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Oryza sativa
cluster # 6693 cluster # 6693       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6693#0 length = 2575 sequences # 3  
 consensus_6693#1 length = 1577 sequences # 1  
consensusID : consensus_6693#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2575
fasta sequence 
                              [GGCCTGACCGCGGCGCCGAGCGTCCGTCCGTCTGCACGCCGGAGGAGAAGACACACGGCGATGAGCTCCTGCGAGGCGAGGCGGGCGCACGCGGTGCTCATCCCGCAGCCGGCGCAGGGCCACGTCACGCCCATGCTGCACCTCGCCAAGGCGCTGCACGCCAGGGGGTTCTTCGTCACCTACGTCAACTCCGAGTACAACCACCGCCGCCTGCTCCGGTCCAGCGGCCCTGGCGCGCTGGCCGGCGCCGCGGGCTTCCGTTTCGAGGCCGTGCCGGACGGCATGCCGGAGTCCGGCAACGACGACGTCACGCAGGACATCGCCGCGCTCTGCGTGTCCACCACCAGGCACAGCGCCGAGCCGTTCAGGGAGCTGTTGGTGAGGCTGAACAGCACGCCCGGGACGCCGCCGGTGAGCTGCGTCATAGCCGACGGCGTGATGAGCTTCGTGCAGAGGGTCGCCGAGGAGATGGGCATCCTGGCCTTGGTGTTCTGGACTACGAGCGCTTGCGGCTTCATGGGTTACCTCCACTTCGCCGAGCTCATCAGACGAGGCTATGTGCCACTCAAAGACGAGAGTGACCTGACGAACGGATACCTGGACACTCCGATCGACTGGATCCCCGGGATGCGAGGCATCCGTCTCAAGGACGTGCCAAGTTTCATCAGAACGACCGATCCGGACGACGTCATGCTCAATTTCGACGGCGGCGAGGCTCAGAACGCGCGCAAGGCCCGGGGGCTCATCCTCAACACGTACGACGCGCTGGAGCAAGACGTCGTCGACGCGCTGCGCCGCGAGTTCCCGCGTGTGTACACCGTCGGCCCGCTCCCGGCGTTCGCCAAGGCCGCCGCCGGCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACACGGGCTGCCTCCGGTGGCTGGACGCCCAGCAGCCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGTCGCCGGCTCATCTGGCCGAGTTCGCGTGGGGCCTAGCTTGCTGCGGCCGGCCGTTCTTGTGGGTCATCAGGCCGGACCTCGTCTCCGGCGAGAAGGCCA-TGCTGCCGGAGGAGTTCGTCGGCGAGACCAAAGAGAGGGGCGTTCTGGCGAG-TTGGTGCCCGCAAGAGCTCGTCCTCTC-GCACCC-GTCC-GTCGGCCTGTTCCTGACGCACTGCGGGTGGAACTCGACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGCCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGGATGGAGATCGACAGCAACGTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATGGAGGGGGAGAGAGGCAAGGCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAGGAGGCGACAGAGGAAGGAGGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTGCATTCTTCTGGGAGTGACGCTCGCTGAGTTCATATTATCATATCACAAATTATCTTGTGCGTGCTTTCCGCTCATCTAGTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTCAAAATTCCTGTTCGTGTCAGAGTATAACATGGAAGGATACGGAGTTTGCTAGCACAAAACAACTGTGCTGCTGGATGGCGACTTGATCACCAGCTCAATTTCTCCGGGATTCTAGATCGCAAAATGACGGAAAGGGATTCTAGATAGTAGATTCGTCTCGCGGCCCGTGCAGCCGTGCGCTCTAATCAGCCGGCGCTAGCACACTACGCGTCAGCCAAATCTGACGTGGAGGAGTAAAAAGGAAAGAAAAAGGATGGAGTGAGTGTTCCATCTATCGTCCGACTGAAGCGCAATACACGAGAAAAGGCTGCTTTCTTCCAACCAGATACGAGGAGATGAGGTGTATATGCGAATATTAAATATCTAAATCTTCAATAGAGGTAAACAAACAGCTAATCTAACAGCCAGCCTATTATATTAGTGATGGCTATAGGTGACATGGTACTATTATAGAGCCGGCAGCTAGCTATATTATTATCCTTGCTCCGGGTGATCTCCGATACTCGGCCACTACACCAGTGGATACGCACGAGCAGCTAGCAGTGACAGTTTCGACGCACGCGGCTGTGGTAGCGAAGGAACGGCTCGGCCGCTTGGATGGCTACACACACCTGGTGCGGATGCGTACATGCACGGACATCACGGGCTTCTACAGAAAAAGTTACTTTCAAAATTATGAAAAATCCAGCACGTTCCACCCTGGCTGCTATCAACCGGGAGGCTTCGATGATGGAGCGGTGATTGGTTGTTCTTCACTTGTTCTGGGCTTATCCAGCGGAAATTGGTTGATTGCGAACTTCGTGGACTTTAACCAAACTCCATATAAAAGATTCCCTCCGTGGTATACCGTCAGGATAATACAGGTGCATTTTGTATATCTGTTTATCTTTTCTTTCTTTATGTAGGTAAATTGCATCGGTGTATACAAAATTGTCGTATGAATGCAACCTAGTGTACGAACTTGTAAAATACTTGTT]

