These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6580#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2508 fasta sequence [TCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCTCCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCCTCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGGAGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCCGCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCCCTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCGACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCGCCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAGAGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCGACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGGTGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGGCGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACTTGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGTACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA-CCATGGAAGAATACTTGAAGCAT-GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC--ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA-TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCAGCTTCCCCTTAATTTCTGCGCCCAAAAAAAAAA] [+] EMBL AK067162 [TCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCTCCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCCTCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGGAGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCCGCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCCCTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCGACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCGCCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAGAGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCGACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGGTGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGGCGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACTTGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGTACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA CCATGGAAGAATACTTGAAGCAT GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCAGCTTCCCCTTAAT ] [+] EMBL CK085098 [ CCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACATGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGA ] [+] EMBL AK058225 [ ACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA CCATGGAAGAATACTTGAAGCAT GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGGCTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCA ] [+] EMBL BM419459 [ GGATGATATGCT GCGGGATTAGGGTGGACCCATGGAAGAATACTTGAAGCATGGGCACAAATGATTATTACCCACCACTGCCGAANGGACATAGGATATTCCTACANATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGGCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATCCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGAGTGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTACGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTAC AAATATATGCAATGCAGCTTCCCCTTAATTTCTGCGCCCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||