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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6666 cluster # 6666       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6666#0 length = 763 sequences # 4  

consensusID : consensus_6666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 763
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTAAATCCCCAAAATGAACTGATGATTCTAATTAAAACATCGGTACAGATTCAGGCAAATTTGATATTACAGAAGCCCACATGGGTGTCAGTTCACCCAAACTTTTAGCAAAATAACTGTAGCACAACACTCAGTAATAGATGAATTATCTATTGGTTCGGCTGTCTAAGCGAATTCATGTTTGAATCTGCAGTATAGTTTGACATTCCCCTTTCAAAAGTTTCCTCTCATCAGAAATCACCCTAAAGCTTCAAACTTTGTTATGGCTGATAT-CCCTGGATTTGTGATGGTCCAGCCTGTGTTTCTGGCTCCAGCAGTTCGATCAACCGAGCGACCGTTTCTTCGTGTGTACCATTTGG-CATGACGAACTCACCATC-AACAACAACTTG-AAGTGACTCATAACCTATTGATTTGAATATAGC-TTCTTTCATCTGGCGTTCCCTACCCGTTTCTTGTATCTTGATTTTCAGCTCATTGTTTTGAGCTAAAAGCTCATTAAATGTCCTCTGAGCCGTCGCCAATTTTTCAGACAACTTCTCAATCTCTATCTTCAACACCAGCACCTTACTTTCAAGCTCAAG-GTATAGTTCAACCTGCGCTCCTTGGACCTCGCAGCAGATCTCCTATTGCATAGAACCCTCTTGACCTTCTTCGGATCACTCAACACGAGCTGCGAGAGGTACTCACTCGCCATGATCGTCTTCTTGTCAGCCTCACTGAACTCCCCATCGCCGAGGTTGGCAGCA]

