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Oryza sativa
cluster # 658 cluster # 658       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_658#0 length = 2784 sequences # 1  
 consensus_658#1 length = 1093 sequences # 1  
consensusID : consensus_658#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2784
fasta sequence 
                              [TCTCGCTTCAAACCTCCCCTAAAAAAAGGCGTCCCCCGCCGCTGCGCCGCTCTCTCCCTTCTTCCCCGCAGCAAAAGTAGTTCTTCGCGGAGAAGCGGGAGAATCCCCGGCCGGTGATCCCAATCTGGAGCGGGAGGGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACCTCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATACTGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAACATACAGATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGAAGTTGGTTGCTTCTTCAGTTGAAGACAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAACGTTGAGCAGCTCAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTTTTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGAAATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGATGGTTCCCATGACGGGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCGTACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGGCAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTGTCTTGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGATCACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTGCACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCTACACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGAAGCCTCAGAAGACTTTGTTCAATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTGATGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACATCAACTGCAGCAGTGACACCGGTTAGAAACAGTAACTCGTTTGATGATCCTCCTAGTCTATCACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGCCACATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCGAAAAGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGACATAGCTCCATATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAACAAGTCGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACAACTACATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGGTTGCAATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACTCAATAATAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAAGAAATAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACTTGAGTTACAACAGAATAACTAAAATTGGCCATGGCTTGGCCTCCTGTCCTTTCCTGAAGGAGCTGTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGAAGGTGCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCAACTGCGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCGACGAGCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGCAGGCAGTGCGGTCACGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGGCCGTCGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGAGGCTTCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACCATGTCAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCCGGAATAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAGAGAGGAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATGACCTATGAATTTTTCTCAATTTTGCTGCATCACCACAAAATTTTCGTTTCATTTGTGGGTTCGAGAACTTTTTATCTTGTTTTGATTCTTTTTTTTTCATTCATGAAATTGTTAGCATGAATGAAAATAGTAGCCATAGTTGTGGCATGAACTATTTGCTGCATTTTTTTTTTTTTTTGGCAGTGATACGAAAGAATTGCTAGATGGTAGTAGTATAATGGAATTTGCAGCATGATGATACGTTCTATTCAGAAACACATAATGTAAT]

[+] EMBL AK100270             [TCTCGCTTCAAACCTCCCCTAAAAAAAGGCGTCCCCCGCCGCTGCGCCGCTCTCTCCCTTCTTCCCCGCAGCAAAAGTAGTTCTTCGCGGAGAAGCGGGAGAATCCCCGGCCGGTGATCCCAATCTGGAGCGGGAGGGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACCTCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATACTGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAACATACAGATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGAAGTTGGTTGCTTCTTCAGTTGAAGACAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAACGTTGAGCAGCTCAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTTTTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGAAATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGATGGTTCCCATGACGGGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCGTACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGGCAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTGTCTTGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGATCACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTGCACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCTACACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGAAGCCTCAGAAGACTTTGTTCAATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTGATGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACATCAACTGCAGCAGTGACACCGGTTAGAAACAGTAACTCGTTTGATGATCCTCCTAGTCTATCACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGCCACATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCGAAAAGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGACATAGCTCCATATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAACAAGTCGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACAACTACATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGGTTGCAATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACTCAATAATAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAAGAAATAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACTTGAGTTACAACAGAATAACTAAAATTGGCCATGGCTTGGCCTCCTGTCCTTTCCTGAAGGAGCTGTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGAAGGTGCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCAACTGCGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCGACGAGCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGCAGGCAGTGCGGTCACGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGGCCGTCGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGAGGCTTCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACCATGTCAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCCGGAATAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAGAGAGGAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATGACCTATGAATTTTTCTCAATTTTGCTGCATCACCACAAAATTTTCGTTTCATTTGTGGGTTCGAGAACTTTTTATCTTGTTTTGATTCTTTTTTTTTCATTCATGAAATTGTTAGCATGAATGAAAATAGTAGCCATAGTTGTGGCATGAACTATTTGCTGCATTTTTTTTTTTTTTTGGCAGTGATACGAAAGAATTGCTAGATGGTAGTAGTATAATGGAATTTGCAGCATGATGATACGTTCTATTCAGAAACACATAATGTAAT]




