAGAAGATAAGGACGTACAATTATAAGGACAACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCTCATGAGCATGACTAATGTCAGAAAACACACTGATGCA TTTTCAGTTCCTCTTACAGTTACAAATTTTGAG TAGTTGGATATATGCAATGTGTACATCTCAACAGTT GCATAGCTACAATATGCATTATGCACAATTCAACCT GTTAATAGATGGGAATGAATTATGGTGATTTGTCAATGTGTTCAATTGAAA]
[+] EMBL CA766993             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATGTGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGCAGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCCACGGGAATTCGGATATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGAGAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGAAACTGCAGGTTGGAACTGGTGCTCGTTCTGAAAAGATAAGGACGTACAATTATAAGGACAACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGGACCCACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCTCATGAGCATGACTAATGTCAGAAAACACATTGATGCATTTTTCAGTTNCTCTTACAGTTACNAATTTTGAG TAGTTGGATATATGCAATGNGTACATCTCAACAGNT GCATAGCTACAATATGCATTATGCACAATTCAANCT GGTNATAGATGGGAATGAA                                ]
[+] EMBL OS0082A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCA CGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCTCATGAGCATGACTAATGTCAGAAAACACACTGATGCA TTTTCAGTTCCTCTTACAGTTACAAATTTTGAGTTAGTTGGATATATGCAATGTGTACATCTCAACAGTTGGCATAGCTACAATATGCATTATGCACAATTCAACCTGGTTAATAGATGGGAATGAATTATGGTGATTTGTC                 ]


>consensus_6507#0 CTGCTCCTCTTCTCATCGCCACGCTACCTCTCAATGGAGGCCTTCCTCGCCGGCTTCCGG GCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCCGCCGCCCGGAGCCTCCCTCCCAACACC TCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGGCTTCTTTCCTCATCGGTGGTCTGCATG GCGGAGCCCTATCTCATAGCAAAGTTGGATTCTGCAGAGAAGGCTTGGAAGGAAATGTCG GTTAGATTGGCTGATCCTGATATAGTTTCGGATCCCAGCGAGTACCAAAAACTTGCACAA TCAGTTGCTGAACTAGATCAGGTTGTGAGTACGTACAGGCAGTTTAAGGACTGTGAGAAG CAAATTGAAGAAACAAAAGTTTTGCAAAAAGAGAATGAAGATGACCCAGATATGGCAGAG ATGATTGATTCAGAGATGGAGTCTCTATCTAACCAGCTTGAAGAGCTTGAGGAAAAACTG AAGTTACTACTGCTTCCCAATGATCCTCTTGATGCACGCAACATCTTACTTGAAGTAAGA GCAGGTGCTGGTGGTGATGAAGCTGGAATTTGGGCTGGTGACCTTGTGCGTATGTATCAA AAATACTGTGAGCGCAACTCCTGGAAGTTCAAACCAGTTTCCAGCTCAGAAGCAGAAAAG GGTGGGTTCAAGACATATGTGATGGAGGTGAAGGGCAAACAAGTCTACAGTAAACTGAAG TTTGAGTCAGGTGTACACCGTGTTCAGCGCGTTCCTCAGACAGAGACTATGGGCCGTGTT CACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATGTGGTTATC GATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGCAGAATGTT AACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCTACGGGAATTCGGATATTCTGT ACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGAGAGCAAAG CTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGAAACTGCAG GTTGGAACTGGTGCTCGTTCTGAGAAGATAAGGACGTACAATTATAAGGACAACAGAGTG ACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAGATATCGAG TCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGATGGCCACA TCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCTCCTTCCAC CTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAACGGGTGGTG ATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTTCCGTTGCT CATGAGCATGACTAATGTCAGAAAACACACTGATGCATTTTCAGTTCCTCTTACAGTTAC AAATTTTGAGTAGTTGGATATATGCAATGTGTACATCTCAACAGTTGCATAGCTACAATA TGCATTATGCACAATTCAACCTGTTAATAGATGGGAATGAATTATGGTGATTTGTCAATG TGTTCAATTGAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)