[-] EMBL AU094545             [TTTTTTTTTTTTTTTTTTTTTTTCCCCAAAATGAACTGATGATTCTAATTAAAACATCGGTCCAGATGCAGGCAAATTTGATATTACAGAAGCCCACATGGGTGTCAGTTCACCCAAACTTTTAGCAAAATAACTGTAGCACAACACTCAGTAATAGATGAATTATCTATTGGTTCGGCTGTCTAAGCGAATTCATGTTTGAATNTGCAGTATAGTTTGACATTCCCCTTTCAAAAGTTTCCTCTCATCAGAAATCACCCTAAAGCTTCAAACTTTGTTATGGCTGATAT CCCTGGATTTGTGATGGTCCAGCCTGTGTTTCTGGCTCCAGCAGTTCGATCAACCGAGCGACCGTTTNTTCGTGNGTACCATTTGG CATGACGAACTCACCATC AACAACAACTTG AAGTGACTCATAACCTATTGATTTGAATATAGC TTCTTTCATCTGGCGTTCCCTACCCGTTTCTTGTATCTNGATTTTCAGCTCATTGTTTTGAGCTAAAAGCTCATTAAATGTCCTCTGAGCCGTCGCCAATTTTTCAGACAACTTCTCAATCTCTATCTTCAACACCAGCACCTTACTTTCAAGCTCAAG GTATAGTTCAACCTGCGCTCCTTGGACCT GCAGCAGATCTCCTATTGCA                                                                                                                   ]
[+] EMBL CA762725             [        TTTTTTTTTTTAAATCCCCAAAATGAACTGATGATTCTAATTAAAACATCGGTACAGATTCAGGCAAATTTGATATTACAGAAGCCCACATGGGTGTCAGTTCACCCAAACTTTTAGCAAAATAACTGTAGCACAACACTCAGTAATAGGTGAATTATCTATTGGTTCGGCTGTCTAAGCGAATTCATGTTTGAATCTGCAGTATAGTTTGACATTCCCCTTTCAAAAGTTTCCTCTCATCAGAAATCACCCTAAAGCTTCAAACTTTGTTATGGCTGATAT CCCTGGATTTGTGATGGTCCAGCCTGTGTTTCTGGCTCCAGCAGTTCGATCAACCGAGCGACCGTTTCTTCGTGTGTACCATTTGG CATGACGAACTCACCATC AACAACAACTTG AAGTGACTCATAACCTATTGATTTGAATATAGC TTCTTTCATCTGGCGTTCCCTACCCGTTTCTTGTATCTTGATTTTCAGCTCATTGTTTTGAGCTAAAAGCTCATTAAATGTTCTCTGAGCCGTCGCCAATTTTTCAGACAACTTCTCAATCTCTATCTTCAACACCAGCACCTTACTTTCAAGCTCAAGCTTATAGTTCAACCTGCGCTCCTTGGACCTCGCAGCAGATCTCCTATTGCATAGAACCCTCTTGACCTTCTTCGGATCACTCAACACGAGCTGCGAGAGGTACT                                                              ]
[-] EMBL AA751544             [             ctaataAAATCCCCAAAATGAACTGATGATTNTAATTAAAACATCGGTACAGATTCAGGCAAATTTGATATTACAGAAGCCCACATGGGTGTCAGTTCACCCAAACTTTTAGCAAAATAACTGTAGCACAACACTCAGTAATAGATGAATTATCTATTGGTTCGGCTGTCTAAGCGAATTCATGTTTGAATCTGCAGTATAGTTTGACATTCCCCTTTCAAAAGTTTCCTNTCATCAGAAATCACCCTAAAGCTTCAAACTTTGTTATGGCTGATATCCCCTGGATTTGTGATGGTCCAGCCTGTGTTTCTGGCTCCAGCAGTTCGATCAACCGAGCGACCG TTCTTCTCGTGcc                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL OSC2551              [                                                                                                                                                                                                                                                                                                                                        CCAGCAGTCGGATCAACCGAACGACCGTTTCTCCGTGTGTACCATTTGGNCATGACGAACTCACCATCAAACAACAACTTGAAAGTGACTCATAACCTATTGATTTGAATATAGCTTTCTTTCATCTGGCGTTCCCTACCCGTTTCTTGTATCTTGATTTTCAGCTCATTGTTTTGAGCTAAAAGCTCATTAAATGTCCTCTGAGCCGTCGCCAATTTTTCAGACAACTTCTCAATCTCTATCTTCAACACCAGCACCTTACTTTCAAGCTCAAG GTATAGTTCAACCTGCGCTCCTTGGACCTCGCAGCAGATCTCCTATTGCATAGAACCCTCTTGACCTTCTTCGGATCACTCAACACGAGCTGCGAGAGGTACTCACTCGCCATGATCGTCTTCTTGTCAGCCTCACTGAACTCCCCATCGCCGAGGTTGGCAGCA]


>consensus_6666#0 TTTTTTTTTTTTTTTTTTTAAATCCCCAAAATGAACTGATGATTCTAATTAAAACATCGG TACAGATTCAGGCAAATTTGATATTACAGAAGCCCACATGGGTGTCAGTTCACCCAAACT TTTAGCAAAATAACTGTAGCACAACACTCAGTAATAGATGAATTATCTATTGGTTCGGCT GTCTAAGCGAATTCATGTTTGAATCTGCAGTATAGTTTGACATTCCCCTTTCAAAAGTTT CCTCTCATCAGAAATCACCCTAAAGCTTCAAACTTTGTTATGGCTGATATCCCTGGATTT GTGATGGTCCAGCCTGTGTTTCTGGCTCCAGCAGTTCGATCAACCGAGCGACCGTTTCTT CGTGTGTACCATTTGGCATGACGAACTCACCATCAACAACAACTTGAAGTGACTCATAAC CTATTGATTTGAATATAGCTTCTTTCATCTGGCGTTCCCTACCCGTTTCTTGTATCTTGA TTTTCAGCTCATTGTTTTGAGCTAAAAGCTCATTAAATGTCCTCTGAGCCGTCGCCAATT TTTCAGACAACTTCTCAATCTCTATCTTCAACACCAGCACCTTACTTTCAAGCTCAAGGT ATAGTTCAACCTGCGCTCCTTGGACCTCGCAGCAGATCTCCTATTGCATAGAACCCTCTT GACCTTCTTCGGATCACTCAACACGAGCTGCGAGAGGTACTCACTCGCCATGATCGTCTT CTTGTCAGCCTCACTGAACTCCCCATCGCCGAGGTTGGCAGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)