>consensus_658#0
TCTCGCTTCAAACCTCCCCTAAAAAAAGGCGTCCCCCGCCGCTGCGCCGCTCTCTCCCTT
CTTCCCCGCAGCAAAAGTAGTTCTTCGCGGAGAAGCGGGAGAATCCCCGGCCGGTGATCC
CAATCTGGAGCGGGAGGGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGT
CTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACC
TCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATAC
TGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAACATACA
GATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTG
CTTCTCTTATTCGTCCCGCCATCACCGATCAAAGAAGTTGGTTGCTTCTTCAGTTGAAGA
CAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAA
CGTTGAGCAGCTCAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTT
TTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGA
AATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGA
TGGTTCCCATGACGGGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCG
TACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGG
CAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTG
TCTTGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGATC
ACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTGC
ACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCTA
CACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGAAGCCTCAGAAGACTTTGTTCA
ATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTGA
TGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACATC
AACTGCAGCAGTGACACCGGTTAGAAACAGTAACTCGTTTGATGATCCTCCTAGTCTATC
ACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGCCAC
ATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCGAAA
AGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGACAT
AGCTCCATATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAACAAGT
CGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACAACTA
CATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGGTTGC
AATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACTCAAT
AATAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAAGAAA
TAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACTTGAG
TTACAACAGAATAACTAAAATTGGCCATGGCTTGGCCTCCTGTCCTTTCCTGAAGGAGCT
GTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGAAGGT
GCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCAACTG
CGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCGACGA
GCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGCAGGC
AGTGCGGTCACGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGGCCGT
CGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGAGGCT
TCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACCATGT
CAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCCGGAA
TAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAGAGAG
GAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATGACCT
ATGAATTTTTCTCAATTTTGCTGCATCACCACAAAATTTTCGTTTCATTTGTGGGTTCGA
GAACTTTTTATCTTGTTTTGATTCTTTTTTTTTCATTCATGAAATTGTTAGCATGAATGA
AAATAGTAGCCATAGTTGTGGCATGAACTATTTGCTGCATTTTTTTTTTTTTTTGGCAGT
GATACGAAAGAATTGCTAGATGGTAGTAGTATAATGGAATTTGCAGCATGATGATACGTT
CTATTCAGAAACACATAATGTAAT

consensusID : consensus_658#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1093
fasta sequence 
                              [TCACTAAATGCTGGTGGTTCGTTCTTGGTTCTTGCCAGAGAAGATTTGCGTGGTTGCATATTGCGATGACGACACGTGGTCTGTGTTACCCCCGCTTAATAACCCTGTCGGTTTCTCTGTTCATCTTGGCGAATTTGGTCGTTGATTTGATGATGATAACCGTTTTGCGTGATATCGTGTGTGAAGATGCAGTTATGTTTCTCCGTTTGCGGTGGGAGGTTTCGCGATCTCTTTCTGTTGGCTGTGATAAATCCCCGCGGTGTCAGTGGAAGGTTTTTGCGATCTCTTTGTTGGTTGCGATAAATCCCGCGGTGTCAGGTTGGAATTTGGGTGCCCTTGGTTGCGTTAGTCTTTCCTGTTCATGATGCCGATCGAATTGGTTCAGGATACGTGTGATATTATACTCCATCGATCGAGTTCGTTGTTTCCAGTTTCTACCGCATAACAAAACCCAGGACATTTTCGTTTGAATCGTTGAACAGCAGTCCGATTGTGAATTTTCTTTTCTCTTTACAATGAAATTTCACAAAGTATCTGCACTCTGCTATCGCTGTTCTTTTGCAAGGGCTATCACAGGACACTGTACTCTGTTCATTTTCATGTTTCTGCCTGGATTATGTGTCAAATCAACCGCATGACTAATTCAGCATATATCACTGTATTGATATGTACTTCTCTAGACAGCTGTGACATTGTTGTTTTAAATCTTTTGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACCTCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATACTGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAGCATACAGATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGGTACACAAATTCGTCCACTACTGTTTGTGTTATTCTGCACCTTATGCTGCCACCAGCATTTAGTG]

