cluster # 6588

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Oryza sativa
cluster # 6588 cluster # 6588 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6588#0 length = 2373 sequences # 4
consensusID : consensus_6588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2373
fasta sequence
                              [TTTGCCGCACTAGCAGCAGTAGCTACTACTACCAAGCAAGCGTAGACGACAGCAGCAGCAGCAGCAGCCTGCGCCGCGATCCCACCCACCCGGACGAGGAGGAGGAGGATTTTTTCCCCCTCTCTCCCCTTCGCTTTCCTGGAGCTTGAAGGATAGGGATCGAGGAGGAAGAAGACGAATCAAGAAGCAAGCAAGTACTGTGTTGCAGCAAGAAGAGGATAGCAATGGCAAAAGAGAACTTAGAGAGAGAGAGAGACAGAGACAGAGGAGATAGTATGAGCAAAAGCAGTTCTCAACTCTGAACATTGATAGCTTCATCTTCATAGCTTGATAGAATTATATCCGAGCTTGCAGGCATGTACAAGAACCAGCTTCAGGAGCTTGCTCAGAGGAGCTGCTTCAATCTGCCATCCTATGCGTGCATCCGCGAGGGTCCAGATCACGCGCCACGGTTTAAGGCCACGGTTAATTTCAATGGAGAAACGTTCGAAAGCCCCGCCTTCTGTTCTACTCTGCGGCTGGCAGAGCATGCGGCGGCAGAGGTTGCGCTCAATGAGCTGTCGAAGAGAGGGCCATCATCGTCACTTGCTGCAAAAGTTCTGGATGAAACTGGGATCTACAAGAACTTGCTTCAAGAAACAGCTCATCGAGCAGGTTTAAAACTGCCAGTGTACACTACAATTCGATCTGGGCCAGGTCATACACCTGTGTTCACATGCACAGTGGAGTTGGCAGGGATGACCTTTTACTGGCAATCCCGGCAAGACCAAGAAACAAGCACAGAAAAATGCTGCTATGGCAGCCTGGTCTGAATTGAAGCAATTGCCCCGAGTAGGTGAGCCATCATCCTCATCTTGTCCACCAGATCATGACGATGATGATCAGGAACAGATTATAGTGGCTCGTACTCTTGCAAGCTTGAATCAGACAAATGGAGGAAAGACACCACAGCAAAAGGAAAAACAGCAAAGCAGTAACCGCCCGTCATCTCGGAGACCCTCTTATCCGAAATCAAATGCATCATTTTATGGCCGGTTGCATTTACAAAAGCATGCATACCCAAGTGTTCCACCAGAGCAAGCAATGTACCATATGTGGCATCAGGTGCAAGCAACACAGCAGAAGCCGCATTTTCCAATGGTACCCACTATGGGCAGTACAGGCTTTCCACCGCCTCCAACTGTGCTCCACATGTACCCTCCACCTAGAGGGCAATTCACCATGCCATCCAGCCAAGATGGTTTAGGTCTTATTCCATGTTATCCTGAAGCTTCCCCCGTCCTTCCACGGTACTTCTCGCCTTATCCTGCCTCCTTTGTACCAAGACGTCCATTGCCAGTTAATGTTCACAAAATTCATGAGAAAAGGTTAGTGGGTGCTGATATGGTTGAGCTTCCTGATGCTGCGGTCTTCTCCCGATACACTGCTCCAGATTTCTCTGGTACATCAGAAAATGCTGTTCAAGATAACAAGAAAGAAGAATATACCGAGAGCAGTCCTGCCTCCGAGCAAGAAAGCAAATCTCATACTGCCTCAAGCTCCGCCACGCGTTCACCATCACAACAGCTAGAATCAAATCAAGATATAGAAATCATGGGCGGTTTGCGGTTGGAATCAAAGAAGCCCGCAGAACAGCCACCGGAGTCATCACCATCCAGGGTCAATCCTGTTCTTCTGTGTGAAACTGGCCAACGGCACCATTACAGTTTTGTTCGCCATGGTGATCCTGTCCACAGAAATAGTCCTCAAATAAGTGTGGCTACATCACCTAGTCCTATTCGTCGTGGTGATCCTGCCCACATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCTCCCCGTGCACAAGCTCCA-CCAAGATTTGGAACA-AGAATGCCGGTAAATTTGCCGAGTTCGTTATACCAGCAACGGCCTCCTTGG-TTAGCTGCCTCAGTTACAATCAGAACAACTGTCCCTGTATGCTCAGCGAGGCCAAATGTGGTGAACTCTAGTGCTGGAGCA-GCTCAACCTGCTGTTCAGATCCTCTCGGCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCTGCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTCACAG-TTTTGGTTCATCTGAGCTTTAGTCAGGGCTGAGAACTTAACTCTCAGCTGCATCTCAGTTTTGATTGTTTCT-TTT-CCTTTCATTTTTTTTATCT-CCTTGGGTATTTAGCTAGATAGACATAACTATATGAAGAGTTGGAGA-GCGGGCATCTCTCGCGATATCTGAACCTGTTGGATTTTTTATGTACCACACCTTATCAAGAAGAGTGAATGGGAACAGTATATA]

