cluster # 6557

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Oryza sativa
cluster # 6557 cluster # 6557 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6557#0 length = 880 sequences # 4
consensusID : consensus_6557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 880
fasta sequence
                              [TATCCGTAGGGTCATACGAGATGATGTGGCCTATGCTGCTGTTCAATCTTACCCTGGTGAGTATAGGCCTGACTGGGGTCGAATGAGCTTCCTAGTAGACATTTTGAGGCCAACTCCTGGAGAGGGACCTTCATGGTACCATCTACTGAAGAAAGCTAGTGGTGGTTGCAATGATCTTATGTACAGTGGGCACATGCTTGTTGCTGTTCTTACTGCAATGGCGTGGACGGAAGCATACGGGGGCTGGATCTCCGTCGCAATATGGCTTCTTGTCCTGCATAGCGCGCAAAGGGAGATACGAGAACGCCATCACTACACCGTGGATTGTGTCGTGGCGATCTACGTCGGCATACTCCTGTGGAGGATGACGAGGTTCATCTGGTCTGCCAGAGACGCCAGCCGAGCTAGAAGGCTCGCCAAACTCGATGAGGT-TCAGAACA-GGCTAATCCATGCGGCGAAGGA-CTCGGACGTCGATGAGATCAGAGGCCTGCTGAAAGAGGTTGAACTGGCCGGCCAAGAAAAG-CAGGGCGTCTCGCAGAGGGCCATCCTGGCCTTCGCCGCGGCTACGATCATTTTCACCCTGACCTGTGTTGTCCTTGCCTTGACATTAACCAGCGACGGGTGATTTCAGCTACTAGCTTTCTTGGAATCCTCTGAATGTCAACCCCCTTTTTCCA-GGGTTATAGTG-TTGTTTCTCTAGATTCAGATCCTTGAGTGTTGCTTGTTGTAGGATGCATGG-TTTTAA-CA-GAGAT-GTAA-CTTGAGCTGAGTGAGTGCCGATAGGATTCAGAGTTTCAGACCGATGGCGTATGTTTTGGGCGAAAGTAGCTTTTTGCAGCTGTATGGAGAATC-TGGTTGTTCTATCATATGATGCTCTGNAATG]