[+] EMBL AB021957             [TCACTAAATGCTGGTGGTTCGTTCTTGGTTCTTGCCAGAGAAGATTTGCGTGGTTGCATATTGCGATGACGACACGTGGTCTGTGTTACCCCCGCTTAATAACCCTGTCGGTTTCTCTGTTCATCTTGGCGAATTTGGTCGTTGATTTGATGATGATAACCGTTTTGCGTGATATCGTGTGTGAAGATGCAGTTATGTTTCTCCGTTTGCGGTGGGAGGTTTCGCGATCTCTTTCTGTTGGCTGTGATAAATCCCCGCGGTGTCAGTGGAAGGTTTTTGCGATCTCTTTGTTGGTTGCGATAAATCCCGCGGTGTCAGGTTGGAATTTGGGTGCCCTTGGTTGCGTTAGTCTTTCCTGTTCATGATGCCGATCGAATTGGTTCAGGATACGTGTGATATTATACTCCATCGATCGAGTTCGTTGTTTCCAGTTTCTACCGCATAACAAAACCCAGGACATTTTCGTTTGAATCGTTGAACAGCAGTCCGATTGTGAATTTTCTTTTCTCTTTACAATGAAATTTCACAAAGTATCTGCACTCTGCTATCGCTGTTCTTTTGCAAGGGCTATCACAGGACACTGTACTCTGTTCATTTTCATGTTTCTGCCTGGATTATGTGTCAAATCAACCGCATGACTAATTCAGCATATATCACTGTATTGATATGTACTTCTCTAGACAGCTGTGACATTGTTGTTTTAAATCTTTTGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACCTCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATACTGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAGCATACAGATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGGTACACAAATTCGTCCACTACTGTTTGTGTTATTCTGCACCTTATGCTGCCACCAGCATTTAGTG]




>consensus_658#1
TCACTAAATGCTGGTGGTTCGTTCTTGGTTCTTGCCAGAGAAGATTTGCGTGGTTGCATA
TTGCGATGACGACACGTGGTCTGTGTTACCCCCGCTTAATAACCCTGTCGGTTTCTCTGT
TCATCTTGGCGAATTTGGTCGTTGATTTGATGATGATAACCGTTTTGCGTGATATCGTGT
GTGAAGATGCAGTTATGTTTCTCCGTTTGCGGTGGGAGGTTTCGCGATCTCTTTCTGTTG
GCTGTGATAAATCCCCGCGGTGTCAGTGGAAGGTTTTTGCGATCTCTTTGTTGGTTGCGA
TAAATCCCGCGGTGTCAGGTTGGAATTTGGGTGCCCTTGGTTGCGTTAGTCTTTCCTGTT
CATGATGCCGATCGAATTGGTTCAGGATACGTGTGATATTATACTCCATCGATCGAGTTC
GTTGTTTCCAGTTTCTACCGCATAACAAAACCCAGGACATTTTCGTTTGAATCGTTGAAC
AGCAGTCCGATTGTGAATTTTCTTTTCTCTTTACAATGAAATTTCACAAAGTATCTGCAC
TCTGCTATCGCTGTTCTTTTGCAAGGGCTATCACAGGACACTGTACTCTGTTCATTTTCA
TGTTTCTGCCTGGATTATGTGTCAAATCAACCGCATGACTAATTCAGCATATATCACTGT
ATTGATATGTACTTCTCTAGACAGCTGTGACATTGTTGTTTTAAATCTTTTGCAGCGCTG
GTTATATAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCAC
TCTGGCTGTTACACAAAAGCTGCTGGTGTGCACCTCTAGGCTGGCTGTTCAATTTTCTTC
TGGAGGAAACCCATATTGCATTTGCTGGTCATACTGTCTGCTGGGGTTTTCCTTTGATTA
TGGTTAACTCTGGTAGATCAGAACGAAGCATACAGATACACTAACCAGTATCTTGCAATT
GCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACC
GATCAAAGGTACACAAATTCGTCCACTACTGTTTGTGTTATTCTGCACCTTATGCTGCCA
CCAGCATTTAGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_658#0      TCTCGCTTCAAACCTCCCCTAAAAAAAGGCGTCCCCCGCCGCTGCGCCGCTCTCTCCCTT 60
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CTTCCCCGCAGCAAAAGTAGTTCTTCGCGGAGAAGCGGGAGAATCCCCGGCCGGTGATCC 120
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CAATCTGGAGCGGGAGGGCAGCGCTGGTTATATAGCACTGTTGTGTTGGATCTGTCAGGT 180
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CTGACAGATAATTTTTTTTCTTCCACTCTGGCTGTTACACAAAAGCTGCTGGTGTGCACC 240
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TCTAGGCTGGCTGTTCAATTTTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTCATAC 300
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TGTCTGCTGGGGTTTTCCTTTGATTATGGTTAACTCTGGTAGATCAGAACGAAACATACA 360
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      GATACACTAACCAGTATCTTGCAATTGCTCACTGAAGTTGAAAATGGTTCGGTTCTCTTG 420
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CTTCTCTTATTCGTCCCGCCATCACCGATCAAAGAAGTTGGTTGCTTCTTCAGTTGAAGA 480
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAA 540
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CGTTGAGCAGCTCAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTT 600
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGA 660
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      AATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGA 720
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TGGTTCCCATGACGGGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCG 780
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGG 840
consensus_658#1      ---------------------------------TCAC--TAAATGCTGGTGGTTCGTTCT 25
                                                      ***   * * **   **  * * **  