[+] EMBL AK110983             [TTTGCCGCACTAGCAGCAGTAGCTACTACTACCAAGCAAGCGTAGACGACAGCAGCAGCAGCAGCAGCCTGCGCCGCGATCCCACCCACCCGGACGAGGAGGAGGAGGATTTTTTCCCCCTCTCTCCCCTTCGCTTTCCTGGAGCTTGAAGGATAGGGATCGAGGAGGAAGAAGACGAATCAAGAAGCAAGCAAGTACTGTGTTGCAGCAAGAAGAGGATAGCAATGGCAAAAGAGAACTTAGAGAGAGAGAGAGACAGAGACAGAGGAGATAGTATGAGCAAAAGCAGTTCTCAACTCTGAACATTGATAGCTTCATCTTCATAGCTTGATAGAATTATATCCGAGCTTGCAGGCATGTACAAGAACCAGCTTCAGGAGCTTGCTCAGAGGAGCTGCTTCAATCTGCCATCCTATGCGTGCATCCGCGAGGGTCCAGATCACGCGCCACGGTTTAAGGCCACGGTTAATTTCAATGGAGAAACGTTCGAAAGCCCCGCCTTCTGTTCTACTCTGCGGCTGGCAGAGCATGCGGCGGCAGAGGTTGCGCTCAATGAGCTGTCGAAGAGAGGGCCATCATCGTCACTTGCTGCAAAAGTTCTGGATGAAACTGGGATCTACAAGAACTTGCTTCAAGAAACAGCTCATCGAGCAGGTTTAAAACTGCCAGTGTACACTACAATTCGATCTGGGCCAGGTCATACACCTGTGTTCACATGCACAGTGGAGTTGGCAGGGATGACCTTTTACTGGCAATCCCGGCAAGACCAAGAAACAAGCACAGAAAAATGCTGCTATGGCAGCCTGGTCTGAATTGAAGCAATTGCCCCGAGTAGGTGAGCCATCATCCTCATCTTGTCCACCAGATCATGACGATGATGATCAGGAACAGATTATAGTGGCTCGTACTCTTGCAAGCTTGAATCAGACAAATGGAGGAAAGACACCACAGCAAAAGGAAAAACAGCAAAGCAGTAACCGCCCGTCATCTCGGAGACCCTCTTATCCGAAATCAAATGCATCATTTTATGGCCGGTTGCATTTACAAAAGCATGCATACCCAAGTGTTCCACCAGAGCAAGCAATGTACCATATGTGGCATCAGGTGCAAGCAACACAGCAGAAGCCGCATTTTCCAATGGTACCCACTATGGGCAGTACAGGCTTTCCACCGCCTCCAACTGTGCTCCACATGTACCCTCCACCTAGAGGGCAATTCACCATGCCATCCAGCCAAGATGGTTTAGGTCTTATTCCATGTTATCCTGAAGCTTCCCCCGTCCTTCCACGGTACTTCTCGCCTTATCCTGCCTCCTTTGTACCAAGACGTCCATTGCCAGTTAATGTTCACAAAATTCATGAGAAAAGGTTAGTGGGTGCTGATATGGTTGAGCTTCCTGATGCTGCGGTCTTCTCCCGATACACTGCTCCAGATTTCTCTGGTACATCAGAAAATGCTGTTCAAGATAACAAGAAAGAAGAATATACCGAGAGCAGTCCTGCCTCCGAGCAAGAAAGCAAATCTCATACTGCCTCAAGCTCCGCCACGCGTTCACCATCACAACAGCTAGAATCAAATCAAGATATAGAAATCATGGGCGGTTTGCGGTTGGAATCAAAGAAGCCCGCAGAACAGCCACCGGAGTCATCACCATCCAGGGTCAATCCTGTTCTTCTGTGTGAAACTGGCCAACGGCACCATTACAGTTTTGTTCGCCATGGTGATCCTGTCCACAGAAATAGTCCTCAAATAAGTGTGGCTACATCACCTAGTCCTATTCGTCGTGGTGATCCTGCCCACATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCTCCCCGTGCACAAGCTCCA CCAAGATTTGGAACA AGAATGCCGGTAAATTTGCCGAGTTCGTTATACCAGCAACGGCCTCCTTGG TTAGCTGCCTCAGTTACAATCAGAACAACTATCCCTGTATGCTCAGCGAGGCCAAATGTGGTGAACTCTAGTGCTGGAGCA GCTCAACCTGCTGTTCAGATCCTCTCGGCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCTGCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTCACAG TTTTGGTTCATCTGAGCTTTAGTCAGGGCTGAGAACTTAACTCTCAGCTGCATCTCAGTTTTGATTGTTTCT TTT CCTTTCATTTTTTTTATCT CCTTGGGTATTTAGCTAGATAGACATAACTATATGAAGAGTTGGAGA GCGGGCATCTCTCGCGATATCTGAACCTGTTGGATTTTTTATGTACCACACCTTATCAAGAAGAGTGAATGGGAACAGTATATA]
