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Oryza sativa
cluster # 6533 cluster # 6533       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6533#0 length = 1717 sequences # 2  
consensus_6533#1 length = 1635 sequences # 2  

consensusID : consensus_6533#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1717
fasta sequence
                              [CTGCATCGCCTCCTTTTCGTGAGCTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCGATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTCGCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGAGGCCCTCCGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAATCGGGCTATAACATGCGGACATGCATACTGTTGCACATCTCAAACTTGTGGTTTCAATCCACTTTTTTAAGGCTTCAACCACAGATAGCTTTGGGTATTTCGACCTTCAAATTTTGCCTGTGAATCTGTGATCCTCCATTGACATTAGTAGTGCTGCTGTTCGTCGCTGCAACGCCCTGTAGATGTATATTCATGTTTGCAACGCAGTTCACTCGATTGCCCCAAAAAAAAAAAAATATCCCTCTCCATCCTCTAGCTATATGATTATTGCAATCACTCAGTTGGACCTCCTTTTTTCCTATGGATTTGTAACCCATGTGTAAAATGAAGATTACCCCTTGCCCGTGTACACATTCCACCTCGATTGAATTCCGACTTCGGAAAGCAGCCAGCATAGCATGCTGCTTTCATGGGTTATGCAAAAAAAAAAAAAAAAAAAAAACACTGTCACGTCCGT]

[+] EMBL AK067873             [CTGCATCGCCTCCTTTTCGTGAGCTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCGATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTCGCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGAGGCCCTCCGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAATCGGGCTATAACATGCGGACATGCATACTGTTGCACATCTCAAACTTGTGGTTTCAATCCACTTTTTTAAGGCTTCAACCACAGATAGCTTTGGGTATTTCGACCTTCAAATTTTGCCTGTGAATCTGTGATCCTCCATTGACATTAGTAGTGCTGCTGTTCGTCGCTGCAACGCCCTGTAGATGTATATTCATGTTTGCAACGCAGTTCACTCGATTGCCCCAAAAAAAAAAAAATATCCCTCTCCATCCTCTAGCTATATGATTATTGCAATCACTCAGTTGGACCTCCTTTTTTCCTATGGATTTGTAACCCATGTGTAAAATGAAGATTACCCCTTGCCCGTGTACACATTCCACCTCGATTGAATTCCGACTTCGGAAAGCAGCCAGCATAGCATGCTGCTTTCATGGGTTATGCAAAA                                 ]
[-] EMBL CF336030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAATGGATCATTTCACAACCAGTTGCCAATTTTTGCACTTCCAAGCTAAAAGTATTAAATCGGGCTATAACATGCGGACATGCATACTGTTGCACATCTCAAACTTGTGGTTTCAATCCACTTTTTTAAGGCTTCAACCACAGATAGCTTTGGGTATTTCGACCTTCAAATTTTGCCTGTGAATCTGTGATCCTCCATTGACATTAGTAGTGCTGCTGTTCGTCGCTGCAACGCCCTGTAGATGTATATTCATGTTTGCAACGCAGTTCACTCGATTGCCCCAAAAAAAAAAAAATATCCCTTTCCATCCTCTAGCTATATGATTATTGCAATCACTCAGTTGGACCTCCTTTTTTCCTATGGATTTGTAACCCATGTGTAAAATGAAGATTACCCCTTGCCCGTGTACACATTCCACCTCGATTGAATTCCGACTTCGGAAAGCAGCCAGCATAGCATGCTGCTTTCATGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCACGTCCGT]


>consensus_6533#0 CTGCATCGCCTCCTTTTCGTGAGCTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCG ATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTC GCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGAGGCCCTCCGCCTCTG CCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAA CACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCC TGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTG TACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCA ACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGT GGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTG CTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGA TTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAA GAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTA TTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAG TATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATG TTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGG CATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGT TTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCT TCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGT ACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCA TTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTAT CAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAA TCGGGCTATAACATGCGGACATGCATACTGTTGCACATCTCAAACTTGTGGTTTCAATCC ACTTTTTTAAGGCTTCAACCACAGATAGCTTTGGGTATTTCGACCTTCAAATTTTGCCTG TGAATCTGTGATCCTCCATTGACATTAGTAGTGCTGCTGTTCGTCGCTGCAACGCCCTGT AGATGTATATTCATGTTTGCAACGCAGTTCACTCGATTGCCCCAAAAAAAAAAAAATATC CCTCTCCATCCTCTAGCTATATGATTATTGCAATCACTCAGTTGGACCTCCTTTTTTCCT ATGGATTTGTAACCCATGTGTAAAATGAAGATTACCCCTTGCCCGTGTACACATTCCACC TCGATTGAATTCCGACTTCGGAAAGCAGCCAGCATAGCATGCTGCTTTCATGGGTTATGC AAAAAAAAAAAAAAAAAAAAAACACTGTCACGTCCGT