consensus_658#0      CAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTG 900
consensus_658#1      TGGTTCT-----TGCCAGAGAAGATTTGCGTGGTTGC-ATATTGCGATGACGACACGTGG 79
                        ****     *  **  *** *     *** ***  *   *    ** * **   * *

consensus_658#0      TCT-TGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGAT 959
consensus_658#1      TCTGTGTTACCCCCGCTTAATAACC----CTGTCGGTTTCTCTGTTCATCTTG-GCGAAT 134
                     *** *** * * * *   *  *  *     ** * *   *** *    * *** **  **

consensus_658#0      CACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTG 1019
consensus_658#1      T--------TGGTCGTTGATTTGATGATGATAACCGTTTT---GCGTGATATCG--TGTG 181
                              **  * ***** **   **    *****  *      *  *** *  * **

consensus_658#0      CACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCT 1079
consensus_658#1      TGAAGATGCAGTTATGTTTC--TCCGTTTGCGGTGGGAGGTTTCGC-----GATCTCTTT 234
                        *  *   **** ***      * **** *     * ***         ** * *  *

consensus_658#0      ACACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGAAGCCTCAGAAGACTTTGTTC 1139
consensus_658#1      CTGTTGGCTGTGATAAATCCCCGCGGTGTCAGTG-GAAGGTTTTTGCGATCTCTTTGTTG 293
                         **     * ** *    * *   **** **  ***     *  **   ******* 

consensus_658#0      AATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTG 1199
consensus_658#1      GTTGCGATAAATC-CCGCGGTGTCAG-GTTGGAATTTGGGTGCCCTTGGTTGCGTTAGTC 351
                       * * **  *    * * ******  ** *  **     *  *     * *    * * 

consensus_658#0      ATGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACAT 1259
consensus_658#1      TTTCCTGTTCATGATGCCG-ATCGAATTGGTTCAGGATACGTGTGATATT-ATACTCCAT 409
                      *     ****   **  *  * ****  *   * **      * **    **  * ***

consensus_658#0      CAACTGCAGCAGT-GACACCGGTTAGAAACA-GTAACTCGTTTGATGATCCTCCTAGTCT 1317
consensus_658#1      CGATCGAGTTCGTTGTTTCCAGTTTCTACCGCATAACAAAACCCAGGA-CATTTTCGTTT 468
                     * *  *     ** *   ** ***   * *   ****       * ** * *  * ** *

consensus_658#0      ATCACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGC 1377
consensus_658#1      GAATCGTTGAACAG-CAGT-CCGATTGTGAATTTTCTTTTCTCTTTACAATGAAATTT-- 524
                         * *    *** ** * * **      ****       *   ** **   ** **  