[+] EMBL AK064105             [GGCCTGACCGCGGCGCCGAGCGTCCGTCCGTCTGCACGCCGGAGGAGAAGACACACGGCGATGAGCTCCTGCGAGGCGAGGCGGGCGCACGCGGTGCTCATCCCGCAGCCGGCGCAGGGCCACGTCACGCCCATGCTGCACCTCGCCAAGGCGCTGCACGCCAGGGGGTTCTTCGTCACCTACGTCAACTCCGAGTACAACCACCGCCGCCTGCTCCGGTCCAGCGGCCCTGGCGCGCTGGCCGGCGCCGCGGGCTTCCGTTTCGAGGCCGTGCCGGACGGCATGCCGGAGTCCGGCAACGACGACGTCACGCAGGACATCGCCGCGCTCTGCGTGTCCACCACCAGGCACAGCGCCGAGCCGTTCAGGGAGCTGTTGGTGAGGCTGAACAGCACGCCCGGGACGCCGCCGGTGAGCTGCGTCATAGCCGACGGCGTGATGAGCTTCGTGCAGAGGGTCGCCGAGGAGATGGGCATCCTGGCCTTGGTGTTCTGGACTACGAGCGCTTGCGGCTTCATGGGTTACCTCCACTTCGCCGAGCTCATCAGACGAGGCTATGTGCCACTCAAAGACGAGAGTGACCTGACGAACGGATACCTGGACACTCCGATCGACTGGATCCCCGGGATGCGAGGCATCCGTCTCAAGGACGTGCCAAGTTTCATCAGAACGACCGATCCGGACGACGTCATGCTCAATTTCGACGGCGGCGAGGCTCAGAACGCGCGCAAGGCCCGGGGGCTCATCCTCAACACGTACGACGCGCTGGAGCAAGACGTCGTCGACGCGCTGCGCCGCGAGTTCCCGCGTGTGTACACCGTCGGCCCGCTCCCGGCGTTCGCCAAGGCCGCCGCCGGCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACACGGGCTGCCTCCGGTGGCTGGACGCCCAGCAGCCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGTCGCCGGCTCATCTGGCCGAGTTCGCGTGGGGCCTAGCTTGCTGCGGCCGGCCGTTCTTGTGGGTCATCAGGCCGGACCTCGTCTCCGGCGAGAAGGCCA TGCTGCCGGAGGAGTTCGTCGGCGAGACCAAAGAGAGGGGCGTTCTGGCGAG TTGGTGCCCGCAAGAGCTCGTCCTCTC GCACCC GTCC GTCGGCCTGTTCCTGACGCACTGCGGGTGGAACTCGACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGCCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGGATGGAGATCGACAGCAACGTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATGGAGGGGGAGAGAGGCAAGGCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAGGAGGCGACAGAGGAAGGAGGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTGCATTCTTCTGGGAGTGACGCTCGCTGAGTTCATATTATCATATCACAAATTATCTTGTGCGTGCTTTCCGCTCATCTAGTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTCAAAATTCCCGTTCGTGTCAGAGTATAACATGGAAGGATACGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK106639             [   CTGACCGCGGCGCCGAGCGTCCGTCCGTCTGCACGCCGGAGGAGAAGACACACGGCGATGAGCTCCTGCGAGGCGAGGCGGGCGCACGCGGTGCTCATCCCGCAGCCGGCGCAGGGCCACGTCACGCCCATGCTGCACCTCGCCAAGGCGCTGCACGCCAGGGGGTTCTTCGTCACCTACGTCAACTCCGAGTACAACCACCGCCGCCTGCTCCGGTCCAGCGGCCCTGGCGCGCTGGCCGGCGCCGCGGGCTTCCGTTTCGAGGCCGTGCCGGACGGCATGCCGGAGTCCGGCAACGACGACGTCACGCAGGACATCGCCGCGCTCTGCGTGTCCACCACCAGGCACAGCGCCGAGCCGTTCAGGGAGCTGTTGGTGAGGCTGAACAGCACGCCCGGGACGCCGCCGGTGAGCTGCGTCATAGCCGACGGCGTGATGAGCTTCGCGCAGAGGGTCGCCGAGGAGATGGGCATCCTGGCCTTGGTGTTCTGGACTACGAGCGCTTGCGGCTTCATGGGTTACCTCCACTTCGCCGAGCTCATCAGACGAGGCTATGTGCCACTCAAAGACGAGAGTGACCTGACGAACGGATACCTGGACACTCCGATCGACTGGATCCCCGGGATGCGAGGCATCCGTCTCAAGGACGTGCCAAGTTTCATCAGAACGACCGATCCGGACGACGTCATGCTCAATTTCGACGGCGGCGAGGCTCAGAACGCGCGCAAGGCCCGGGGGCTCATCCTCAACACGTACGACGCGCTGGAGCAAGACGTCGTCGACGCGCTGCGCCGCGAGTTCCCGCGTGTGTACACCGTCGGCCCGCTCCCGGCGTTCGCCAAGGCCGCCGCCGGCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACACGGGCTGCCTCCGGTGGCTGGACGCCCAGCAGCCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGTCGCCGGCTCATCTGGCCGAGTTCGCGTGGGGCCTAGCTTGCTGCGGCCGGCCGTTCTTGTGGGTCATCAGGCCGGACCCCGTCTCCGGCGAGAAGGCCA TGCTGCCGGAGGAGTTCGTCGGCGAGACCAAAGAGAGGGGCGTTCTGGCGAG TTGGTGCCCGCAAGAGCTCGTCCTCTC GCACCC GTCC GTCGGCCTGTTCCTGACGCACTGCGGGTGGAACTCGACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGCCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGGATGGAGATCGACAGCAACGTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATGGAGGGGGAGAGAGGCAAGGCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAGGAGGCGACAGAGGAAGGAGGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTGCATTCTTCTGGGAGTGACGCTCGCTGAGTTCATATTATCGTATCACAAATTATCTTGTGCGTGCTTTCCGCTCATCTAGTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTCAAAATTCCTGTTCGTGTCAGAGTATAACATGGAAGGATACGGAGTTTGCTAGCACAAAACAACTGTGCTGCTGGATGGCGACTTGATCACCAGCTCAATTTCTCCGGGATTCTAGATCGCAAAATGACGGAAAGGGATTCTAGATAGTAGATTCGTCTCGCGGCCCGTGCAGCCGTGCGCTCTAATCAGCCGGCGCTAGCACACTACGCGTCAGCCAAATCTGACGTGGAGGAGTAAAAAGGAAAGAAAAAGGATGGAGTGAGTGTTCCATCTATCGTCCGACTGAAGCGCAATACACGAGAAAAGGCTGCTTTCTTCCAACCAGATACGAGGAGATGAGGTGTATATGCGAATATTAAATATCTAAATCTTCAATAGAGGTAAACAAACAGCTAATCTAACAGCCAGCCTATTATATTAGTGATGGCTATAGGTGACATGGTACTATTATAGAGCCGGCAGCTAGCTATATTATTATCCTTGCTCCGGGTGATCTCCGATACTCGGCCACTACACCAGTGGATACGCACGAGCAGCTAGCAGTGACAGTTTCGACGCACGCGGCTGTGGTAGCGAAGGAACGGCTCGGCCGCTTGGATGGCTACACACACCTGGTGCGGATGCGTACATGCACGGACATCACGGGCTTCTACAGAAAAAGTTACTTTCAAAATTATGAAAAATCCAGCACGTTCCACCCTGGCTGCTATCAACCGGGAGGCTTCGATGATGGAGCGGTGATTGGTTGTTCTTCACTTGTTCTGGGCTTATCCAGCGGAAATTGGTTGATTGCGAACTTCGTGGACTTTAACCAAACTCCATATAAAAGATTCCCTCCGTGGTATACCGTCAGGATAATACAGGTGCATTTTGTATATCTGTTTATCTTTTCTTTCTTTATGTAGGTAAATTGCATCGGTGTATACAAAATTGTCGTATGAATGCAACCTAGTGTACGAACTTGTAAAATACTTGTT]
