These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6634#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1523 fasta sequence [AATAGGGGGGAAGAGAGATTTCCCTCGCGCGCTTNTCGTTCGCCTTCTTCCCCTTTGCGGATTTNAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGCGGCGGC-GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTG-TGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAA-TTTGAGCGAGAAG-TGAATGCAGCGGCA-TTGTCTAA-TAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTCAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGGGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTTTTACGGTAGCAATCCTGTTAATA] [+] EMBL OSS2955A [AATAGGGGGGAAGAGAGATTTCCCTCGCGCGCTTNTCGTTCGCCTTCTTCCCCTTTGCGGATTTNAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGC GTGGCNGGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGNGNNNGGAGGCGGATCCGNTCTTCCCCGCCGNCGAGTGCGTNCAGGACTCCGCCGACAGGA ] [+] EMBL AK071068 [ AGAGATTTCCCTCGCGCGCTTGTCGTTCGCCTTCTTCCCCTTTGCGGATTTGAATCCGCTCGGGGGCGCTATTACCTATTGGCGCCGCGGCGGCGGCGGC GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTG TGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAA TTTGAGCGAGAAG TGAATGCAGCGGCA TTGTCTAA TAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTCAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGGGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTTTTACGGTAGCAATCCTGTTAATA] [+] EMBL AU077594 [ GCGGC GCGGCG GGCGATTTGAGTCGGGATCCCGCTCGATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTGTTGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAATTTTGAGCGANAAGTTGAATGCAGCGGCATTTGTCTAANAAAGTCAAATTCNAGGG ] [+] EMBL AU174275 [ CACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGAGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGGCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTTTTCTCCAGAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||