consensus_658#0      CACATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCG 1437
consensus_658#1      CACA------AAGTAT-------CTGCACTCTGCTATCGCTGTTCTTTTGCAAGGGCTAT 571
                     ****      *** **       *** **  ** ** *    ** **   *   * *   

consensus_658#0      AAAAGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGA 1497
consensus_658#1      CACAGGACACTGTACTCTGTTCATTTTCA--TGTTTCTGCCTGGATTATGTGTCAAAT-- 627
                      * ** *  *  *  *  *   ***   *  **  ** ***    *  **  ******  

consensus_658#0      CATAGCTCCAT-ATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAAC 1556
consensus_658#1      --CAACCGCATGACTAATTCAGCATATATCACTGTATTG-ATATGTACTT--CTCTAGAC 682
                        * *  *** *  **    *   ** *    **  **   ** ** *    ** * **

consensus_658#0      AAGTCGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACA 1616
consensus_658#1      AG-------CTGTGACATTGTT--GTTTTAAATCTTTT----GCAGCG---CTGGTTATA 726
                     *        ** * * *  * *   *  *******  *    ***  *   *** *** *

consensus_658#0      ACTACATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGG 1676
consensus_658#1      -TAGCACTGTTGTGTTGGATCTGTCAGGTCTGACAGATAATTTTTTTTCTTCCACTCTGG 785
                         **  *   ** ** * *  ***  *   * **   * ** * *  *       ***

consensus_658#0      TTGCAATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACT 1736
consensus_658#1      CTGTTACACAAAAGCT----------GCTGGTGTGCACCT-CTAGGCTGGCTGTTCAATT 834
                      **  * ** **  **            ** * ***  ** **   ** *      ** *

consensus_658#0      CAATAATAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAA 1796
consensus_658#1      TTCTTCTGGAGGAAACCCATATTGCATTTGCTGGTC-ATACTGTCTGCTGGGGTTTTCCT 893
                        *  *   *  ***       *** ** *      *  * *  ** *     * **  

consensus_658#0      GAAATAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACT 1856
consensus_658#1      TTGATTATG-GTTAACTCTGGTAGATCAGAACGAAGC-ATACAGATACACTAACCAG--- 948
                        ** *    * ***  * * **  *  ** **    * **   * *     *  *   

consensus_658#0      TGAGTTACAACAGAATAACTAAAATTGGCCATGGCTTGGCCTCCTGTCCTTTCCTGAAGG 1916
consensus_658#1      TATCTTGCAATTGC-TCACTGAAGTTGAAAATGGTTCGGTTCTCTTGCTTCTCTTATTCG 1007
                     *   ** ***  *  * *** ** ***   **** * **    **  * * ** *    *

consensus_658#0      AGCTGTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGA 1976
consensus_658#1      TCCCGC-CATCACCGATCA-AAGGTACACAAATTCG----TCCACTACTGTTTGTGTT-A 1060
                       * *  ****  **   * *** *   * *  * *     *  *  *   *   * * *

consensus_658#0      AGGTGCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCA 2036
consensus_658#1      TTCTGCACCTTATGC-TGCCACCAGCATTTAGTG-------------------------- 1093
                        *** *    ***  * ** **** * *  *                           

consensus_658#0      ACTGCGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCG 2096
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      ACGAGCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGC 2156
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      AGGCAGTGCGGTCACGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGG 2216
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CCGTCGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGA 2276
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      GGCTTCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACC 2336
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      ATGTCAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCC 2396
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      GGAATAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAG 2456
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      AGAGGAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATG 2516
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      ACCTATGAATTTTTCTCAATTTTGCTGCATCACCACAAAATTTTCGTTTCATTTGTGGGT 2576
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      TCGAGAACTTTTTATCTTGTTTTGATTCTTTTTTTTTCATTCATGAAATTGTTAGCATGA 2636
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      ATGAAAATAGTAGCCATAGTTGTGGCATGAACTATTTGCTGCATTTTTTTTTTTTTTTGG 2696
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CAGTGATACGAAAGAATTGCTAGATGGTAGTAGTATAATGGAATTTGCAGCATGATGATA 2756
consensus_658#1      ------------------------------------------------------------
                                                                                 

consensus_658#0      CGTTCTATTCAGAAACACATAATGTAAT 2784
consensus_658#1      ----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)