[+] EMBL BM418776             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGCGAGAAGCCCATTGCTGCCGGAGGAGTTCGTCGGCGAGACC AAGAGA GGGCGTTCTGGCGAGTTTGGTGCCCGCAAGAGCTCGTCCTCTCGGCACCCGGTCCGGTCGGCCTGTTCCTGACGCACTGCGGGTGGAACTCGACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGCCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGGATGGAGATCGACAGCAACGTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATGGAGGGGGAGAGAGGCAAGGCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAGGAGGCGACAGAGGAAGGAGGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTGCATTCTTCTGGGAGTGACGCTCGCTGAGTTCATATTATCATATCAC AATTATCTTGTGCGTGCTTTCCGCTCATCTAGTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTC AAATTCCTGTTCGTGTCAGAGTTTAACATGGAAGGATACGGAGTTTGCTGGCACAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_6693#0
GGCCTGACCGCGGCGCCGAGCGTCCGTCCGTCTGCACGCCGGAGGAGAAGACACACGGCG
ATGAGCTCCTGCGAGGCGAGGCGGGCGCACGCGGTGCTCATCCCGCAGCCGGCGCAGGGC
CACGTCACGCCCATGCTGCACCTCGCCAAGGCGCTGCACGCCAGGGGGTTCTTCGTCACC
TACGTCAACTCCGAGTACAACCACCGCCGCCTGCTCCGGTCCAGCGGCCCTGGCGCGCTG
GCCGGCGCCGCGGGCTTCCGTTTCGAGGCCGTGCCGGACGGCATGCCGGAGTCCGGCAAC
GACGACGTCACGCAGGACATCGCCGCGCTCTGCGTGTCCACCACCAGGCACAGCGCCGAG
CCGTTCAGGGAGCTGTTGGTGAGGCTGAACAGCACGCCCGGGACGCCGCCGGTGAGCTGC
GTCATAGCCGACGGCGTGATGAGCTTCGTGCAGAGGGTCGCCGAGGAGATGGGCATCCTG
GCCTTGGTGTTCTGGACTACGAGCGCTTGCGGCTTCATGGGTTACCTCCACTTCGCCGAG
CTCATCAGACGAGGCTATGTGCCACTCAAAGACGAGAGTGACCTGACGAACGGATACCTG
GACACTCCGATCGACTGGATCCCCGGGATGCGAGGCATCCGTCTCAAGGACGTGCCAAGT
TTCATCAGAACGACCGATCCGGACGACGTCATGCTCAATTTCGACGGCGGCGAGGCTCAG
AACGCGCGCAAGGCCCGGGGGCTCATCCTCAACACGTACGACGCGCTGGAGCAAGACGTC
GTCGACGCGCTGCGCCGCGAGTTCCCGCGTGTGTACACCGTCGGCCCGCTCCCGGCGTTC
GCCAAGGCCGCCGCCGGCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACACG
GGCTGCCTCCGGTGGCTGGACGCCCAGCAGCCTGGCTCCGTCGTGTACGTCAACTTCGGC
AGCATCACCGTCATGTCGCCGGCTCATCTGGCCGAGTTCGCGTGGGGCCTAGCTTGCTGC
GGCCGGCCGTTCTTGTGGGTCATCAGGCCGGACCTCGTCTCCGGCGAGAAGGCCATGCTG
CCGGAGGAGTTCGTCGGCGAGACCAAAGAGAGGGGCGTTCTGGCGAGTTGGTGCCCGCAA
GAGCTCGTCCTCTCGCACCCGTCCGTCGGCCTGTTCCTGACGCACTGCGGGTGGAACTCG
ACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAG
CCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGGATGGAGATCGACAGCAAC
GTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATGGAGGGGGAGAGAGGCAAG
GCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAGGAGGCGACAGAGGAAGGA
GGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTGCATTCTTCTGGGAGTGAC
GCTCGCTGAGTTCATATTATCATATCACAAATTATCTTGTGCGTGCTTTCCGCTCATCTA
GTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTCAAAATTCCTGTTCGTGTCAGAG
TATAACATGGAAGGATACGGAGTTTGCTAGCACAAAACAACTGTGCTGCTGGATGGCGAC
TTGATCACCAGCTCAATTTCTCCGGGATTCTAGATCGCAAAATGACGGAAAGGGATTCTA
GATAGTAGATTCGTCTCGCGGCCCGTGCAGCCGTGCGCTCTAATCAGCCGGCGCTAGCAC
ACTACGCGTCAGCCAAATCTGACGTGGAGGAGTAAAAAGGAAAGAAAAAGGATGGAGTGA
GTGTTCCATCTATCGTCCGACTGAAGCGCAATACACGAGAAAAGGCTGCTTTCTTCCAAC
CAGATACGAGGAGATGAGGTGTATATGCGAATATTAAATATCTAAATCTTCAATAGAGGT
AAACAAACAGCTAATCTAACAGCCAGCCTATTATATTAGTGATGGCTATAGGTGACATGG
TACTATTATAGAGCCGGCAGCTAGCTATATTATTATCCTTGCTCCGGGTGATCTCCGATA
CTCGGCCACTACACCAGTGGATACGCACGAGCAGCTAGCAGTGACAGTTTCGACGCACGC
GGCTGTGGTAGCGAAGGAACGGCTCGGCCGCTTGGATGGCTACACACACCTGGTGCGGAT
GCGTACATGCACGGACATCACGGGCTTCTACAGAAAAAGTTACTTTCAAAATTATGAAAA
ATCCAGCACGTTCCACCCTGGCTGCTATCAACCGGGAGGCTTCGATGATGGAGCGGTGAT
TGGTTGTTCTTCACTTGTTCTGGGCTTATCCAGCGGAAATTGGTTGATTGCGAACTTCGT
GGACTTTAACCAAACTCCATATAAAAGATTCCCTCCGTGGTATACCGTCAGGATAATACA
GGTGCATTTTGTATATCTGTTTATCTTTTCTTTCTTTATGTAGGTAAATTGCATCGGTGT
ATACAAAATTGTCGTATGAATGCAACCTAGTGTACGAACTTGTAAAATACTTGTT

