cluster # 6643

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Oryza sativa
cluster # 6643 cluster # 6643 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6643#0 length = 2506 sequences # 4
consensusID : consensus_6643#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2506
fasta sequence
                              [TCTCTCCTCCATTTTTGTGAGTTTTTTTTTGTTGTTTTTTTTTTTTTGGTCTCGCGAAATCCAAAGACCCAAGAACAACCAAAAAGGCCAATCCTTTTCTCCTCCTCCTCCTCCATCTCCATCTCCTCTTCGAGTCCTCGTCGTCGTGGTGGTCGTCGGAGGTGGTATTCTTGATTTGATTCGAGGAGGCGGGGGGGGGGGGGGGAGATGAAATCGCCATTGCGGAAGTTCAGGGGATTCGGTCTCCACAGCCACAGGGAGAGGAAGGACCACCGCCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGAAATGGAGGAAATGAGGAATTGTTATGACAGCTTGCTTTCAGCTGCAGCTGCAACAATGAACAGTGTATATGAGTTTGCAGAAGCTATGGAGGAAATGGGAACTTGCTTACTTGAGAAAACTGCATTGAATTATGATGATGATGACAGTGGCAGAGTTCTGATGATGCTAGGAAAGGCCCAATTCGAACTGCAGAAGTTTGTTGATAACTATCGTACAAATATCATAAATACCATCACAAACCCATCAGAGTCACTTCTCAAAGAGCTACAAGTTGTAGAGGAAATGAAGGAACTCTGTGATCATAAAAGACAGGAATATGAAGCCATGCGAGCAGCCTATAGAGAGAAAGGACGGTCAAGGCATTCCAAAACCGAAACATTATCCTCGGAACAGCTGCAAGCTTATTTTCTTGACTATCAAGAGGATGCAGCATTGTTTATATTCCGATTGAAATCATTGAAGCAAGGTCAATTCCGTAGTATTTTAACACAGGCTGCTCGCCACCATTCTGCTCAGTTGAGTTTTTTCAGGCGAGGGTTGAAGTATCTAGAGGCTCTGGAACCTCATGTAAAAGCAGTTGCTGAGAAACAGCACATTGAATACCCTTTAAATGGACTAGATGACGACACAGATAATGATGAGTACAGCTCTTACCAGGGCAATCAAAGTGATGACAGTGAGTTAAGTTTTGACTATGAGATAAATGACAGGGATAAGGACTTCCCCGCTTCCAGAAGTTCAATGGATTTGGATCAGTCTAATCAGGCATGTTCCCCAGAACCTCTGAAGGAACACAAGCAGGAATATACCGAACAAATACAGGCAGATTTTGCAGCTCCTCGAGTGAAGCTTGAGATTGGTACCCAATCAGCGCCAATTTCTGCTGACAATGTGTTTGATCCATCTACAAGGTTTCGGAAAATGAATACGTCAAACAGAACAAATTATTCGTACAAACTCCCGACACCAGATGATGACAAGAACTCCACTTCAGCACACACCAATAGATCTCCTCATTCAGATCAACCAGAAAGTAAATCTCACGTAGCAGAAAATTTATGGCATTCCTCTCCACTGGTCAAAGGTTTTAAACCAAACTCCATGTTTAGTGGACCTGTTAAGATGCCATCAAGTACTGAAGGGATATCAGCGCCACTTGTTTATCCCTACGCTACTTCAGATTTTAAGAAAATGAAGAGGGAAGCATTTTCCGGTCCAATTCCAAGCAAAGCAGGATTGAACAAGCCCTTGTTTTCTGCTACTGATCTCAGAGCACCAATGAACTATCCTCGTGCAATGTCAACAAAATCATATGGCCCAGGCTGGCAGTCATCCGTGGCTCCAAAATTTACCCCTAGGATCACTTCACTCCCAACTACATCACCGAGAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGTGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA-CA-AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA-CTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTA-CTATTAGTTTACCA-TCA-CTCA-CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA-CA-TTATTACCTTTA-CCA-TTTTCTTTGTTTGAAACA-AAAA-CA-TGTGTTTCTCCTATGTATTTCCA-GGA-CCAAAAGAACGATGTCGAAATTGTATATATTGAGTTTGAGCTGTGCTAATATATGATTTGTGTAAAATGCTCTCCCAAAAAAAAAA]

