cluster # 6590

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Oryza sativa
cluster # 6590 cluster # 6590 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6590#0 length = 1392 sequences # 4
consensusID : consensus_6590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1392
fasta sequence
                              [CAGCCAAAAAAACCTGTTCATCATCAGCTCGAGTGTTCAACGACCTTTGCCCTCCATCCCAAAATCTCACCGGCACCAGCAAAGGCAGCCATGGATCCAGCCACCACCGAGCTGCGGTTCGACACGCCGCTCCTCCGCATCTACAACGACGGCCGCGTGGAGCGCCTCTTCGGCACGGAAACCACACCGGCGGGCTTCGACGGCGCCACCGGGGTCACCTCCAAGGACGTCGTCATCGACGACGCCACCGGCGTCTCTGCCCGCCTCTACATCCCCGACCTCCCCGCCTCCGGCCCCGGTCATCACCGCAAGAAGCTACCCATCGTCGTCTACTTCCACGGCGGCGGCATGGTCCTCGACTCGGCCGCCTCCCCGACGTACCACAGGTACCTCAACTCCCTCGTCTCCAAGGCCGGCGCCCTCGCCGTGTCCGTCAACTACCGGCTTGCCCCGGAGCACCCGCTTCCGGCGGCGTACGACGACGCCTGGGCCGCACTCAGCTGGACCGCGTCAGCTGCCGACCCATGGCTGTCGGAGCACGGTGACGTCGGCCGTGTCTTCTTGGCCGGTGACAGCGGCGGCGCCAACGTCGTCCACAACGTAGCAATCATGGCCGGCGCCGGCCAATCTAGCCTACCCCCAGGAGCAACAGTGGAAGGTGTGATCATACTGCATCCCATGTTTTCCGGCAAGGAGCCGATCGACGGCGAGAACGCGGAGACGAGGGAGCTGACGGAGAAGCTCTGGCCCCTGATATGTGCAGACGCAGAGGCTGGGCTCGATGACCCGAGGCTGAACCCCATGGCAGAAGGAGCTCCGAGCTTGCAGAAGCTGGGATGCCGGAAGCTGCTCGTCTGCTCGGCCGAGAGCGACATTGTGCTGGCGAGGGCGGCGGCGTACTACCAGGCAGTGATGGCGAGCGGGTGGCCCGGCATGGCTGAGTGGCTGGAGTCCAAGGGAGAGGAGCACGTGTTCTTCCTCAACAAGCCGGATTGCGAGGAGTCTGTGGCGCTCATGGACAGGGTAGTCGCCTTCCTCGCGGGTAATTGATGAAAGGGATCGGATGAAATCAAAACTGTTCTTGCTTATCGCAAGCACATAAATTTGATCGTGAATAATGGGAGATTGGGGGGAGAAAGGGATGGGATTTTCCTCTTGTTCTCTGCAACCACTAGTTCAAGAAAGATGCGCTAAATCGGATCAAGTTCAGGCTTTGTTAGCTGTGGTTGTTAAGCTCTAAGATGAAATTCATGAGGTGTTTAATAGAAGGTGAAACTGAAAGCGTGTACTGGGTATGATGATTTATTGTGAGGTAAGTTCAGTGTGAAATATGGAACATGATTTAACTGTATTCGCTATTCTTGAATAAATCATGCTCAGTAAACAAAAAAA]

[+] EMBL CB685226             [CAGCCAAAAAAACCTGTTCATCATCAGCTCGAGTGTTCAACGACCTTTGCCCTCCATCCCAAAATCTCACCGGCACCAGCAAAGGCAGCCATGGATCCAGCCACCACCGAGCTGCGGTTCGACACGCCGCTCCTCCGCATCTACAACGACGGCCGCGTGGAGCGCCTCTTCGGCACGGAAACCACACCGGCGGGCTTCGACGGCGCCACCGGGGTCACCTCCAAGGACGTCGTCATCGACGACGCCACCGGCGTCTCTGCCCGCCTCTACATCCCCGACCTCCCCGCCTCCGGCCCCGGTCATCACCGCAAGAAGCTACCCATCGTCGTCTACTTCCACGGCGGCGGCATGGTCCTCGACTCGGCCGCCTCCCCGACGTACCACAGGTACCTCAACTCCCTCGTCTCCAAGGCCGGCGCCCTCGCCGTGTCCGTCAACTACCGGCTTGCCCCGGAGCACCCGCTTCCGGCGGCGTACGACGACGCCTGGGCCGCACTCAGCTGGACCGCGTCAGCTGCCGACCCATGGCTGTCGGAGCACGGTGACGTCGGCCGTGTCTTCTTGGCCGGTGACAGCGGCGGCGCCAACGTCGTCCACAACGTAGCAATCATGGCCGGCGCCGGCCAATCTAGCCTACCCCCAGGAGCAACAGTGGAAGGTGTGATCATACTGCATCCCATGTTTTCCGGCAAGGAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK066139             [         AAACCTGTTCATCATCAGCTCGAGTGTTCAACGACCTTTGCCCTCCATCCCAAAATCTCACCGGCACCAGCAAAGGCAGCCATGGATCCAGCCACCACCGAGCTGCGGTTCGACACGCCGCTCCTCCGCATCTACAACGACGGCCGCGTGGAGCGCCTCTTCGGCACGGAAACCACACCGGCGGGCTTCGACGGCGCCACCGGGGTCACCTCCAAGGACGTCGTCATCGACGACGCCACCGGCGTCTCTGCCCGCCTCTACATCCCCGACCTCCCCGCCTCCGGCCCCGGTCATCACCGCAAGAAGCTACCCATCGTCGTCTACTTCCACGGCGGCGGCATGGTCCTCGACTCGGCCGCCTCCCCGACGTACCACAGGTACCTCAACTCCCTCGTCTCCAAGGCCGGCGCCCTCGCCGTGTCCGTCAACTACCGGCTTGCCCCGGAGCACCCGCTTCCGGCGGCGTACGACGACGCCTGGGCCGCACTCAGCTGGACCGCGTCAGCTGCCGACCCATGGCTGTCGGAGCACGGTGACGTCGGCCGTGTCTTCTTGGCCGGTGACAGCGGCGGCGCCAACGTCGTCCACAACGTAGCAATCATGGCCGGCGCCGGCCAATCTAGCCTACCCCCAGGAGCAACAGTGGAAGGTGTGATCATACTGCATCCCATGTTTTCCGGCGAGGAGCCGATCGACGGCGAGAACGCGGAGACGAGGGAGCTGACGGAGAAGCTCTGGCCCCTGATATGTGCAGACGCAGAGGCTGGGCTCGATGACCCGAGGCTGAACCCCATGGCAGAAGGAGCTCCGAGCTTGCAGAAGCTGGGATGCCGGAAGCTGCTCGTCTGCTCGGCCGAGAGCGACATTGTGCTGGCGAGGGCGGCGGCGTACTACCAGGCAGTGATGGCGAGCGGGTGGCCCGGCATGGCTGAGTGGCTGGAGTCCAAGGGAGAGGAGCACGTGTTCTTCCTCAACAAGCCGGATTGCGAGGAGTCTGTGGCGCTCATGGACAGGGTAGTCGCCTTCCTCGCGGGTAATTGATGAAAGGGATCGGATGAAATCAAAACTGTTCTTGCTTATCGCAAGCACATAAATTTGATCGTGAATAATGGGAGATTGGGGGGAGAAAGGGATGGGATTTTCCTCTTGTTCTCTGCAACCACTAGTTCAAGAAAGATGCGCTAAATCGGATCAAGTTCAGGCTTTGTTAGCTGTGGTTGTTAAGCTCTAAGATGAAATTCATGAGGTGTTTAATAGAAGGTGAAACTGAAAGCGTGTACTGGGTATGATGATTT                                                                                        ]
[+] EMBL CK085319             [                            TCGAGTGTTCAACGACCTTTGCCCTCCATCCCAAAATCTCACCGGCACCAGCAAAGGCAGCCATGGATCCAGCCACCACCGAGCTGCGGTTCGACACGCCGCTCCTCCGCATCTACAACGACGGCCGCGTGGAGCGCCTCTTCGGCACGGAAACCACACCGGCGGGCTTCGACGGCGCCACCGGGGTCACCTCCAAGGACGTCGTCATCGACGACGCCACCGGCGTCTCTGCCCGCCTCTACATCCCCGACCTCCCCGCCTCCGGCCCCGGTCATCACCGCAAGAAGCTACCCATCGTCGTCTACTTCCACGGCGGCGGCATGGTCCTCGACTCGGCCGCCTCCCCGACGTACCACAGGTACCTCAACTCCCTCGTCTCCAAGGCCGGCGCCCTCGCCGTGTCCGTCAACTACCGGCTTGCCCCGGAGCACCCGCTTCCGGCGGCGTACGACGACGCCTGGGCCGCACTCAGCTGGACCGCGTCAGCTGCCGACCCATGGCTGTCGGAGCACGGTGACGTCGGCCGTGTCTTCTTGGCCGGTGACAGCGGCGGCGCCAACGTCGTCCACAACGTAGCAATCATGGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA762538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            