consensusID : consensus_6533#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1635
fasta sequence
                              [CTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCGATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTCGCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGCTCCACGCGTCGGGCGTCGGCGCCGTGGTCTGATCCGGCGAGTCGGACCAGGGGCCAGCAGCTAGCTGATCCGGGGAGTCGGACCAGGGGGCAGCGGCGAGGCGGGGCCTTCGAAGATGATGTCGCCGAGGCCCTCCGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAATCGGGGTAAGTTGCACCAAAAACCTTGGGTTCTATTGAGTGTGATATCAACCTACTATGTTTTGAATGAGGTTGTTATATACAGTAACACTAAGATCTCAGCTTCAAAAAATAGAGTTGCTTGGTATGCTGTTTGAAATTGAATTAGTATCGACTTCCATATGTTGGGTTTCAGTCATGGGGTGGAAAAAAGAACAACAGAGAAGCCTTGAATGTTAAACCAGTTTGTCTACTCATCTCATTAACACTATGATGCTAATTTGCCCTCTTA]

[+] EMBL AK106663             [CTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCGATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTCGCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGCTCCACGCGTCGGGCGTCGGCGCCGTGGTCTGATCCGGCGAGTCGGACCAGGGGCCAGCAGCTAGCTGATCCGGGGAGTCGGACCAGGGGGCAGCGGCGAGGCGGGGCCTTCGAAGATGATGTCGCCGAGGCCCTCCGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAATCGGGGTAAGTTGCACCAAAAACCTTGGGTTCTATTGAGTGTGATATCAACCTACTATGTTTTGAATGAGGTTGTTATATACAGTAACACTAAGATCTCAGCTTCAAAAAATAGAGTTGCTTGGTATGCTGTTTGAAATTGAATTAGTATCGACTTCCATATGTTGGGTTTCAGTCATGGGGTGGAAAAAAGAACAACAGAGAAGCCTTGAATGTTAAACCAGTTTGTCTACTCATCTCATTAACACTATGATGCTAATTTGCCCTCTTA]
[+] EMBL CF336029             [                                                                                                                                                                                                                                                                               GCCCTCCGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAGTTTGGTCTGTGTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_6533#1 CTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCGATCCAGATCGGAGAAGCCCAGCG CCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTCGCGCAGTCGAGCAGCATCACAGC GGGAAGGCTTAATTACCGCCGCTCCACGCGTCGGGCGTCGGCGCCGTGGTCTGATCCGGC GAGTCGGACCAGGGGCCAGCAGCTAGCTGATCCGGGGAGTCGGACCAGGGGGCAGCGGCG AGGCGGGGCCTTCGAAGATGATGTCGCCGAGGCCCTCCGCCTCTGCCGCACCGGAAGGCG GCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGCGAGGTCAACACCGTTGCAAGTTA TTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGTGTACTCCCTGTATAACTACCTGT CTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAGTTGCCTTGTACCTGCTTCAGTCA TCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCCTCTGCCCAACACACAGGTTGTTC CGACAGTTATCAATGGAGGAATTCTGGCATTGTACTTCGTGCTGTGGGGTAAAGGACTTC TTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTACGCAGGTGCTGTTCTTGGAGTTC TCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATGGAAGAAGATTGGTGGGCTCGCTG CTATGCTGGTAGCATACTATCTCTTAGGAAATGGATGGGCTACAAGAACACATTCACCAC TATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAACACAAGTTATTGGAATGAAAGAAA TGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTTGAGGAGAGTATTAGCTCGGCGGG TGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGCAATTAATGTTGCTTCTGCTACAT GTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCTGGGCTCGGCATCTGACAGCATAG TTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTACTGTTTTGTTTGGAATGGTGCTTA TATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCATCTGGTCTTCTCTTCTCCAAGAC ATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGAGATACTGTACAAAATGGATTTCT CCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGGATTTGGCATTTTTGAAGCAACAT CCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACATGAACTATCAAATGGATCATTTC ACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAAGTATTAAATCGGGGTAAGTTGCA CCAAAAACCTTGGGTTCTATTGAGTGTGATATCAACCTACTATGTTTTGAATGAGGTTGT TATATACAGTAACACTAAGATCTCAGCTTCAAAAAATAGAGTTGCTTGGTATGCTGTTTG AAATTGAATTAGTATCGACTTCCATATGTTGGGTTTCAGTCATGGGGTGGAAAAAAGAAC AACAGAGAAGCCTTGAATGTTAAACCAGTTTGTCTACTCATCTCATTAACACTATGATGC TAATTTGCCCTCTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6533#0      CTGCATCGCCTCCTTTTCGTGAGCTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCG 60
consensus_6533#1      -----------------------CTTCAAAACAGCGGGGAAGAAAAGAAAAGAAAAATCG 37
                                             *************************************