consensusID : consensus_6693#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1577
fasta sequence 
                              [TATCGCTTGCCATGGGCTCAAACTCGCGCCTGCACGCCGTGCTCATCCCGTACCCGGCGCAGGGCCACGTCACGCCCCTCCTGCACCTCGCCAAGGTGCTCCACTCCAGGGGGTTCCACGTCACCTTCGTCAACTCCGAGTACAACCACCACCGCCTCCTCCGTTCCCGCGGCACCGGCGCGCTGGCCGGCCTCGACGACTTCCGGTTCGAGACCATCCCGGACGGCCTGCCGCCGCCGTCCGAATCCGACAACGACGACGTCACGCAGGACATCCCCACGGTCTGCACGTCCTTCCTCACGCACGGCCCCGCGGCGTTCGGGGCCCTCCTGGCGCGGCTCAACAGCGAGCCCGGGACGCCGCCGGTGAGCTGCGTTATACCGGACGGCGTGATGAGCTTCGCACAGAGAGTGGCCAGCGACATGGGCATCCTTGCCCCGGCGTTCTGGACCACCAGCGCCTGCGGCTTCATGGGATATCTCCACTACGCCGAGCTCATCGACAGAGGCTACGTGCCACTCAAAGATGAGAGCTACCTGACCAACGGATACCTCGACACCGTGCTCGACTGGGTGCCGGGGATGCCAGGCATCCGGCTGCGCGACATGCCCAGCTTCATCCGCACGACCGACCGGGACGAGTTCATGCTCAACTTCGACAGCGGCGAGGCGCAGAACGCGCGCCACGCGCAGGGCCTCATCCTCAACACGTTCGACGCGGTGGAGCACGACGTCGTCGACGCGCTGCGCCGCATCTTCCCGCGCGTGTACACAGTCGGCCCGCTCCTGACGTTCGCGGGGGCCGCAGCGGCGCGGCGCCCCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACGCGAGCTGCCTTCGGTGGCTGGACGCCCAGCAGCCCGGCTCGGTCGTGTACGTCAACTTCGGTAGCATCACCGTCATGTCGCCGGCTCATCTCGCCGAGTTCGCGTGGGGGTTGGCGCGCTGCGGCCGGCCATTCCTGTGGGTCATCAGGCCCGACCTCGTCGCCAGCGAGAAGGCCATGCTGCCGGAAGAGTTCGTCAGCGAGACCAAAGAGAGAGGGATCTTTCTGAGCTGGTGCCCGCAAGAGCAAGTCCTGGAGCATCCGGCGACCGGCCTGTTCTTGACGCATTCCGGCTGGAACTCGACGCTGGAGAGCATAAGCGCCGGCGTGCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGATGACCAACTGCCGCTACGCTTGCACCAAGTGGGACATTGGACTGGAAATTGACACCGACGTGAAGAGGGAGGAGGTGGCACGGCTCGTGCAAGAGGCCATGGATGGAGAGAAAAGCAAGGATATGAGAGCGAAAGCAATGGCGTGGAAGGAGAAAGCCGTGGCGGCAACGGAGGAAGGAGGCACTTCGAGCGCCGGAATAGATCGTTTGGTTGAATTTCTGCTTGCAAGAGGTGATCACGCAAGCTGAATATTGTTGTTGTTGATCAATCCTAAAAATGCGATTTGTAATTGGGTAAATGAATCTATGATGTGACCATCTCCCACTATCTTGTTAGAAATATCAAATATTAGT]

