cluster # 6516

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Oryza sativa
cluster # 6516 cluster # 6516 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6516#0 length = 1841 sequences # 4
consensusID : consensus_6516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1841
fasta sequence
                              [CCACTCCACCTCGAAACCCACAAAAATGGCGTCGCCCACCCACGCCGCCTACCTCGCCCCCACCGCCCCTCCCCGCCATCTCCACCTCCTCCTCCGCCTCCGCCTCCGCGGCCGCCCCGCCGTCTCAACCTGCGTCCGCGCCACCGCCCGCGGGGGGGATGGCGGGTCGTCGTACCTGGACATGTGGAAGAAGGCCGTGGAGAGGGAGCGCCGCCGCAGGAGCGGGAACAGCAGCAGAAGCCGGCGGCGACCGCGATCCAGGCCGGATCAGAGAGTGGCCTGGTTTCCCGTACGGCTCCGGGGGAGTCGGATCGGGCATCCCCGCCGCCGCCGGTGACGGAGACGGCGACCGAGGCGGCGAAAGTTTCAGTGCCGGACTCTGGTGATTCATCTCCTTTCAAGAAGTCAAGTTCCAAGCTCGGTACTCCAGGCCCGGACTTCTGGTCGTGGTTACCACCTGTGGAAAATAGCACTAAACTAGGAGAAATCGACACTGGGTTAAAACAATCTGAGAAATTAGACTCCTTCGCCGGTCAGCCTGATCTGCTGATGGAAAAGGAACAGTCAGAAGACATTTTATCGCTCCCGTTCGAAACCTCTTTCTTCAAGAAGGAAGACCGATCTCTTCCTCCCTTCCAGTCGTTTGCTGAGCCTGAAAATGTGGAATCCGAGCCCAGTATTACTGCTGATGCAGAGGAGACATTCGAAGATCAGTTTTCGAAAAACGCAGCTGAGGCAGCTAGAGCTCTTAGTGCAAGCGACGAGAAGTCATCACATGGGGTGCGTCCAGATGGTTCATTGTGGTGGAAGGAGACAGGTGTAGAACAAAGGCCTGATGGTGTAACTTGCAAGTGGACCGTGATTAGGGGAGTTAGTGCTGATGGAGCTGTTGAATGGGAGGACAAGTATTGGGAGGCTTCAGACCGGTTTGATCACAAAGAGCTAGGTTCTGAGAAGTCTGGTCGTGATGCTACAGGGAATGTTTGGCGGGAATACTGGAAAGAGTCTATGTGGCAGGATTTCACATGTGGTGTTATGCACATGGAGAAGACGGCAGACAAGTGGGGACAGAATGGTAAAGGGGAGCAGTGGCAAGAGCAGTGGTGGGAGCATTACGATTCAAGCGGTAAAGCTGAGAAATGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCACTAGATGTTGGTCACGCTCATGTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACACTGACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGATGAGCATTTCGACCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAGTACGGGGATCGCTGGAATCGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCACAAGTATGGCAGGAGCAGCAGCGGTGAGCACTGGGACACACACGTTCCCCAGGACACCTGGTATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAACTCGGTGCAGCTCCGGTCTGTGAAGAGGCAGACTCCAAAAAACACTAAGCCTGAAAAAGATTAGATATTTAGAATAGAATCTACTCAATTGCTATCATAAAAAATAGTTGGCTACATGGCCATCTTTCATTTTTGATCTTGCTGAAGAGCCCATGCTTGTAAAATAAGATTGAATGGCTGATTTCAGTTGTCCGGTTTTATGCCAATACCTGTACCGAGCTATGTTATCAAAAGTTCATATGCTACTATGCAATAGAAAGGTTCCTTCTTTTAGTTTCGGGAACAAACAAAAAGGGG]

[+] EMBL AK072257             [CCACTCCACCTCGAAACCCACAAAAATGGCGTCGCCCACCCACGCCGCCTACCTCGCCCCCACCGCCCCTCCCCGCCATCTCCACCTCCTCCTCCGCCTCCGCCTCCGCGGCCGCCCCGCCGTCTCAACCTGCGTCCGCGCCACCGCCCGCGGGGGGGATGGCGGGTCGTCGTACCTGGACATGTGGAAGAAGGCCGTGGAGAGGGAGCGCCGCCGCAGGAGCGGGAACAGCAGCAGAAGCCGGCGGCGACCGCGATCCAGGCCGGATCAGAGAGTGGCCTGGTTTCCCGTACGGCTCCGGGGGAGTCGGATCGGGCATCCCCGCCGCCGCCGGTGACGGAGACGGCGACCGAGGCGGCGAAAGTTTCAGTGCCGGACTCTGGTGATTCATCTCCTTTCAAGAAGTCAAGTTCCAAGCTCGGTACTCCAGGCCCGGACTTCTGGTCGTGGTTACCACCTGTGGAAAATAGCACTAAACTAGGAGAAATCGACACTGGGTTAAAACAATCTGAGAAATTAGACTCCTTCGCCGGTCAGCCTGATCTGCTGATGGAAAAGGAACAGTCAGAAGACATTTTATCGCTCCCGTTCGAAACCTCTTTCTTCAAGAAGGAAGACCGATCTCTTCCTCCCTTCCAGTCGTTTGCTGAGCCTGAAAATGTGGAATCCGAGCCCAGTATTACTGCTGATGCAGAGGAGACATTCGAAGATCAGTTTTCGAAAAACGCAGCTGAGGCAGCTAGAGCTCTTAGTGCAAGCGACGAGAAGTCATCACATGGGGTGCGTCCAGATGGTTCATTGTGGTGGAAGGAGACAGGTGTAGAACAAAGGCCTGATGGTGTAACTTGCAAGTGGACCGTGATTAGGGGAGTTAGTGCTGATGGAGCTGTTGAATGGGAGGACAAGTATTGGGAGGCTTCAGACCGGTTTGATCACAAAGAGCTAGGTTCTGAGAAGTCTGGTCGTGATGCTACAGGGAATGTTTGGCGGGAATACTGGAAAGAGTCTATGTGGCAGGATTTCACATGTGGTGTTATGCACATGGAGAAGACGGCAGACAAGTGGGGACAGAATGGTAAAGGGGAGCAGTGGCAAGAGCAGTGGTGGGAGCATTACGATTCAAGCGGTAAAGCTGAGAAATGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCACTAGATGTTGGTCACGCTCATGTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACACTGACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGATGAGCATTTCGACCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAGTACGGGGATCGCTGGAATCGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCACAAGTATGGCAGGAGCAGCAGCGGTGAGCACTGGGACACACACGTTCCCCAGGACACCTGGTATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAACTCGGTGCAGCTCCGGTCTGTGAAGAGGCAGACTCCAAAAAACACTAAGCCTGAAAAAGATTAGATATTTAGAATAGAATCTACTCAATTGCTATCATAAAAAATAGTTGGCTACATGGCCATCTTTCATTTTTGATCTTGCTGAAGAGCCCATGCTTGTAAAATAAGATTGAATGGCTGATTTCAGTTGTCCGGTTTTATGCCAATACCTGTACCGAGCTATGTTATCAAAAGTTCATAT                                                        ]
[+] EMBL CB678879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGTGGCCCGTGATTAGGGGAGTTAGTGCTGATGGAGCTGTTGAATGGGAGGACAAGTATTGGGAGGCTTCAGACCGGTTTGATCACAAAGAGCTAGGTTCTGAGAAGTCTGGTCGTGATGCTACAGGGAATGTTTGGCGGGAATACTGGAAAGAGTCTATGTGGCAGGATTTCACATGTGGTGTTATGCACATGGAGAAGACGGCAGACAAGTGGGGACAGAATGGTAAAGGGGAGCAGTGGCAAGAGCAGTGGTGGGAGCATTACGATTCAAGCGGTAAAGCTGAGAAATGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCACTAGATGTTGGTCACGCTCATGTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACACTGACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGATGAGCATTTCGACCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAGTACGGGGATCGCTGGAATCGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCACAAGTATGGCAGGAGCAGCAGCGGTGAGCACTGGGACACACACGTTCCCCAGGACACCTGGTATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAACTCGGTGCAGCTCCGGTCTGTGAAGAGGCAGACTCCAAAAAACACTAAGC                                                                                                                                                                                                                                                       ]
[+] EMBL AK104054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGGGGAGCAGTGGCAAGAGCAGTGGTGGGAGCATTACGATTCAAGCGGTAAAGCTGAGAAATGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCACTAGATGTTGGTCACGCTCATGTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACACTGACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGATGAGCATTTCGACCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAGTACGGGGATCGCTGGAATCGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCACAAGTATGGCAGGAGCAGCAGCGGTGAGCACTAGGACACACACGTTCCCCAGGACACCTGGTATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAACTCGGTGCAGCTCCGGTCTGTGAAGAGGCAGACTCCAAAAAACACTAAGCCTGAAAAAGATTAGATATTTAGAATAGAATCTACTCAATTGCTATCATAAAAAATAGTTGGCTACATGGCCATCTTTCATTTTTGATCTTGCTGAAGAGCCCATGCTTGTAAAATAAGATTGAATGGCTGATTTCAGTTGTCCGGTTTTATGCCAATACCTGTACCGAGCTATGTTATCAAAAGTTCATATGCTACTATGCAATAGAAAGGTTCCTTC                             ]