[+] EMBL CA753248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGGTTTGCGGTTGGAATCAAAGAAGCCCGCAGAACAGCCACCGGAGTCATCACCATCCAGGGTCAATCCTGTTCTTCTGTGTGAAACTGGCCAACGGCACCATTACAGTTCTGTTCGCCATGGTGATCCTGTCCACAGAAATAGTCCTCAAATAAGTGTGGCTACATCACCTAGTCCTATTCGTCGTGGTGATCCTGCCCACATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCTCCCCGTGCACAAGCTCCA CCAAGATTTGGAACA AGAATGCCGGTAAATTTGCCGAGTTCGTTATACCAGCAACGGCCTCCTTGG TTAGCTGCCTCAGTTACAATCAGAACAACTGTCCCTGTATGCTCAGCGAGGCCAAATGTGGTGAACTCTAGTGCTGGAGCA GCTCAACCTGCTGTTCAGATCCTCTCGGCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCTGCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTTACAG TTTTGG TCATCTGAGCTTTAGT AGGGCTGAGAAC TAACTCTCA CTGCATCTCAG TTGGATTGGTTCT TT   CTTCC  TTTTGTAATCT C  TGGGTA TGAACCAGAT NACCT ACTATATG AGAG TGGA A  C GGCATCc                                                                          ]
[+] EMBL BQ906330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAAATAAGTGTGGCTACATCACCTAGTCCTATTCGTCGTGGTGATCCTGCCCACATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCTCCCAGTGCACAAGCTCCACCCAAGATTTGGAACANAGAATGCCGGTAAATTTGCCGAGTTCGTTATACCAGCAACGGCCTCCTTGGCTTAGCTGCCTCAGTTACAATCAGAACAACTGTCCCTGTATGCTCAGCGAGGCCAAATGTGGTGAACTCTAGTGCTGGAGCACGCTCAACCTGCTGTTCAGATCCTCTCGGCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCTGCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTCACAGCTTTTGGTTCATCTGAGCTTTAGTCAGGGCTGAGAACTTAACTCTCAGCTGCATCTCAGTTTTGATTGTTTCTCTTTCCCTTTCATTTTTTTTATCTCCCTTGGGTATTTAGCTAGATAGACATAACTATATGAAGAGTTGGAGA CCGGGCATCTCTCGCGATATCTGAAaaaaaaaa                                                   ]
[-] EMBL CA305693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCCTGCCCACATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCCCCCAGTGCACAAGCTCCA CCAAGATTTGGAACA AGAATGCCGGTAAATTTGCCGAGTTNGTTATACCAGCAACGGCCTCCTTGG TTAGCTGCCTCAGTTACAATCAGAACAACTGTCCCTGTATGCTCAGCGAGGCCAAATGTGGTGAACTCTAGTGCTGGAGCA GCTCAACCTGCTGTTCAGATCCTCTCGGCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCTGCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTCACAG TTTTGGTTCATCTGAGCTTTAGTCAGGGCTGAGAACTTAACTCTCAGCTGCATCTCAGTTTTGATTGTTTCT TTT CCTTTCATTTTTTTTATCT CCTTGGGTATTTAGCTAGATAGACATAACTATATGAAGAGTTGGAGACGCGGGCATCTCTCGCGATATCTGAACCTGTTGGAT                                                 ]