[+] EMBL AK066301             [TATCGCTTGCCATGGGCTCAAACTCGCGCCTGCACGCCGTGCTCATCCCGTACCCGGCGCAGGGCCACGTCACGCCCCTCCTGCACCTCGCCAAGGTGCTCCACTCCAGGGGGTTCCACGTCACCTTCGTCAACTCCGAGTACAACCACCACCGCCTCCTCCGTTCCCGCGGCACCGGCGCGCTGGCCGGCCTCGACGACTTCCGGTTCGAGACCATCCCGGACGGCCTGCCGCCGCCGTCCGAATCCGACAACGACGACGTCACGCAGGACATCCCCACGGTCTGCACGTCCTTCCTCACGCACGGCCCCGCGGCGTTCGGGGCCCTCCTGGCGCGGCTCAACAGCGAGCCCGGGACGCCGCCGGTGAGCTGCGTTATACCGGACGGCGTGATGAGCTTCGCACAGAGAGTGGCCAGCGACATGGGCATCCTTGCCCCGGCGTTCTGGACCACCAGCGCCTGCGGCTTCATGGGATATCTCCACTACGCCGAGCTCATCGACAGAGGCTACGTGCCACTCAAAGATGAGAGCTACCTGACCAACGGATACCTCGACACCGTGCTCGACTGGGTGCCGGGGATGCCAGGCATCCGGCTGCGCGACATGCCCAGCTTCATCCGCACGACCGACCGGGACGAGTTCATGCTCAACTTCGACAGCGGCGAGGCGCAGAACGCGCGCCACGCGCAGGGCCTCATCCTCAACACGTTCGACGCGGTGGAGCACGACGTCGTCGACGCGCTGCGCCGCATCTTCCCGCGCGTGTACACAGTCGGCCCGCTCCTGACGTTCGCGGGGGCCGCAGCGGCGCGGCGCCCCGAGGTGGGCGCGATCGGCGGCAACCTCTGGAAGGAGGACGCGAGCTGCCTTCGGTGGCTGGACGCCCAGCAGCCCGGCTCGGTCGTGTACGTCAACTTCGGTAGCATCACCGTCATGTCGCCGGCTCATCTCGCCGAGTTCGCGTGGGGGTTGGCGCGCTGCGGCCGGCCATTCCTGTGGGTCATCAGGCCCGACCTCGTCGCCAGCGAGAAGGCCATGCTGCCGGAAGAGTTCGTCAGCGAGACCAAAGAGAGAGGGATCTTTCTGAGCTGGTGCCCGCAAGAGCAAGTCCTGGAGCATCCGGCGACCGGCCTGTTCTTGACGCATTCCGGCTGGAACTCGACGCTGGAGAGCATAAGCGCCGGCGTGCCGATGATCTGCTGGCCGTTCTTCGCCGAGCAGATGACCAACTGCCGCTACGCTTGCACCAAGTGGGACATTGGACTGGAAATTGACACCGACGTGAAGAGGGAGGAGGTGGCACGGCTCGTGCAAGAGGCCATGGATGGAGAGAAAAGCAAGGATATGAGAGCGAAAGCAATGGCGTGGAAGGAGAAAGCCGTGGCGGCAACGGAGGAAGGAGGCACTTCGAGCGCCGGAATAGATCGTTTGGTTGAATTTCTGCTTGCAAGAGGTGATCACGCAAGCTGAATATTGTTGTTGTTGATCAATCCTAAAAATGCGATTTGTAATTGGGTAAATGAATCTATGATGTGACCATCTCCCACTATCTTGTTAGAAATATCAAATATTAGT]