[+] EMBL AK072978             [TCTCTCCTCCATTTTTGTGAGTTTTTTTTTGTTGTTTTTTTTTTTTTGGTCTCGCGAAATCCAAAGACCCAAGAACAACCAAAAAGGCCAATCCTTTTCTCCTCCTCCTCCTCCATCTCCATCTCCTCTTCGAGTCCTCGTCGTCGTGGTGGTCGTCGGAGGTGGTATTCTTGATTTGATTCGAGGAGGCGGGGGGGGGGGGGGGAGATGAAATCGCCATTGCGGAAGTTCAGGGGATTCGGTCTCCACAGCCACAGGGAGAGGAAGGACCACCGCCCGCCGCCGGCCAAGCTCGACGAGCTCGCCGACGCCGCCCAGGAAATGGAGGAAATGAGGAATTGTTATGACAGCTTGCTTTCAGCTGCAGCTGCAACAATGAACAGTGTATATGAGTTTGCAGAAGCTATGGAGGAAATGGGAACTTGCTTACTTGAGAAAACTGCATTGAATTATGATGATGATGACAGTGGCAGAGTTCTGATGATGCTAGGAAAGGCCCAATTCGAACTGCAGAAGTTTGTTGATAACTATCGTACAAATATCATAAATACCATCACAAACCCATCAGAGTCACTTCTCAAAGAGCTACAAGTTGTAGAGGAAATGAAGGAACTCTGTGATCATAAAAGACAGGAATATGAAGCCATGCGAGCAGCCTATAGAGAGAAAGGACGGTCAAGGCATTCCAAAACCGAAACATTATCCTCGGAACAGCTGCAAGCTTATTTTCTTGACTATCAAGAGGATGCAGCATTGTTTATATTCCGATTGAAATCATTGAAGCAAGGTCAATTCCGTAGTATTTTAACACAGGCTGCTCGCCACCATTCTGCTCAGTTGAGTTTTTTCAGGCGAGGGTTGAAGTATCTAGAGGCTCTGGAACCTCATGTAAAAGCAGTTGCTGAGAAACAGCACATTGAATACCCTTTAAATGGACTAGATGACGACACAGATAATGATGAGTACAGCTCTTACCAGGGCAATCAAAGTGATGACAGTGAGTTAAGTTTTGACTATGAGATAAATGACAGGGATAAGGACTTCCCCGCTTCCAGAAGTTCAATGGATTTGGATCAGTCTAATCAGGCATGTTCCCCAGAACCTCTGAAGGAACACAAGCAGGAATATACCGAACAAATACAGGCAGATTTTGCAGCTCCTCGAGTGAAGCTTGAGATTGGTACCCAATCAGCGCCAATTTCTGCTGACAATGTGTTTGATCCATCTACAAGGTTTCGGAAAATGAATACGTCAAACAGAACAAATTATTCGTACAAACTCCCGACACCAGATGATGACAAGAACTCCACTTCAGCACACACCAATAGATCTCCTCATTCAGATCAACCAGAAAGTAAATCTCACGTAGCAGAAAATTTATGGCATTCCTCTCCACTGGTCAAAGGTTTTAAACCAAACTCCATGTTTAGTGGACCTGTTAAGATGCCATCAAGTACTGAAGGGATATCAGCGCCACTTGTTTATCCCTACGCTACTTCAGATTTTAAGAAAATGAAGAGGGAAGCATTTTCCGGTCCAATTCCAAGCAAAGCAGGATTGAACAAGCCCTTGTTTTCTGCTACTGATCTCAGAGCACCAATGAACTATCCTCGTGCAATGTCAACAAAATCATATGGCCCAGGCTGGCAGTCATCCGTGGCTCCAAAATTTACCCCTAGGATCACTTCACTCCCAACTACATCACCGAGAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGTGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA CA AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTA CTATTAGTTTACCA TCA CTCA CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA CA TTATTACCTTTA CCA TTTTCTTTGTTTGAAACA AAAA CA TGTGTTTCTCCTATGTATTTCCA GGA CCAAAAGAACGATGTCGAAATTGTATATATTGAGTTT                                                 ]
