These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6633#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4126 fasta sequence [TTCCTCTCGCTCCCACCAAGACCAACCAAACCCCTGTTTCTCCCTCAAAACCTCCCTCTCTTTCCCCCCCGAATGCTCGAGCGCTGCGCGGCGGAATCCCCTACTCCCCTCCGATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAGATCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTCCTACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCCGTTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCTCCACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCCGCGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCCGCAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCCTGCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGACCGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGCCGCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGGGGAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCATGCCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTGGTTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGCCGCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCGCGAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAAAACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGTGCAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCATGGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAAAGAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATTACTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGACACGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGATGTTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATCATCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTCAACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGCTCCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTCATCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTTAGATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGTACTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAATAACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAATGGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGCAGAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGATCCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACAACCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGAGCGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAATGGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAGGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA-GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT-CGTGAAA-CCTGACAAGGATTCATCAAGAATGCAT-GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAG-TATGGATGTCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGATAGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAGTAGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAATAGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGAGAACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAACAGGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGAAAAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGCTAGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGCAATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACCTCCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTACAAAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAGGTAGTTTGTACATTCTACTTCACTAGTTTAGCACTGATCTCTCTATCTGACGGATTCTGTTGGCACCACAATCGGTGTGCTTTGTGTTAGTTTATATTAGTTTT] [+] EMBL AK068952 [TTCCTCTCGCTCCCACCAAGACCAACCAAACCCCTGTTTCTCCCTCAAAACCTCCCTCTCTTTCCCCCCCGAATGCTCGAGCGCTGCGCGGCGGAATCCCCTACTCCCCTCCGATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAGATCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTCCTACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCCGTTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCTCCACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCCGCGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCCGCAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCCTGCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGACCGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGCCGCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGGGGAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCATGCCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTGGTTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGCCGCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCGCGAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAAAACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGTGCAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCATGGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAAAGAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATTACTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGACACGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGATGTTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATCATCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTCAACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGCTCCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTCATCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTTAGATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGTACTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAATAACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAATGGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGCAGAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGATCCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACAACCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGAGCGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAATGGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAGGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAAGAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT CGTGAAA CCTGACAAGGATTCATCAAGAATGCAT GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAG TATGGATGTCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGATAGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAGTAGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAATAGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGAGAACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAACAGGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGAAAAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGCTAGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGCAATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACCTCCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTACAAAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAGGTAGTTTGTACATTCTACTTCACTAGTTTAGCACTGATCTCTCTATCTGACGGATTCTGTTGGCACCACAATCGGTGTGCTTTGTGTTAGTTTATATTAGTTTT] [+] EMBL BF475204 [ AGGTTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGCTCAAAAGGGGATGTTAAGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCACTGAACACAGGGGGTTCTACACCTATGACCAATAGTTTAGGTGCATCAATCCGTGAAACCCTGACAAGGATTCATCACAAATGGATGGTATTTggg ] [+] EMBL CA764500 [ TGATGTTAGTGGCACAGAGAACGATGTCGGATGTAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATCCAGTGAAGGAAAATAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTTGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAACACA GGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAAT CGTGAAA CCTGACAAGGATTCATCAAGAATGCAT GTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTGCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAAGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCATTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAAGCAATACCTATAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCAAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGGGCATTTGGCTGNGATTCTCCTAATGACTCGCCAGTAATGGTCAATACTTGCGAAAGGAAACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAGTTTTGGATGGCAAAACAGGTCCATCCATACTTGGCTCACAGAGTTG AAGCCAGGAAGCGGAANAAGCAGATAGAATCTGGTCTTATCANTTTGATGANAGGCNC AAGCTGAGCCAGTTGGG ] [-] EMBL BF475236 [ ACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAGTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTAACATGCCCATGGAAGGGCTACAACATGGCATTCAAGTGGCCATGGGCAGGGACTGAACATCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAGAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGACGCAGTAGGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||