These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1014 fasta sequence [TGTGACGACGTCTCGTCTCGTCTCCCTCTCCCGACCCGACACCCGAGTCTTCTTCCCTTCCCCAATCTCGCCCTTCCTCCTCCTCCGATCGATCCAGCCCCCGCCCCTCCCCGCCCCTCGCCGCGCGCGCGAAGGAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGAGATCGCCTCGCCGCCGCGGCGTGGGATCCGGAGGTGGTGTAGCGAGGATGTCGTCTGATTCGTCGTCGTGGGCGCGCGCGCTCGTGCAGATCTCGCCCTACACCTTCTCCGCCATCGGCATAGCCGTCTCCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTTCATCACGGGGAGCAGCCTCATCGGGGCCGCCATCAAGGCCCCCAGGATCACCTCCAAGAACCTCATCAGTGTCATCTTCTGTGAGGCTGTTGCAATTTATGGTGTTATCGTGGCAATCATCCTCCAAACTAAGCTTGAAAGTGTACCAACTGCTCTAGTGCATCATCCAGAGTCTCTCCGGGCTGGCTATGCAATCTTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTG-CGGGGTTTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCACTCTTT--GTAAAGATCTTGGTGATTGAGATCTTCGGCAGCG-CCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCCTGCAAAAGCCTAGTTCTATTCATATGGCAATCTGTAAATTATTTCGGGGAGACCTATCAGAAGAA-TATCTGGTCCAGTTGTTTTTATT-TC-TTTTTTTTTGTTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTGA-TGCATCTGACGGTAGAGATACTGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCAGAGTGTGGTCTGCGTATTGAATAAAACCATTGAACTCAGGAATAAAATACTTCAAACAAAAAA] [+] EMBL AK059810 [TGTGACGACGTCTCGTCTCGTCTCCCTCTCCCGACCCGACACCCGAGTCTTCTTCCCTTCCCCAATCTCGCCCTTCCTCCTCCTCCGATCGATCCAGCCCCCGCCCCTCCCCGCCCCTCGCCGCGCGCGCGAAGGAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGAGATCGCCTCGCCGCCGCGGCGTGGGATCCGGAGGTGGTGTAGCGAGGATGTCGTCTGATTCGTCGTCGTGGGCGCGCGCGCTCGTGCAGATCTCGCCCTACACCTTCTCCGCCATCGGCATAGCCGTCTCCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTTCATCACGGGGAGCAGCCTCATCGGGGCCGCCATCAAGGCCCCCAGGATCACCTCCAAGAACCTCATCAGTGTCATCTTCTGTGAGGCTGTTGCAATTTATGGTGTTATCGTGGCAATCATCCTCCAAACTAAGCTTGAAAGTGTACCAACTGCTCTAGTGCATCATCCAGAGTCTCTCCGGGCTGGTTATGCAATCTTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTG CGGGGTTTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCACTCTTT GTAAAGATCTTGGTGATTGAGATCTTCGGCAGCG CCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCCTGCAAAAGCCTAGTTCTATTCATATGGCAATCTGTAAATTATTTCGGGGAGACCTATCAGAAGAA TATCTGGTCCAGTTGTTTTTATT TC TTTTTTTTTGTTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTGA TGCATCTGACGGTAGAGATACTGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCAGAGTGTGGTCTGCGTATTGAATAAAACCATTGAACTCAGGAATAAAATACTTCAAACAA ] [+] EMBL AK104951 [TGTGACGACGTCTCGTCTCGTCTCCCTCTCCCGACCCGACACCCGAGTCTTCTTCCCTTCCCCAATCTCGCCCTTCCTCCTCCTCCGATCGATCCAGCCCCCGCCCCTCCCCGCCCCTCGCCGCGCGCGCGAAGGAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGAGATCGCCTCGCCGCCGCGGCGTGGGATCCGGAGGTGGTGTAGCGAGGATGTCGTCTGATTCGTCGTCGTGGGCGCGCGCGCTCGTGCAGATCTCGCCCTACACCTTCTCCGCCATCGGCATAGCCGTCTCCATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTTCATCACGGGGAGCAGCCTCATCGGGGCCGCCATCAAGGCCCCCAGGATCACCTCCAAGAACCTCATCAGTGTCATCTTCTGTGAGGCTGTTGCAATTTATGGTGTTATCGTGGCAATCATCCTCCAAACTAAGCTTGAAAGTGTACCAACTGCTCTAGTGCATCATCCAGAGTCTCTCCGGGCTGGCTATGCAATCTTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTG CGGGGTTTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCACTCTTT GTAAAGATCTTGGTGATTGAGATCTTCGGCAGCG CCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCCTGCAAAAGCCTAGTTCTATTCATATGGCAATCTGTAAATTATTTCGGGGAGACCTATCAGAAGAA TATCTGGTCCAGTTGTTTTTATT TC TTTTTTTTTGTTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTGA TGCATCTGACGGTAGAGATACTGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCAGAGTGTGGTCTGCGTATTGAATAAAACCATTGA ] [+] EMBL BQ906491 [ GGGCTGGCTATGCCATCTTTGCGTCTGGTCTTATTGTTGGCTTTGCTAATCTTGTTTGCCGGGGTTTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAATTCATCACTCTTT GTAAAGATCTTGGTGATTGAGATCTTCGGCAGCGCCCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCCTGCAAAAGCCTAGTTCTATTCATATGGCNATCTGTAAATTATTTCGGGGAGACCTATCAGAAGAA TATCTGGTCCAGTTGTTTTTATT TCTTTTTTTTTTGTTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTGACCGCATCTGACGGTAGAGATACTGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCAGAGTGTGGTCTGCGTATTGAATAAAACCATTGAACTCAGGAATAAAATACTTCAAAAAAAAAA] [-] EMBL OSA312767 [ AGCAGCTTGGCATTGTCTGATGCTCAGAATTCATCACTCTTTAAGTAAAGATCTTGGTGATTGAGATCTTCGGCAGCG CCTTGGGTCTGTTTGGAGTGATTGTGGGCATAATCATGTCATCTCAAGCAACATGGCGTGCAAAAGCCTAGTTCTATTCATATGGCAATCTGTAAATTATTTCGGGGGGACCTATCAGAAGAAGTATCTGGTCCAGTTGTTTTTATTCTT TTTTTTTTTGTTTGTGCATTTTTGGCAAATCACGTATATTGATGCTTCA TGCATCTGACGGTAGAGATACTGTTCCTACTGTAAAGACTACATAACTGCTGCGTATCTTGTAGGTGCTATTGCTTTTGCAGAGTGTGGTCTGCGTATTGAAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||