[+] EMBL CA765992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAATAAGTGAGCTACATGAACTGCCTAGGCCTCCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCAAGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCTCTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGAACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGCGAAGTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCAGAAACAGCTCTTGAAAAAA CA AGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAACTTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM421705             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTTCCC CAGATC ACAGCAG AACAGCTCTTGAAAAAACCACAGGATGATGGAAACCTTGTGAAAACTTGCATGGCCCAACTTCAGTCATCATA GCCATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCACCTGGTTGGAAGATTTTTGTTTCTTTGGCCGGCTTTTCTGACCACCTTATGGATTTAGTGAATCTGACTA CTATTAGTTTACCACTCACCTCAGCTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATACCACTTATTACCTTTACCCACTTTTCTTTGTTTGAAACACAAAACCACTGTGTTTCTCCTATGTATTTCCACGGACCCCAAAGAACGATGTCGAAATTGTATATATTGAGTTTGAGCTGTGCTAATATATGATTTGTGTAAAATGCTCTCCCAAAAAAAAAA]
[+] EMBL BQ908596             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        aTTTGTA GTAATTATTTG GCATTCTAGATTGCCCTCTGTAAATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCA CTGGTTGGAAGATTTTTGTTTCTTTTGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTACCTATTAGTTTACCA TCACCTCA CTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATTGGCGCTGTAAATA CA TTA TACC TTA CCA TTTTCTTTG TTGAAACA AAAAaaaaa                                                                                                                 ]




>consensus_6643#0
TCTCTCCTCCATTTTTGTGAGTTTTTTTTTGTTGTTTTTTTTTTTTTGGTCTCGCGAAAT
CCAAAGACCCAAGAACAACCAAAAAGGCCAATCCTTTTCTCCTCCTCCTCCTCCATCTCC
ATCTCCTCTTCGAGTCCTCGTCGTCGTGGTGGTCGTCGGAGGTGGTATTCTTGATTTGAT
TCGAGGAGGCGGGGGGGGGGGGGGGAGATGAAATCGCCATTGCGGAAGTTCAGGGGATTC
GGTCTCCACAGCCACAGGGAGAGGAAGGACCACCGCCCGCCGCCGGCCAAGCTCGACGAG
CTCGCCGACGCCGCCCAGGAAATGGAGGAAATGAGGAATTGTTATGACAGCTTGCTTTCA