consensus_6533#0      ATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTC 120
consensus_6533#1      ATCCAGATCGGAGAAGCCCAGCGCCGCCCCTCCGCCCGCCGCCGCCGCCGCCGCCGCCTC 97
                      ************************************************************

consensus_6533#0      GCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCG---------------- 164
consensus_6533#1      GCGCAGTCGAGCAGCATCACAGCGGGAAGGCTTAATTACCGCCGCTCCACGCGTCGGGCG 157
                      ********************************************                

consensus_6533#0      ------------------------------------------------------------
consensus_6533#1      TCGGCGCCGTGGTCTGATCCGGCGAGTCGGACCAGGGGCCAGCAGCTAGCTGATCCGGGG 217
                                                                                  

consensus_6533#0      ----------------------------------------------------AGGCCCTC 172
consensus_6533#1      AGTCGGACCAGGGGGCAGCGGCGAGGCGGGGCCTTCGAAGATGATGTCGCCGAGGCCCTC 277
                                                                          ********

consensus_6533#0      CGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGC 232
consensus_6533#1      CGCCTCTGCCGCACCGGAAGGCGGCGGCGGTGCCTCCACCTCCCGCTCGGTGCCCACGGC 337
                      ************************************************************

consensus_6533#0      GAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGT 292
consensus_6533#1      GAGGTCAACACCGTTGCAAGTTATTCATATTTTGGGAAACTTTGCTAGAATTTGGTCTGT 397
                      ************************************************************

consensus_6533#0      GTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAG 352
consensus_6533#1      GTACTCCCTGTATAACTACCTGTCTAGTAGTGGGGATTCAATGGTCGGCTTCATCTTCAG 457
                      ************************************************************

consensus_6533#0      TTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCC 412
consensus_6533#1      TTGCCTTGTACCTGCTTCAGTCATCTTCCTGGCTTTGCAGAAGCCTTGGAAAGGCCGGCC 517
                      ************************************************************

consensus_6533#0      TCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTT 472
consensus_6533#1      TCTGCCCAACACACAGGTTGTTCCGACAGTTATCAATGGAGGAATTCTGGCATTGTACTT 577
                      ************************************************************

consensus_6533#0      CGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTA 532
consensus_6533#1      CGTGCTGTGGGGTAAAGGACTTCTTGCTTGCGGACCACTTGTCGCTCTGCTGGCGGAGTA 637
                      ************************************************************

consensus_6533#0      CGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATG 592
consensus_6533#1      CGCAGGTGCTGTTCTTGGAGTTCTCTCAGCTGCTTTATATGGAAGGAAAGTTAACATATG 697
                      ************************************************************

consensus_6533#0      GAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATG 652
consensus_6533#1      GAAGAAGATTGGTGGGCTCGCTGCTATGCTGGTAGCATACTATCTCTTAGGAAATGGATG 757
                      ************************************************************

consensus_6533#0      GGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAAC 712
consensus_6533#1      GGCTACAAGAACACATTCACCACTATATAGCTTTGGAAGTGAATCACTGGAGAAGGGAAC 817
                      ************************************************************

consensus_6533#0      ACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTT 772
consensus_6533#1      ACAAGTTATTGGAATGAAAGAAATGGTGGTCCCACTTACTGCTGGAATTTTATCTGCTTT 877
                      ************************************************************

consensus_6533#0      GAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGC 832
consensus_6533#1      GAGGAGAGTATTAGCTCGGCGGGTGTCCCTTAAGAATCAACTTAAAAGGCGACTTCATGC 937
                      ************************************************************

