These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2506 fasta sequence [TCTCTCCTCCATTTTTGTGAGTTTTTTTTTGTTGTTTTTTTTTTTTTGGTCTCGCGAAATCCAAAGACCCAAGAACAACCAAAAAGGCCAATCCTTTTCTCCTCCTCCTCCTCCATCTCCATCTCCTCTTCGAGTCCTCGTCGTCGTGGTGGTCGTCGGAGGTGGTATTCTTGATTTGATTCGAGGAGGCGGGGGGGGGGGGGGGAGATGAAATCGCCATTGCGGAAGTTCAGGGGATTCGGTCTCCACAGCCACAGGGAGAGGAAGGACCACCGCCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGAAATGGAGGAAATGAGGAATTGTTATGACAGCTTGCTTTCAGCTGCAGCTGCAACAATGAACAGTGTATATGAGTTTGCAGAAGCTATGGAGGAAATGGGAACTTGCTTACTTGAGAAAACTGCATTGAATTATGATGATGATGACAGTGGCAGAGTTCTGATGATGCTAGGAAAGGCCCAATTCGAACTGCAGAAGTTTGTTGATAACTATCGTACAAATATCATAAATACCATCACAAACCCATCAGAGTCACTTCTCAAAGAGCTACAAGTTGTAGAGGAAATGAAGGAACTCTGTGATCATAAAAGACAGGAATATGAAGCCATGCGAGCAGCCTATAGAGAGAAAGGACGGTCAAGGCATTCCAAAACCGAAACATTATCCTCGGAACAGCTGCAAGCTTATTTTCTTGACTATCAAGAGGATGCAGCATTGTTTATATTCCGATTGAAATCATTGAAGCAAGGTCAATTCCGTAGTATTTTAACACAGGCTGCTCGCCACCATTCTGCTCAGTTGAGTTTTTTCAGGCGAGGGTTGAAGTATCTAGAGGCTCTGGAACCTCATGTAAAAGCAGTTGCTGAGAAACAGCACATTGAATACCCTTTAAATGGACTAGATGACGACACAGATAATGATGAGTACAGCTCTTACCAGGGCAATCAAAGTGATGACAGTGAGTTAAGTTTTGACTATGAGATAAATGACAGGGATAAGGACTTCCCCGCTTCCAGAAGTTCAATGGATTTGGATCAGTCTAATCAGGCATGTTCCCCAGAACCTCTGAAGGAACACAAGCAGGAATATACCGAACAAATACAGGCAGATTTTGCAGCTCCTCGAGTGAAGCTTGAGATTGGTACCCAATCAGCGCCAATTTCTGCTGACAATGTGTTTGATCCATCTACAAGGTTTCGGAAAATGAATACGTCAAACAGAACAAATTATTCGTACAAACTCCCGACACCAGATGATGACAAGAACTCCACTTCAGCACACACCAATAGATCTCCTCATTCAGATCAACCAGAAAGTAAATCTCACGTAGCAGAAAATTTATGGCATTCCTCTCCACTGGTCAAAGGTTTTAAACCAAACTCCATGTTTAGTGGACCTGTTAAGATGCCATCAAGTACTGAAGGGATATCAGCGCCACTTGTTTATCCCTACGCTACTTCAGATTTTAAGAAAATGAAGAGGGAAGCATTTTCCGGTCCAATTCCAAGCAAAGCAGGATTGAACAAGCCCTTGTTTTCTGCTACTGATCTCAGAGCACCAATGAACTATCCTCGTGCAATGTCAACAAAATCATATGGCCCAGGCTGGCAGTCATCCGTGGCTCCAAAATTTACCCCTAGGATCACTTCACTCCCAACTACATCACCGAGAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGTGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA-CA-AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA-CTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTA-CTATTAGTTTACCA-TCA-CTCA-CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA-CA-TTATTACCTTTA-CCA-TTTTCTTTGTTTGAAACA-AAAA-CA-TGTGTTTCTCCTATGTATTTCCA-GGA-CCAAAAGAACGATGTCGAAATTGTATATATTGAGTTTGAGCTGTGCTAATATATGATTTGTGTAAAATGCTCTCCCAAAAAAAAAA] [+] EMBL AK072978 [TCTCTCCTCCATTTTTGTGAGTTTTTTTTTGTTGTTTTTTTTTTTTTGGTCTCGCGAAATCCAAAGACCCAAGAACAACCAAAAAGGCCAATCCTTTTCTCCTCCTCCTCCTCCATCTCCATCTCCTCTTCGAGTCCTCGTCGTCGTGGTGGTCGTCGGAGGTGGTATTCTTGATTTGATTCGAGGAGGCGGGGGGGGGGGGGGGAGATGAAATCGCCATTGCGGAAGTTCAGGGGATTCGGTCTCCACAGCCACAGGGAGAGGAAGGACCACCGCCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGAAATGGAGGAAATGAGGAATTGTTATGACAGCTTGCTTTCAGCTGCAGCTGCAACAATGAACAGTGTATATGAGTTTGCAGAAGCTATGGAGGAAATGGGAACTTGCTTACTTGAGAAAACTGCATTGAATTATGATGATGATGACAGTGGCAGAGTTCTGATGATGCTAGGAAAGGCCCAATTCGAACTGCAGAAGTTTGTTGATAACTATCGTACAAATATCATAAATACCATCACAAACCCATCAGAGTCACTTCTCAAAGAGCTACAAGTTGTAGAGGAAATGAAGGAACTCTGTGATCATAAAAGACAGGAATATGAAGCCATGCGAGCAGCCTATAGAGAGAAAGGACGGTCAAGGCATTCCAAAACCGAAACATTATCCTCGGAACAGCTGCAAGCTTATTTTCTTGACTATCAAGAGGATGCAGCATTGTTTATATTCCGATTGAAATCATTGAAGCAAGGTCAATTCCGTAGTATTTTAACACAGGCTGCTCGCCACCATTCTGCTCAGTTGAGTTTTTTCAGGCGAGGGTTGAAGTATCTAGAGGCTCTGGAACCTCATGTAAAAGCAGTTGCTGAGAAACAGCACATTGAATACCCTTTAAATGGACTAGATGACGACACAGATAATGATGAGTACAGCTCTTACCAGGGCAATCAAAGTGATGACAGTGAGTTAAGTTTTGACTATGAGATAAATGACAGGGATAAGGACTTCCCCGCTTCCAGAAGTTCAATGGATTTGGATCAGTCTAATCAGGCATGTTCCCCAGAACCTCTGAAGGAACACAAGCAGGAATATACCGAACAAATACAGGCAGATTTTGCAGCTCCTCGAGTGAAGCTTGAGATTGGTACCCAATCAGCGCCAATTTCTGCTGACAATGTGTTTGATCCATCTACAAGGTTTCGGAAAATGAATACGTCAAACAGAACAAATTATTCGTACAAACTCCCGACACCAGATGATGACAAGAACTCCACTTCAGCACACACCAATAGATCTCCTCATTCAGATCAACCAGAAAGTAAATCTCACGTAGCAGAAAATTTATGGCATTCCTCTCCACTGGTCAAAGGTTTTAAACCAAACTCCATGTTTAGTGGACCTGTTAAGATGCCATCAAGTACTGAAGGGATATCAGCGCCACTTGTTTATCCCTACGCTACTTCAGATTTTAAGAAAATGAAGAGGGAAGCATTTTCCGGTCCAATTCCAAGCAAAGCAGGATTGAACAAGCCCTTGTTTTCTGCTACTGATCTCAGAGCACCAATGAACTATCCTCGTGCAATGTCAACAAAATCATATGGCCCAGGCTGGCAGTCATCCGTGGCTCCAAAATTTACCCCTAGGATCACTTCACTCCCAACTACATCACCGAGAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGTGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA CA AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTA CTATTAGTTTACCA TCA CTCA CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA CA TTATTACCTTTA CCA TTTTCTTTGTTTGAAACA AAAA CA TGTGTTTCTCCTATGTATTTCCA GGA CCAAAAGAACGATGTCGAAATTGTATATATTGAGTTT ] [+] EMBL CA765992 [ GAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGCGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA CA AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTT ] [+] EMBL BM421705 [ TGTTTCCC CAGATC ACAGCAG AACAGCTCTTGAAAAAACCACAGGATGATGGAAACCTTGTGAAAACTTGCATGGCCCAACTTCAGTCATCATA GCCATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCACCTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACCACCTTATGGATTTAGTGAATCTGACTA CTATTAGTTTACCACTCACCTCAGCTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATACCACTTATTACCTTTACCCACTTTTCTTTGTTTGAAACACAAAACCACTGTGTTTCTCCTATGTATTTCCACGGACCCCAAAGAACGATGTCGAAATTGTATATATTGAGTTTGAGCTGTGCTAATATATGATTTGTGTAAAATGCTCTCCCAAAAAAAAAA] [+] EMBL BQ908596 [ aTTTGTA GTAATTATTTG GCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTTTTGTTTCTTTTGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTACCTATTAGTTTACCA TCACCTCA CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA CA TTA TACC TTA CCA TTTTCTTTG TTGAAACA AAAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||