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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6592 cluster # 6592       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6592#0 length = 783 sequences # 4  

consensusID : consensus_6592#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 783
fasta sequence
                              [TCTTTTTTTTCATTAAATCATACATGTATTACCAATATTAACATATTACATAGTATATATGAATGTGTAAGCCACTCGAGTGAAGATTACTTGCTTTCAATCCTATATGATGCCTTGATATCATGCAATTTGGTAGCTATTTGTTTCATATTCATTCGCTCACTTGGTACTGGGTGCGTACAGAAGAGTCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCCGGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGTATTTGATGTGGAAGACTCGTCTCCACAAATTTGACAATGTCGAGTCCGTCTCCGAACATAGGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGCAGTATTACCCCAAAACTATAAACATCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATGTATCCTATAGTACCACCGATGGAACTAACTAAACCGGTCTTCTGCCCAGATTCAATACAAAGACGTGCAATGCCAAAATCTCCTATAAGAGCATTCATATCGTCGTCCAGAAGGATGTTGCTAGGCTTCAAATCACGATGAACAGTAGGCCTTCCACAGTCGTGGTGCAAATAGTCCAATGCATCAGCGATATTGACAGATACGCTTATTCTTTCAGTTAATCCTAGTTTTTTAGAAGTCCTCCCATCCGCTTTGCGATGTAGCCATGTGTCCAGATTCCCATTAGGCATGAATTCATAAACTAAAGCTTTGAAA]

[+] EMBL CB618015             [TCTTTTTTTTCATTAAATCATACATGTATTACCAATATTAACATATTACATAGTATATATGAATGTGTAAGCCACTCGAGTGAAGATTACTTGCTTTCAATCCTATATGATGCCTTGATATCATGCAATTTGGTAGCTATTTGTTTCATATTCATTCGCTCACTTGGTACTGGGTGCGTACAGAAGAGTCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCCGGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGTATTTGATGTGGAAGACTCGTCTCCACAAATTTGACAATGTCGAGTCCGTCTCCGAACATAGGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGCAGTATTACCCCAAAACTATAAACATCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATGTATCCTATAGTACCACCGATGGAACTAACTAAACCGGTCTTCTGCCCAGATTCAATACAAAGACGTGCAATGCCAAAATCTCCTATAAGAGCATTCATATCGTCGTCCAGAAGGATGTTGCTAGGCTTCAAATCACGATGAACAGTAGGCCTTCCACAGTCGTGGTGCAAATAGTCCAATGCATCAGCGATATTGACAGATACGCTTATTCTTTCAGTTAATCCTAGTTTTTTAGAAGTCCTCCCATCCGCTTTGCGATGTAGCCATGTGTCCAGATTCCCATTAGGCATGAATTCATAAACTAAAGCTTTGAA ]
[+] EMBL CB618013             [                   ATACATGTATTACCAATATTAACATATTACATAGTATATATGAATGTGTAAGCCACTCGAGTGAAGATTACTTGCTTTCAATCCTATATGATGCCTTGATATCATGCAATTTGGTAGCTATTTGTTTCATATTCATTCGCTCACTTGGTACTGGGTGCGTACAGAAGAGTCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCCGGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGTATTTGATGTGGAAGACTCGTCTCCACAAATTTGACAATGTCGAGTCCGTCTCCGAACATAGGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGCAGTATTACCCCAAAACTATAAACATCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATGTATCCTATAGTACCACCGATGGAACTAACTAAACCGGTCTTCTGCCCAGATTCAATACAAAGACGTGCAATGCCAAAATCTCCTATAAGAGCATTCATATCGTCGTCCAGAAGGATGTTGCTAGGCTTCAAATCACGATGAACAGTAGGCCTTCCACAGTCGTGGTGCAAATAGTCCAATGCATCAGCGATATTGACAGATACGCTTATTCTTTCAGTTAATCCTAGTTTTTTAGAAGTCCTCCCATCCGCTTTGCGATGTAGCCATGTGTCCAGATTCCCATTAGGCATGAATTCATAAACTAAAGCTTTGAAA]
[+] EMBL CB618054             [                                      TAACACTTTAAAGAGTATATATGAATGTGTAAGCCACTCGAGTGAAGATTACTTGCTTTCAATCCTATATGATGCCTTCATATCATGCAATTTGGTAGCTATTTGTTTCATATTCATTCGCTCACTTGGGACTGGGTGCGTACATAACAGTCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCCGGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGTATTTGATGTGGAAAACTCGTCTCCACAAATTTGACAATGTCTAGTCCGTCTCCGAACATAGGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGGAGTATTACCCCAAAACTATAAACATCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATGTATCCTATAGTACCACCGATGGAACTAACTAAACCGGTCTTCTGCCCATATTCAATACAAAGACGTGCAATGCCAAAATCTCCTATAAGAGCATTCATATCGTCGTCCAGAAGGATGTTGCTAGGCTTCAAATCACGATGAACAGTAGGCCTTCCACAGTCGTGGTGCAAATAGT                                                                                                                                            ]
[+] EMBL BQ548081             [                                                                                                                                                                                            TCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCCGGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGTATTTGATGTGGAAGACTCGTCTCCACAAATTTGACAATGTCGAGTCCGTCTCCGAACATAGGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGCAGTATTACCCCAAAACTATAAACATCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATG                                                                                                                                                                                                                                                                                                                           ]


>consensus_6592#0 TCTTTTTTTTCATTAAATCATACATGTATTACCAATATTAACATATTACATAGTATATAT GAATGTGTAAGCCACTCGAGTGAAGATTACTTGCTTTCAATCCTATATGATGCCTTGATA TCATGCAATTTGGTAGCTATTTGTTTCATATTCATTCGCTCACTTGGTACTGGGTGCGTA CAGAAGAGTCCTAATTGTAGCAGGGAGACCAAGCATTGGTGGATCATATTTTCTGATTCC GGTTTTGCTCTTGCAAATTCCTCGCTTTCATCAATAAGACACGCGTCAATGACATTAAGT ATTTGATGTGGAAGACTCGTCTCCACAAATTTGACAATGTCGAGTCCGTCTCCGAACATA GGGTCTGTTGGTCTTTTTCCTGTCAACATCTCCAGCAGTATTACCCCAAAACTATAAACA TCGCCGGATGTTGATGCATGGCCTCCTCCCGCATACTCTGGAGCGATGTATCCTATAGTA CCACCGATGGAACTAACTAAACCGGTCTTCTGCCCAGATTCAATACAAAGACGTGCAATG CCAAAATCTCCTATAAGAGCATTCATATCGTCGTCCAGAAGGATGTTGCTAGGCTTCAAA TCACGATGAACAGTAGGCCTTCCACAGTCGTGGTGCAAATAGTCCAATGCATCAGCGATA TTGACAGATACGCTTATTCTTTCAGTTAATCCTAGTTTTTTAGAAGTCCTCCCATCCGCT TTGCGATGTAGCCATGTGTCCAGATTCCCATTAGGCATGAATTCATAAACTAAAGCTTTG AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)