consensus_6533#0      AATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCT 892
consensus_6533#1      AATTAATGTTGCTTCTGCTACATGTTTTCTTTTTCCTTTTGCAATGTGGGATACAATCCT 997
                      ************************************************************

consensus_6533#0      GGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTAC 952
consensus_6533#1      GGGCTCGGCATCTGACAGCATAGTTAAACTGCAGTTTCCAAGCTGGGCGTACTTGAGTAC 1057
                      ************************************************************

consensus_6533#0      TGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCA 1012
consensus_6533#1      TGTTTTGTTTGGAATGGTGCTTATATTCTATGTTGACAATGTTGCCGAGGAAAAATTGCA 1117
                      ************************************************************

consensus_6533#0      TCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGA 1072
consensus_6533#1      TCTGGTCTTCTCTTCTCCAAGACATCTAATGGTTTCAACAGGTTGCATCATTGTTTTGGA 1177
                      ************************************************************

consensus_6533#0      GATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGG 1132
consensus_6533#1      GATACTGTACAAAATGGATTTCTCCCTTTTGGGCTTTCTGCTTTGTTCAGTGATTTTAGG 1237
                      ************************************************************

consensus_6533#0      ATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACA 1192
consensus_6533#1      ATTTGGCATTTTTGAAGCAACATCCTTGGAGCGCTCGAAGAAAAGTCCTTTGGAGGCACA 1297
                      ************************************************************

consensus_6533#0      TGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAA 1252
consensus_6533#1      TGAACTATCAAATGGATCATTTCACAACCAGTTGCCAATTTCTGCACTTCCAAGCTAAAA 1357
                      ************************************************************

consensus_6533#0      GTATTAAATCGGGCTATAACATGCGGACATGCATACTGTTGCACATCTCAAACTTGTGGT 1312
consensus_6533#1      GTATTAAATCGGGGTAAGTTGCACCAAAA-----ACCTTGGGTTCTATTGAG--TGTGAT 1410
                      ************* **       *  * *     **  * *    * *  *   **** *

consensus_6533#0      TTCAATCCACTTTTTTAAGGCTTCAACCACAGATAGCTTTGGGTATTTCGACCTTCAAAT 1372
consensus_6533#1      ATCAACCTACTAT------GTTTTGAATGAGGTTG---TTATATACAGTAACACTAAGAT 1461
                       **** * *** *      * **  *     * *    **   **     **  * * **

consensus_6533#0      TTTGCCTGTGAATCTGTGATCCTCCATTGACATTAGTAGTGCTGCTGTTCGTCGCTGCAA 1432
consensus_6533#1      CTCAGCTTCAAAAAATAGAGTTGC--TTGGTAT----GCTGTTTGAAATTGAATTAGTAT 1515
                       *   **   **     **    *  ***  **      ** *     * *     * * 

consensus_6533#0      CGCCCTGTAGATGTATATTCATGTTTGCAACGCAGTTCACTCGATTGCCCCAAAAAAAAA 1492
consensus_6533#1      CGACTTCCATATGT---TGGGTTTCAGTCATGGGGTGGAAAAAAGAACAACAGAGAAGCC 1572
                      ** * *  * ****   *   * *  *  * *  **  *    *   *  ** * **   

consensus_6533#0      A-AAATATCCCTCTCCATCCTCTAGCTATATGATTATTGCAATCACTC-AGTTGGACCTC 1550
consensus_6533#1      TTGAATGTTAAACCAGTTTGTCTACTCATCTCATTAACACTATGATGCTAATTTGCCCTC 1632
                         *** *    *    *  ****   ** * ****   * ** *  * * ** * ****

consensus_6533#0      CTTTTTTCCTATGGATTTGTAACCCATGTGTAAAATGAAGATTACCCCTTGCCCGTGTAC 1610
consensus_6533#1      TTA--------------------------------------------------------- 1635
                       *                                                          

consensus_6533#0      ACATTCCACCTCGATTGAATTCCGACTTCGGAAAGCAGCCAGCATAGCATGCTGCTTTCA 1670
consensus_6533#1      ------------------------------------------------------------
                                                                                  

consensus_6533#0      TGGGTTATGCAAAAAAAAAAAAAAAAAAAAAACACTGTCACGTCCGT 1717
consensus_6533#1      -----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)