caGAGGACGAG ACAAGGGGACGAGGGAGCTGACGGAGAAGCTCTGGCCCNTGATATGTGCAGACCCAGAGGCTGGGCTCGATGACCCGAGGCTGAACCCCATGGCAGAAGGAGCTCCGAGCTTGCAGAAGCTGGGATGCCGGAAGCTGCTTGTCTGCTCGGCCGAGAGCGACATTGGGCTGGCGAGGGGGGCGGCGTACTACCAGGCAGTGATGGCGAGCGGGTGGCCCGGCATGGCTGAGTGGCTGGAGTCCAAGGGAGAGGAGCACGTGTTCTTCCTCAACAAGCCGGATTGCGAGGAGTCTGTGGCGCTCATGGACAGGGTAGTCGCCTTCCTCGCTGGTAATTGATGAAAGGGATCGGATGAAATCAAAACTGTTCTTGCTTATCGCAAGCACATAAATTTGATCGTGAATAATGTGAGATTGGGGGGAGAAAGGGATGGGATTTTCCTCTTGTTCTCTGCAACCACTAGTTCAAGAATGATGCGCTAAATCGGATCAAGTTCAGGCTTTGTTAGCTGTGGTTGTTAAGCTCTAAGATGAAATTCATGAGGTGTTCAATAGAAGGTGAAACTGAAAGCGTGTACTGGGTATGATGATCTATTGTGAGGTAAGTTCAGTGTGAAATATGGAACATGATTTAACTGTATTCGCTATTCTTGAATAAATCATGCTCAGTAAACAAAAAAA]




>consensus_6590#0
CAGCCAAAAAAACCTGTTCATCATCAGCTCGAGTGTTCAACGACCTTTGCCCTCCATCCC
AAAATCTCACCGGCACCAGCAAAGGCAGCCATGGATCCAGCCACCACCGAGCTGCGGTTC
GACACGCCGCTCCTCCGCATCTACAACGACGGCCGCGTGGAGCGCCTCTTCGGCACGGAA
ACCACACCGGCGGGCTTCGACGGCGCCACCGGGGTCACCTCCAAGGACGTCGTCATCGAC
GACGCCACCGGCGTCTCTGCCCGCCTCTACATCCCCGACCTCCCCGCCTCCGGCCCCGGT
CATCACCGCAAGAAGCTACCCATCGTCGTCTACTTCCACGGCGGCGGCATGGTCCTCGAC
TCGGCCGCCTCCCCGACGTACCACAGGTACCTCAACTCCCTCGTCTCCAAGGCCGGCGCC
CTCGCCGTGTCCGTCAACTACCGGCTTGCCCCGGAGCACCCGCTTCCGGCGGCGTACGAC
GACGCCTGGGCCGCACTCAGCTGGACCGCGTCAGCTGCCGACCCATGGCTGTCGGAGCAC
GGTGACGTCGGCCGTGTCTTCTTGGCCGGTGACAGCGGCGGCGCCAACGTCGTCCACAAC
GTAGCAATCATGGCCGGCGCCGGCCAATCTAGCCTACCCCCAGGAGCAACAGTGGAAGGT
GTGATCATACTGCATCCCATGTTTTCCGGCAAGGAGCCGATCGACGGCGAGAACGCGGAG
ACGAGGGAGCTGACGGAGAAGCTCTGGCCCCTGATATGTGCAGACGCAGAGGCTGGGCTC
GATGACCCGAGGCTGAACCCCATGGCAGAAGGAGCTCCGAGCTTGCAGAAGCTGGGATGC
CGGAAGCTGCTCGTCTGCTCGGCCGAGAGCGACATTGTGCTGGCGAGGGCGGCGGCGTAC
TACCAGGCAGTGATGGCGAGCGGGTGGCCCGGCATGGCTGAGTGGCTGGAGTCCAAGGGA
GAGGAGCACGTGTTCTTCCTCAACAAGCCGGATTGCGAGGAGTCTGTGGCGCTCATGGAC
AGGGTAGTCGCCTTCCTCGCGGGTAATTGATGAAAGGGATCGGATGAAATCAAAACTGTT
CTTGCTTATCGCAAGCACATAAATTTGATCGTGAATAATGGGAGATTGGGGGGAGAAAGG
GATGGGATTTTCCTCTTGTTCTCTGCAACCACTAGTTCAAGAAAGATGCGCTAAATCGGA
TCAAGTTCAGGCTTTGTTAGCTGTGGTTGTTAAGCTCTAAGATGAAATTCATGAGGTGTT
TAATAGAAGGTGAAACTGAAAGCGTGTACTGGGTATGATGATTTATTGTGAGGTAAGTTC
AGTGTGAAATATGGAACATGATTTAACTGTATTCGCTATTCTTGAATAAATCATGCTCAG
TAAACAAAAAAA
clustalw multiple alignements is not computed in this case