[+] EMBL CA757396             [TATCCGTAGGGTCATACGAGATGATGTGGCCTATGCTGCTGTTCAATCTTACCCTGGTGAGTATAGGCCTGACTGGGGTCGAATGAGCTTCCTAGTAGACATTTTGAGGCCAACTCCTGGAGAGGGACCTTCATGGTACCATCTACTGAAGAAAGCTAGTGGTGGTTGCAATGATCTTATGTACAGTGGGCACATGCTTGTTGCTGTTCTTACTGCAATGGCGTGGACGGAAGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB096588             [                                                                                                                        AGGGGGACCTTCATGGTACCATCTACTGAAGAAAGCTAGTGGTGGTTGCAATGATCTTATGTACAGTGGGCACATGCTTGTTGCTGTTCTTACTGCAATGGCGTGGACGGAAGCATACGGGGGCTGGATCTCCGTCGCAATATGGCTTCTTGTCCTGCATAGCGCGCAAAGGGAGATACGAGAACGCCATCACTACACCGTGGATTGTGTCGTGGCGATCTACGTCGGCATACTCCTGTGGAGGATGACGAGGTTCATCTGGTCTGCCAGAGACGCCAGCCGAGCTAGAAGGCTTGCCAAACTCGATGAGGT TCAGAACA GGCTAATTCATGCGGCGAAGGA CTCGGACGTCGATGAGATCAGAGGCCTGCTGAAAGAGGTTGAACTGGCCGGCCAAGAAAAG CAGGGCGTCTCGCAGAGGGCCATCCTGGCCTTCGCCGCGGCTACGATCATTTTCACCCTGACCTGTGTTGTCCTTGCCTTGACATTAACCAGCGACGGGTGATTTCAGCTACTAGCTTTCTTGGAATCCTCTGAATGTCAACCCCCTTTTTCCA GGGTTATAGTG TTGTTTCTCTAGATTCAGATCCTTGAGTGTTGCTTGTTGTAGGATGCATGG TTTTAA CA GAGAT GTAA CTTGAGCTGAGTGAGTGCCGATAGGATTCAGAGTTTCAGACCGATGGCGTATGTTTTGGGCGAAAGTAGCTTTTTGCAGCTGTATGGA NATCTTGGTTGGTCTATCATATGATGCTCTGNAATG]
[+] EMBL CB096804             [                                                                                                                                                                                                                               aGGAC GAGACA AGGGGGGCTGGATCTCCGTCGCAATATGGCTTCTTGTCCTGCATAGCGCGCAAAGGGAGATACGAGAACGCCATCACTACACCGTGGATTGTGTCGTGGCGATCTACGTCGGCATACTCCTGTGGAGGATGACGAGGTTCATCTGGTCTGCCAGAGACGCCAGCCGAGCTAGAAGGCTCGCCAAACTCGATGAGGT TCAGAACA GGCTAATCCATGCGGCGAAGGA CTCGGACGTCGACGAGATCAGAGGCCTGCTGAAAGAGGTTGAACTGGCCGGCCAAGAAAAG CAGGGCGTCTCGCAGAGGGCCATCCTGGCCTTCGCCGCGGCTACGATCATTTTCACCCTGACCTGTGTTGTCCTTGCCTTGACATTAACCAGCGACGGGTGATTTCAGCTACTAGCTTTCTTGGAATCCTCTGAATGTCAACCCCCTTTTTCCA GGGTTATAGTG TTGTTTCTCTAGATTCAGATCCTTGAGTGTTGCTTGTTGTAGGATGCATGG TTTTAA CA GAGAT GTAA CTTGAGCTGAGTGAGTGCCGATAGGATTCAGAGTTTCAGACCGATGGCGTATGTTTTGGGCGAAAGTAGCTTTTTGCAGCTGTATGGAGAATC TGGTTGTTCTATC                  ]
[+] EMBL BQ907325             [                                                                                                                                                                                                                                                                                                                                                                                                           CCAGCCGAGCTAGAAGGCTCGCCCAACTCGATGAGGTCTCAGAACACGGCTAATCCATGCGGCGAAGGAGCTCGGACGTCGATGAGATCAGAGGCCTGCTGAAAGAGGTTGAACTGGCCGGCCAAGAAAAGCCAGGGCNTCTCNCAGAGGGCCATCCTGGCCTTCGCCGCGGCTACGATCATTTTCACCCTGACCTGTGTTGTCCTTGCCTTGACATTAACCAGCGACGGGTGATTTCAGCTACTAGCTTTCTTGGAATCCTCTGAATGTCAACCCCCTTTTTCCACGGGTTATAGTGCTTGTTTCTCTAGATTCAGATCCTTGAGTGTTGCTTGTTGTAGGATGCATGGCTTTTAACCACGAGATCGTAACCTTGAGCTGAGTGAGTGCCGATAGGATTCAGAGTTTCAGACCGATGGCGTATGTTTTGGGCGAAAGTAGCTTTTTGCAGCTGTATGGAGAATC TGGTTGTTCTATCAaaaa             ]




>consensus_6557#0
TATCCGTAGGGTCATACGAGATGATGTGGCCTATGCTGCTGTTCAATCTTACCCTGGTGA
GTATAGGCCTGACTGGGGTCGAATGAGCTTCCTAGTAGACATTTTGAGGCCAACTCCTGG
AGAGGGACCTTCATGGTACCATCTACTGAAGAAAGCTAGTGGTGGTTGCAATGATCTTAT
GTACAGTGGGCACATGCTTGTTGCTGTTCTTACTGCAATGGCGTGGACGGAAGCATACGG
GGGCTGGATCTCCGTCGCAATATGGCTTCTTGTCCTGCATAGCGCGCAAAGGGAGATACG
AGAACGCCATCACTACACCGTGGATTGTGTCGTGGCGATCTACGTCGGCATACTCCTGTG
GAGGATGACGAGGTTCATCTGGTCTGCCAGAGACGCCAGCCGAGCTAGAAGGCTCGCCAA
ACTCGATGAGGTTCAGAACAGGCTAATCCATGCGGCGAAGGACTCGGACGTCGATGAGAT
CAGAGGCCTGCTGAAAGAGGTTGAACTGGCCGGCCAAGAAAAGCAGGGCGTCTCGCAGAG
GGCCATCCTGGCCTTCGCCGCGGCTACGATCATTTTCACCCTGACCTGTGTTGTCCTTGC
CTTGACATTAACCAGCGACGGGTGATTTCAGCTACTAGCTTTCTTGGAATCCTCTGAATG
TCAACCCCCTTTTTCCAGGGTTATAGTGTTGTTTCTCTAGATTCAGATCCTTGAGTGTTG
CTTGTTGTAGGATGCATGGTTTTAACAGAGATGTAACTTGAGCTGAGTGAGTGCCGATAG
GATTCAGAGTTTCAGACCGATGGCGTATGTTTTGGGCGAAAGTAGCTTTTTGCAGCTGTA
TGGAGAATCTGGTTGTTCTATCATATGATGCTCTGNAATG
clustalw multiple alignements is not computed in this case