>consensus_6693#1
TATCGCTTGCCATGGGCTCAAACTCGCGCCTGCACGCCGTGCTCATCCCGTACCCGGCGC
AGGGCCACGTCACGCCCCTCCTGCACCTCGCCAAGGTGCTCCACTCCAGGGGGTTCCACG
TCACCTTCGTCAACTCCGAGTACAACCACCACCGCCTCCTCCGTTCCCGCGGCACCGGCG
CGCTGGCCGGCCTCGACGACTTCCGGTTCGAGACCATCCCGGACGGCCTGCCGCCGCCGT
CCGAATCCGACAACGACGACGTCACGCAGGACATCCCCACGGTCTGCACGTCCTTCCTCA
CGCACGGCCCCGCGGCGTTCGGGGCCCTCCTGGCGCGGCTCAACAGCGAGCCCGGGACGC
CGCCGGTGAGCTGCGTTATACCGGACGGCGTGATGAGCTTCGCACAGAGAGTGGCCAGCG
ACATGGGCATCCTTGCCCCGGCGTTCTGGACCACCAGCGCCTGCGGCTTCATGGGATATC
TCCACTACGCCGAGCTCATCGACAGAGGCTACGTGCCACTCAAAGATGAGAGCTACCTGA
CCAACGGATACCTCGACACCGTGCTCGACTGGGTGCCGGGGATGCCAGGCATCCGGCTGC
GCGACATGCCCAGCTTCATCCGCACGACCGACCGGGACGAGTTCATGCTCAACTTCGACA
GCGGCGAGGCGCAGAACGCGCGCCACGCGCAGGGCCTCATCCTCAACACGTTCGACGCGG
TGGAGCACGACGTCGTCGACGCGCTGCGCCGCATCTTCCCGCGCGTGTACACAGTCGGCC
CGCTCCTGACGTTCGCGGGGGCCGCAGCGGCGCGGCGCCCCGAGGTGGGCGCGATCGGCG
GCAACCTCTGGAAGGAGGACGCGAGCTGCCTTCGGTGGCTGGACGCCCAGCAGCCCGGCT
CGGTCGTGTACGTCAACTTCGGTAGCATCACCGTCATGTCGCCGGCTCATCTCGCCGAGT
TCGCGTGGGGGTTGGCGCGCTGCGGCCGGCCATTCCTGTGGGTCATCAGGCCCGACCTCG
TCGCCAGCGAGAAGGCCATGCTGCCGGAAGAGTTCGTCAGCGAGACCAAAGAGAGAGGGA
TCTTTCTGAGCTGGTGCCCGCAAGAGCAAGTCCTGGAGCATCCGGCGACCGGCCTGTTCT
TGACGCATTCCGGCTGGAACTCGACGCTGGAGAGCATAAGCGCCGGCGTGCCGATGATCT
GCTGGCCGTTCTTCGCCGAGCAGATGACCAACTGCCGCTACGCTTGCACCAAGTGGGACA
TTGGACTGGAAATTGACACCGACGTGAAGAGGGAGGAGGTGGCACGGCTCGTGCAAGAGG
CCATGGATGGAGAGAAAAGCAAGGATATGAGAGCGAAAGCAATGGCGTGGAAGGAGAAAG
CCGTGGCGGCAACGGAGGAAGGAGGCACTTCGAGCGCCGGAATAGATCGTTTGGTTGAAT
TTCTGCTTGCAAGAGGTGATCACGCAAGCTGAATATTGTTGTTGTTGATCAATCCTAAAA
ATGCGATTTGTAATTGGGTAAATGAATCTATGATGTGACCATCTCCCACTATCTTGTTAG
AAATATCAAATATTAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6693#0      GGCCTGACCGCGGCGCCGAGCGTCCGTCCGTCTGCACGCCGGAGGAGAAGACACACGGCG 60
consensus_6693#1      -------------------------------------------------TATCGCTTGCC 11
                                                                        *      ** 