[-] EMBL CB678880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAAGAGCAGTGGTGGGAGCATTTCGATTCAAGCGGTAAAGCTGAGAAATGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCGTTAGATGTTGGTCACGCTCATGTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACATTGACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGATGAGCATTTCGGCCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAGTACGGGGATCGCTGGAATTGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCACAAGTATGGCAGGAGCAGCAGCGGTGAGCCATGGGACACACACGTTCCCCAGGACACCTGGTATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAATTCGGTGCAGCTTCGGTCTGTGAAGAGGCAGACTCCAAAAATCCCTAAGCCTGAAAAAGATTAGATATTTAGAATAGAATCTACTCAATTGCTATCATAAAAAATAGTTGGCTACATGGCCATCTTTCATTTTTGATCTTGTCGAAGAGCCCATGCTTGTAAAATAAGATTGAATGGTTGATTTCATTTGTCCGGTTTTATGCCAATTCCTGTCCCGAGCTATGTTATCAAAAGTTCATATGCTTCTATGCAATAGAAAGGTTCCTTCTTTTAGTTTCGGGAACAAACAAAAAGGGG]




>consensus_6516#0
CCACTCCACCTCGAAACCCACAAAAATGGCGTCGCCCACCCACGCCGCCTACCTCGCCCC
CACCGCCCCTCCCCGCCATCTCCACCTCCTCCTCCGCCTCCGCCTCCGCGGCCGCCCCGC
CGTCTCAACCTGCGTCCGCGCCACCGCCCGCGGGGGGGATGGCGGGTCGTCGTACCTGGA
CATGTGGAAGAAGGCCGTGGAGAGGGAGCGCCGCCGCAGGAGCGGGAACAGCAGCAGAAG
CCGGCGGCGACCGCGATCCAGGCCGGATCAGAGAGTGGCCTGGTTTCCCGTACGGCTCCG
GGGGAGTCGGATCGGGCATCCCCGCCGCCGCCGGTGACGGAGACGGCGACCGAGGCGGCG
AAAGTTTCAGTGCCGGACTCTGGTGATTCATCTCCTTTCAAGAAGTCAAGTTCCAAGCTC
GGTACTCCAGGCCCGGACTTCTGGTCGTGGTTACCACCTGTGGAAAATAGCACTAAACTA
GGAGAAATCGACACTGGGTTAAAACAATCTGAGAAATTAGACTCCTTCGCCGGTCAGCCT
GATCTGCTGATGGAAAAGGAACAGTCAGAAGACATTTTATCGCTCCCGTTCGAAACCTCT
TTCTTCAAGAAGGAAGACCGATCTCTTCCTCCCTTCCAGTCGTTTGCTGAGCCTGAAAAT
GTGGAATCCGAGCCCAGTATTACTGCTGATGCAGAGGAGACATTCGAAGATCAGTTTTCG
AAAAACGCAGCTGAGGCAGCTAGAGCTCTTAGTGCAAGCGACGAGAAGTCATCACATGGG
GTGCGTCCAGATGGTTCATTGTGGTGGAAGGAGACAGGTGTAGAACAAAGGCCTGATGGT
GTAACTTGCAAGTGGACCGTGATTAGGGGAGTTAGTGCTGATGGAGCTGTTGAATGGGAG
GACAAGTATTGGGAGGCTTCAGACCGGTTTGATCACAAAGAGCTAGGTTCTGAGAAGTCT
GGTCGTGATGCTACAGGGAATGTTTGGCGGGAATACTGGAAAGAGTCTATGTGGCAGGAT
TTCACATGTGGTGTTATGCACATGGAGAAGACGGCAGACAAGTGGGGACAGAATGGTAAA
GGGGAGCAGTGGCAAGAGCAGTGGTGGGAGCATTACGATTCAAGCGGTAAAGCTGAGAAA
TGGGCTGATAAATGGTGCAGCTTGGATCCAAATACACCACTAGATGTTGGTCACGCTCAT
GTTTGGCATGAAAGGTGGGGCGAGAAGTATGATGGCTGCGGAGGTAGTGCAAAATACACT
GACAAATGGGCTGAACGATCAGAGGGTGACGGGTGGTCAAAGTGGGGCGATAAGTGGGAT
GAGCATTTCGACCCGAATGGCCATGGAGTGAAGCAAGGGGAGACCTGGTGGGCAGGCAAG
TACGGGGATCGCTGGAATCGCACCTGGGGCGAGCATCACAACTGTACTGGTTGGGTGCAC
AAGTATGGCAGGAGCAGCAGCGGTGAGCACTGGGACACACACGTTCCCCAGGACACCTGG
TATGAGCGTTTTCCGCACTTTGGCTTCGAGCACTGCTTCAACAACTCGGTGCAGCTCCGG
TCTGTGAAGAGGCAGACTCCAAAAAACACTAAGCCTGAAAAAGATTAGATATTTAGAATA
GAATCTACTCAATTGCTATCATAAAAAATAGTTGGCTACATGGCCATCTTTCATTTTTGA
TCTTGCTGAAGAGCCCATGCTTGTAAAATAAGATTGAATGGCTGATTTCAGTTGTCCGGT
TTTATGCCAATACCTGTACCGAGCTATGTTATCAAAAGTTCATATGCTACTATGCAATAG
AAAGGTTCCTTCTTTTAGTTTCGGGAACAAACAAAAAGGGG
clustalw multiple alignements is not computed in this case