These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6645#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3574 fasta sequence [CAGAGAGAGGAGAAAAAACACAAAAGGCAGCGAAGCGGCCGCGAAAAGCTCGACTCGGAGATAAAAGGGAAAGCGAGCGAGAAAGAGAGAGGAGAAGCATTGGTGGCGTGAGGCGGTTGGAGCGGGGCACGCGCGCGGCCGAAGGGGGGAGAGGAGAGAGGAGGCGGGGTGGCGCCGACGCCGGCGGCAAAGGTTGGTTGTCCTAGGGTTCCTGTCGTTGCTCGCGGGAAGGGTCAGCGAAGCAAAATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCAGGGAAGTGGCCACCAAGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCAGAAGATGAGTTAGCGGAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGGAGGGGTTCTGTCCTGGAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTTGCACTTGGTCACCTCACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTGGGCACTGAAGCTAACAATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTCAAATACTATATGTCCAAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGGAACCAGTTTGGCAAGTCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGGTCCTTACTTCTTGGTCATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAGTCACCAAGTTTGGATTCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACATCTAACTTAGGGGGCCACAGTCCAAATCTTGTAGATTCAATTAAGGAAAACTTTCATCGGAGCAATGGTTTGTATGATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGGTCGATTTATTCTGGCATTAGTTCATTGAAGAATTCCTCACTTTATGTTGTCCAGTCATCAGACTTGAATGGATTTCCACCAGATGCTCATCAGCGTTCCCCTAGACCTATTAGGACTCCAGTCAGTACAAAACTTACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACTTCATCCTGTTCTGACTACAGTACTATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAACCTGGTGAACCAGTTGGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAATATTAGTCCGGATATCCTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCAGTGTGGAATGGCCTATCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGAATTAATCTTCCTCAAGTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCTGGTGATGTTCAACTGATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCTTTTGGGATACCATGTTATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGAATCGGCGGCTATGGTTTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCTCAACTTCCTGGTTTTCCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCATATAAGATGTATGAGCATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTTACGCATTATTTTCAACAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCGTATGATACAATGGTTTCAAGTAATAATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATTGACCCATCAGAGCAGAAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACTCCCATCAAAGGTGGAAAGCCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTACCGATGCCTTATCCAGCAGGTCCAACATTACATGGGCAACCTGCTTCTGGAACATCTCCTCGTGACAAAAGGAACGATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGTTCCGAGATACAAGGTCAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCTGTTGAAGAACTAATATCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAGATAGTGAAATACAGCTCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAATTGCACCATTGAAGAAAAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTGATGACTGATGTATTCGGAAATTATGTTATTCAGAAGTTCTTCGAAAAGGGGAGCCCACAGCAAAAGAGAGAAATAGCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATGTATGGATGCAGAGTAATTCAGAAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTTCTTGTTGGTGAACTCGATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCATGTTATACAAAAATGCATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCTTTTCAGTGCCAGGTTGCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGAGAATCCTCGAGCGTTGCAGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAGTCTGCTTGCATCCTCGCACAAGATCAGTATGGGAACTATGTTGTGCAGCATGTTTTGGAGAAAGGGAATGAACATGAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTGCCCATGAGCCAAAACAAATTTGCGTCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGTGCAGAGCGGGAACTTTTGGTCAAGGAGATT-CTGAAGCAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACAT-GCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGAATTCGCCACAGGAAAGCCGATTCTTTTCTGCCAACCCTGTCAAGTTCAGCGTAGAAGGCCTATCAGTCGCAAAAGTGGCTAACAAAGCAACC-AAAAAAAAAAACTGTCAACCTGTCACCATAGATCATCATCATACAGATATAGTCGTTCCAAGCGGTTTGTCCGTGTATTTAAGCTAGGAAATGATAGTGTCATACTATAGGAATGGTAATAATCATCTGTGTGGGCTGTGGCTGTGGATGCTGCGTCTCACAGAAGAGAGTCTGAGTGTGGTGGTGCGTTGCCGTACAGTACATATCCCGTAGTCTTGAGTCTTGTACCCCTGCTTGGTGATGTGTAGTTATCGCCGCATCCAGCAAAA] [+] EMBL AK070870 [CAGAGAGAGGAGAAAAAACACAAAAGGCAGCGAAGCGGCCGCGAAAAGCTCGACTCGGAGATAAAAGGGAAAGCGAGCGAGAAAGAGAGAGGAGAAGCATTGGTGGCGTGAGGCGGTTGGAGCGGGGCACGCGCGCGGCCGAAGGGGGGAGAGGAGAGAGGAGGCGGGGTGGCGCCGACGCCGGCGGCAAAGGTTGGTTGTCCTAGGGTTCCTGTCGTTGCTCGCGGGAAGGGTCAGCGAAGCAAAATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCAGGGAAGTGGCCACCAAGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCAGAAGATGAGTTAGCGGAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGGAGGGGTTCTGTCCTGGAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTTGCACTTGGTCACCTCACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTGGGCACTGAAGCTAACAATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTCAAATACTATATGTCCAAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGGAACCAGTTTGGCAAGTCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGGTCCTTACTTCTTGGTCATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAGTCACCAAGTTTGGATTCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACATCTAACTTAGGGGGCCACAGTCCAAATCTTGTAGATTCAATTAAGGAAAACTTTCATCGGAGCAATGGTTTGTATGATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGGTCGATTTATTCTGGCATTAGTTCATTGAAGAATTCCTCACTTTATGTTGTCCAGTCATCAGACTTGAATGGATTTCCACCAGATGCTCATCAGCGTTCCCCTAGACCTATTAGGACTCCAGTCAGTACAAAACTTACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACTTCATCCTGTTCTGACTACAGTACTATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAACCTGGTGAACCAGTTGGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAATATTAGTCCGGATATCCTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCAGTGTGGAATGGCCTATCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGAATTAATCTTCCTCAAGTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCTGGTGATGTTCAACTGATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCTTTTGGGATACCATGTTATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGAATCGGCGGCTATGGTTTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCTCAACTTCCTGGTTTTCCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCATATAAGATGTATGAGCATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTTACGCATTATTTTCAACAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCGTATGATACAATGGTTTCAAGTAATAATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATTGACCCATCAGAGCAGAAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACTCCCATCAAAGGTGGAAAGCCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTACCGATGCCTTATCCAGCAGGTCCAACATTACATGGGCAACCTGCTTCTGGAACATCTCCTCGTGACAAAAGGAACGATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGTTCCGAGATACAAGGTCAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCTGTTGAAGAACTAATATCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAGATAGTGAAATACAGCTCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAATTGCACCATTGAAGAAAAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTGATGACTGATGTATTCGGAAATTATGTTATTCAGAAGTTCTTCGAAAAGGGGAGCCCACAGCAAAAGAGAGAAATAGCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATGTATGGATGCAGAGTAATTCAGAAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTTCTTGTTGGTGAACTCGATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCATGTTATACAAAAATGCATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCTTTTCAGTGCCAGGTTGCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGAGAATCCTCGAGCGTTGCAGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAGTCTGCTTGCATCCTCGCACAAGATCAGTATGGGAACTATGTTGTGCAGCATGTTTTGGAGAAAGGGAATGAACATGAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTGCCCATGAGCCAAAACAAATTTGCGTCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGTGCAGAGCGGGAACTTTTGGTCAAGGAGATT CTGAAGCAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACAT GCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGAATTCGCCACAGGAAAGCCGACTCTTTTCTGCCAACCCTGTCAAGTTCAGCGTAGAAGGCCTATCAGTCGCAAAAGTGGCTAACAAAGCAACC AAAAAAAAAAACTGTCAACCTGTCACCATAGATCATCATCATACAGATATAGTCGTTCCAAGCGGTTTGTCCGTGTATTTAAGCTAGGAAATGATAGTGTCATACTATAGGAATGGTAATAATCATCTGTGTGGGCTGTGGCTGTGGATGCTGCGTCTCACAGAAGAGAGTCTGAGTGTGGTGGTGCGTTGCCGTACAGTACATATCCCGTAGTCTTGAGTCTTGTACCCCTGCTTGGTGATGTGTAGTTATCGCCGCATCCAGC ] [+] EMBL BI796550 [ caTATGGGAACTATGTTGT CAGCATGTTTTGGAGAAAGGGAATGAACATGAAA GGGCC AATCATCACTAAATT GCT GGCAGGTAGTGCCCATGAGCC AAC AATTTGCGTCTAATGTCATAGAGAGGTGTTTTGAACAT GGGGCAGTCCAGAGCGGGAACTTTTGGTCAAGGAGATTCCTGAA CAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTAC ACATGGCAATGAAC ACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCC AAAAAACTGTAACCAAGGGCTGCTGAATTCGCCACAGGAAAGCCGATTCTTTTCTGCCAACCCTGTCAAGTTCAGCGTAGAAGGCCTATCAGTCGC AAAGTGGCTAACAAAGCAACC AAAAAA ] [+] EMBL AA750646 [ TGAAGCAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACAT GCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCC ] [-] EMBL CA763072 [ acaagggGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACAT GCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTTTGCGGTGACGGAGCTGTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGAATTCGCCACAGGAAAGCCGATTCTTTTCTGCCAACCCTGTCAAGTTCAGCGTAGAAGGCCTATCAGTCGCAAAAGTGGCTAACAAAGCAACCAAAAAAAAAAAACTGTCAACCTGTCACCATAGATCATCATCATACAGGTATAGTCGTTCCAAGCGGGTGGTCCGTGTATTTAAGCTAGGAAATGATAGTGTCATACTATAGGAATGGTAATAATCATCTGTGTGGGCTGTGGCTGTGGATGCTGCGTCTCACAGAAGAGAGTCTGAGTGTGGTGGTGCGTTGCCGTACAGTACATATCCCGTAGTCTTGAGTCTTGTACCCCTGCTTGGTGATGTGTAGTTATCGCCGCAaaaaaaaaaa] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||