consensus_6693#0      ATGAGCTCCTGCGAGGCGAGGCGGGCGCACGCGGTGCTCATCCCGCAGCCGGCGCAGGGC 120
consensus_6693#1      ATGGGCTCAAACTC------GCGCCTGCACGCCGTGCTCATCCCGTACCCGGCGCAGGGC 65
                      *** ****   *        ***   ****** ************ * ************

consensus_6693#0      CACGTCACGCCCATGCTGCACCTCGCCAAGGCGCTGCACGCCAGGGGGTTCTTCGTCACC 180
consensus_6693#1      CACGTCACGCCCCTCCTGCACCTCGCCAAGGTGCTCCACTCCAGGGGGTTCCACGTCACC 125
                      ************ * **************** *** *** ***********  *******

consensus_6693#0      TACGTCAACTCCGAGTACAACCACCGCCGCCTGCTCCGGTCCAGCGGCCCTGGCGCGCTG 240
consensus_6693#1      TTCGTCAACTCCGAGTACAACCACCACCGCCTCCTCCGTTCCCGCGGCACCGGCGCGCTG 185
                      * *********************** ****** ***** *** ***** * *********

consensus_6693#0      GCCGGCGCCGCGGGCTTCCGTTTCGAGGCCGTGCCGGACGGCATGCCG---------GAG 291
consensus_6693#1      GCCGGCCTCGACGACTTCCGGTTCGAGACCATCCCGGACGGCCTGCCGCCGCCGTCCGAA 245
                      ******  **  * ****** ****** ** * ********* *****         ** 

consensus_6693#0      TCCGGCAACGACGACGTCACGCAGGACATCGCCGCGCTCTGCGTGTCCACCACCAGGCAC 351
consensus_6693#1      TCCGACAACGACGACGTCACGCAGGACATCCCCACGGTCTGCACGTCCTTCCTCACGCAC 305
                      **** ************************* ** ** *****  ****  *  ** ****

consensus_6693#0      AGCGCCGAGCCGTTCAGGGAGCTGTTGGTGAGGCTGAACAGCACGCCCGGGACGCCGCCG 411
consensus_6693#1      GGCCCCGCGGCGTTCGGGGCCCTCCTGGCGCGGCTCAACAGCGAGCCCGGGACGCCGCCG 365
                       ** *** * ***** ***  **  *** * **** ******  ****************

consensus_6693#0      GTGAGCTGCGTCATAGCCGACGGCGTGATGAGCTTCGTGCAGAGGGTCGCCGAGGAGATG 471
consensus_6693#1      GTGAGCTGCGTTATACCGGACGGCGTGATGAGCTTCGCACAGAGAGTGGCCAGCGACATG 425
                      *********** *** * *******************  ***** ** ***   ** ***

consensus_6693#0      GGCATCCTGGCCTTGGTGTTCTGGACTACGAGCGCTTGCGGCTTCATGGGTTACCTCCAC 531
consensus_6693#1      GGCATCCTTGCCCCGGCGTTCTGGACCACCAGCGCCTGCGGCTTCATGGGATATCTCCAC 485
                      ******** ***  ** ********* ** ***** ************** ** ******

consensus_6693#0      TTCGCCGAGCTCATCAGACGAGGCTATGTGCCACTCAAAGACGAGAGTGACCTGACGAAC 591
consensus_6693#1      TACGCCGAGCTCATCGACAGAGGCTACGTGCCACTCAAAGATGAGAGCTACCTGACCAAC 545
                      * *************    ******* ************** *****  ******* ***