>consensus_6588#0
TTTGCCGCACTAGCAGCAGTAGCTACTACTACCAAGCAAGCGTAGACGACAGCAGCAGCA
GCAGCAGCCTGCGCCGCGATCCCACCCACCCGGACGAGGAGGAGGAGGATTTTTTCCCCC
TCTCTCCCCTTCGCTTTCCTGGAGCTTGAAGGATAGGGATCGAGGAGGAAGAAGACGAAT
CAAGAAGCAAGCAAGTACTGTGTTGCAGCAAGAAGAGGATAGCAATGGCAAAAGAGAACT
TAGAGAGAGAGAGAGACAGAGACAGAGGAGATAGTATGAGCAAAAGCAGTTCTCAACTCT
GAACATTGATAGCTTCATCTTCATAGCTTGATAGAATTATATCCGAGCTTGCAGGCATGT
ACAAGAACCAGCTTCAGGAGCTTGCTCAGAGGAGCTGCTTCAATCTGCCATCCTATGCGT
GCATCCGCGAGGGTCCAGATCACGCGCCACGGTTTAAGGCCACGGTTAATTTCAATGGAG
AAACGTTCGAAAGCCCCGCCTTCTGTTCTACTCTGCGGCTGGCAGAGCATGCGGCGGCAG
AGGTTGCGCTCAATGAGCTGTCGAAGAGAGGGCCATCATCGTCACTTGCTGCAAAAGTTC
TGGATGAAACTGGGATCTACAAGAACTTGCTTCAAGAAACAGCTCATCGAGCAGGTTTAA
AACTGCCAGTGTACACTACAATTCGATCTGGGCCAGGTCATACACCTGTGTTCACATGCA
CAGTGGAGTTGGCAGGGATGACCTTTTACTGGCAATCCCGGCAAGACCAAGAAACAAGCA
CAGAAAAATGCTGCTATGGCAGCCTGGTCTGAATTGAAGCAATTGCCCCGAGTAGGTGAG
CCATCATCCTCATCTTGTCCACCAGATCATGACGATGATGATCAGGAACAGATTATAGTG
GCTCGTACTCTTGCAAGCTTGAATCAGACAAATGGAGGAAAGACACCACAGCAAAAGGAA
AAACAGCAAAGCAGTAACCGCCCGTCATCTCGGAGACCCTCTTATCCGAAATCAAATGCA
TCATTTTATGGCCGGTTGCATTTACAAAAGCATGCATACCCAAGTGTTCCACCAGAGCAA
GCAATGTACCATATGTGGCATCAGGTGCAAGCAACACAGCAGAAGCCGCATTTTCCAATG
GTACCCACTATGGGCAGTACAGGCTTTCCACCGCCTCCAACTGTGCTCCACATGTACCCT
CCACCTAGAGGGCAATTCACCATGCCATCCAGCCAAGATGGTTTAGGTCTTATTCCATGT
TATCCTGAAGCTTCCCCCGTCCTTCCACGGTACTTCTCGCCTTATCCTGCCTCCTTTGTA
CCAAGACGTCCATTGCCAGTTAATGTTCACAAAATTCATGAGAAAAGGTTAGTGGGTGCT
GATATGGTTGAGCTTCCTGATGCTGCGGTCTTCTCCCGATACACTGCTCCAGATTTCTCT
GGTACATCAGAAAATGCTGTTCAAGATAACAAGAAAGAAGAATATACCGAGAGCAGTCCT
GCCTCCGAGCAAGAAAGCAAATCTCATACTGCCTCAAGCTCCGCCACGCGTTCACCATCA
CAACAGCTAGAATCAAATCAAGATATAGAAATCATGGGCGGTTTGCGGTTGGAATCAAAG
AAGCCCGCAGAACAGCCACCGGAGTCATCACCATCCAGGGTCAATCCTGTTCTTCTGTGT
GAAACTGGCCAACGGCACCATTACAGTTTTGTTCGCCATGGTGATCCTGTCCACAGAAAT
AGTCCTCAAATAAGTGTGGCTACATCACCTAGTCCTATTCGTCGTGGTGATCCTGCCCAC
ATAAACATTCCTCAAATAAGTGTGGCCACACCACCTGAGTGCCGGTCTCCCCGTGCACAA
GCTCCACCAAGATTTGGAACAAGAATGCCGGTAAATTTGCCGAGTTCGTTATACCAGCAA
CGGCCTCCTTGGTTAGCTGCCTCAGTTACAATCAGAACAACTGTCCCTGTATGCTCAGCG
AGGCCAAATGTGGTGAACTCTAGTGCTGGAGCAGCTCAACCTGCTGTTCAGATCCTCTCG
GCCTCGCCTAGAAAAGAAGAACCTGAAGCTCGCACGAACACCAGTGACACAAGCAATGCT
GCAACGGCGAGTTCTGAGCTCAATAAGCTCCATATTTGAAAGTCACAGTTTTGGTTCATC
TGAGCTTTAGTCAGGGCTGAGAACTTAACTCTCAGCTGCATCTCAGTTTTGATTGTTTCT
TTTCCTTTCATTTTTTTTATCTCCTTGGGTATTTAGCTAGATAGACATAACTATATGAAG
AGTTGGAGAGCGGGCATCTCTCGCGATATCTGAACCTGTTGGATTTTTTATGTACCACAC
CTTATCAAGAAGAGTGAATGGGAACAGTATATA
clustalw multiple alignements is not computed in this case