GCTGCAGCTGCAACAATGAACAGTGTATATGAGTTTGCAGAAGCTATGGAGGAAATGGGA
ACTTGCTTACTTGAGAAAACTGCATTGAATTATGATGATGATGACAGTGGCAGAGTTCTG
ATGATGCTAGGAAAGGCCCAATTCGAACTGCAGAAGTTTGTTGATAACTATCGTACAAAT
ATCATAAATACCATCACAAACCCATCAGAGTCACTTCTCAAAGAGCTACAAGTTGTAGAG
GAAATGAAGGAACTCTGTGATCATAAAAGACAGGAATATGAAGCCATGCGAGCAGCCTAT
AGAGAGAAAGGACGGTCAAGGCATTCCAAAACCGAAACATTATCCTCGGAACAGCTGCAA
GCTTATTTTCTTGACTATCAAGAGGATGCAGCATTGTTTATATTCCGATTGAAATCATTG
AAGCAAGGTCAATTCCGTAGTATTTTAACACAGGCTGCTCGCCACCATTCTGCTCAGTTG
AGTTTTTTCAGGCGAGGGTTGAAGTATCTAGAGGCTCTGGAACCTCATGTAAAAGCAGTT
GCTGAGAAACAGCACATTGAATACCCTTTAAATGGACTAGATGACGACACAGATAATGAT
GAGTACAGCTCTTACCAGGGCAATCAAAGTGATGACAGTGAGTTAAGTTTTGACTATGAG
ATAAATGACAGGGATAAGGACTTCCCCGCTTCCAGAAGTTCAATGGATTTGGATCAGTCT
AATCAGGCATGTTCCCCAGAACCTCTGAAGGAACACAAGCAGGAATATACCGAACAAATA
CAGGCAGATTTTGCAGCTCCTCGAGTGAAGCTTGAGATTGGTACCCAATCAGCGCCAATT
TCTGCTGACAATGTGTTTGATCCATCTACAAGGTTTCGGAAAATGAATACGTCAAACAGA
ACAAATTATTCGTACAAACTCCCGACACCAGATGATGACAAGAACTCCACTTCAGCACAC
ACCAATAGATCTCCTCATTCAGATCAACCAGAAAGTAAATCTCACGTAGCAGAAAATTTA
TGGCATTCCTCTCCACTGGTCAAAGGTTTTAAACCAAACTCCATGTTTAGTGGACCTGTT
AAGATGCCATCAAGTACTGAAGGGATATCAGCGCCACTTGTTTATCCCTACGCTACTTCA
GATTTTAAGAAAATGAAGAGGGAAGCATTTTCCGGTCCAATTCCAAGCAAAGCAGGATTG
AACAAGCCCTTGTTTTCTGCTACTGATCTCAGAGCACCAATGAACTATCCTCGTGCAATG
TCAACAAAATCATATGGCCCAGGCTGGCAGTCATCCGTGGCTCCAAAATTTACCCCTAGG
ATCACTTCACTCCCAACTACATCACCGAGAATAAGTGAGCTACATGAACTGCCTAGGCCT
CCAGCAAATGTAGGTGCTGCCCGTCCTGGTTTGGTTGGATATTCTGGCCCTCTGGTATCA
AGGCGGCAGGTGCCTAATGTACCGACCCGCGCCTCACCACCATCACAAACAGCATCACCT
CTTCCACGGCCACCTGCTGCCATGACCCGCAGTTATTCTATACCTTCAAATAGCCAAAGA
ACACCCATTCTTACCGTGAATAAGTTGTTGGAAGCTAGGCATAGCAGAGAGAGTAGTGAA
GTTTCCTCTCCCCCATTAACACCTATATCTTTGGCTGATGTTTCCCGCAGATCAACAGCA
GAAACAGCTCTTGAAAAAACAAGGATGATGGAAACCTTGTGAAAACTTGCATGGCCAAAC
TTCAGTCATCATAGGCAATTTTGTATGTAATTATTTGTGCATTCTAGATTGCCCTCTGTA
AATTTATGTTTCTTGCGAAGGAAAAAGTTGAAATAAAGGCGCACTGGTTGGAAGATTTTT
GTTTCTTTGGCCGGCTTTTCTGACAACCTTATGGATTTAGTGAATCTGACTACTATTAGT
TTACCATCACTCACTCAATATTCTGATTTTTTTGGGGGGATTGCTGATGTGAACTATATT
GGCGCTGTAAATACATTATTACCTTTACCATTTTCTTTGTTTGAAACAAAAACATGTGTT
TCTCCTATGTATTTCCAGGACCAAAAGAACGATGTCGAAATTGTATATATTGAGTTTGAG
CTGTGCTAATATATGATTTGTGTAAAATGCTCTCCCAAAAAAAAAA
clustalw multiple alignements is not computed in this case