consensus_6693#0      GGATACCTGGACACTCCGATCGACTGGATCCCCGGGATGCGAGGCATCCGTCTCAAGGAC 651
consensus_6693#1      GGATACCTCGACACCGTGCTCGACTGGGTGCCGGGGATGCCAGGCATCCGGCTGCGCGAC 605
                      ******** *****   * ******** * ** ******* ********* **    ***

consensus_6693#0      GTGCCAAGTTTCATCAGAACGACCGATCCGGACGACGTCATGCTCAATTTCGACGGCGGC 711
consensus_6693#1      ATGCCCAGCTTCATCCGCACGACCGACCGGGACGAGTTCATGCTCAACTTCGACAGCGGC 665
                       **** ** ****** * ******** * ******  ********** ****** *****

consensus_6693#0      GAGGCTCAGAACGCGCGCAAGGCCCGGGGGCTCATCCTCAACACGTACGACGCGCTGGAG 771
consensus_6693#1      GAGGCGCAGAACGCGCGCCACGCGCAGGGCCTCATCCTCAACACGTTCGACGCGGTGGAG 725
                      ***** ************ * ** * *** **************** ******* *****

consensus_6693#0      CAAGACGTCGTCGACGCGCTGCGCCGCGAGTTCCCGCGTGTGTACACCGTCGGCCCGCTC 831
consensus_6693#1      CACGACGTCGTCGACGCGCTGCGCCGCATCTTCCCGCGCGTGTACACAGTCGGCCCGCTC 785
                      ** ************************   ******** ******** ************

consensus_6693#0      CCGGCGTTCGCCAAGGCCGCCGC----CGGCG-----AGGTGGGCGCGATCGGCGGCAAC 882
consensus_6693#1      CTGACGTTCGCGGGGGCCGCAGCGGCGCGGCGCCCCGAGGTGGGCGCGATCGGCGGCAAC 845
                      * * *******   ****** **    *****     ***********************

consensus_6693#0      CTCTGGAAGGAGGACACGGGCTGCCTCCGGTGGCTGGACGCCCAGCAGCCTGGCTCCGTC 942
consensus_6693#1      CTCTGGAAGGAGGACGCGAGCTGCCTTCGGTGGCTGGACGCCCAGCAGCCCGGCTCGGTC 905
                      *************** ** ******* *********************** ***** ***

consensus_6693#0      GTGTACGTCAACTTCGGCAGCATCACCGTCATGTCGCCGGCTCATCTGGCCGAGTTCGCG 1002
consensus_6693#1      GTGTACGTCAACTTCGGTAGCATCACCGTCATGTCGCCGGCTCATCTCGCCGAGTTCGCG 965
                      ***************** ***************************** ************

consensus_6693#0      TGGGGCCTAGCTTGCTGCGGCCGGCCGTTCTTGTGGGTCATCAGGCCGGACCTCGTCTCC 1062
consensus_6693#1      TGGGGGTTGGCGCGCTGCGGCCGGCCATTCCTGTGGGTCATCAGGCCCGACCTCGTCGCC 1025
                      *****  * **  ************* *** **************** ********* **

consensus_6693#0      GGCGAGAAGGCCATGCTGCCGGAGGAGTTCGTCGGCGAGACCAAAGAGAGGGGCGTTCTG 1122
consensus_6693#1      AGCGAGAAGGCCATGCTGCCGGAAGAGTTCGTCAGCGAGACCAAAGAGAGAGGGATCTTT 1085
                       ********************** ********* **************** **  *  * 

consensus_6693#0      GCGAGTTGGTGCCCGCAAGAGCTCGTCCTCTCGCACCCGTCCGTCGGCCTGTTCCTGACG 1182
consensus_6693#1      CTGAGCTGGTGCCCGCAAGAGCAAGTCCTGGAGCATCCGGCGACCGGCCTGTTCTTGACG 1145
                        *** ****************  *****   *** *** *   ********** *****

consensus_6693#0      CACTGCGGGTGGAACTCGACGCTGGAGAGCATATGCGCCGGCGTTCCGATGATCTGCTGG 1242
consensus_6693#1      CATTCCGGCTGGAACTCGACGCTGGAGAGCATAAGCGCCGGCGTGCCGATGATCTGCTGG 1205
                      ** * *** ************************ ********** ***************

consensus_6693#0      CCGTTCTTCGCCGAGCAGCCGACGAACTGCCGGTACGTGTGCGACAAGTGGGGGGTTGGG 1302
consensus_6693#1      CCGTTCTTCGCCGAGCAGATGACCAACTGCCGCTACGCTTGCACCAAGTGGGACATTGGA 1265
                      ******************  *** ******** ****  ***  ********   **** 

consensus_6693#0      ATGGAGATCGACAGCAACGTGAGCAGAACGGAGGTGGCGCGGCTCGTGCGCGAGGCGATG 1362
consensus_6693#1      CTGGAAATTGACACCGACGTGAAGAGGGAGGAGGTGGCACGGCTCGTGCAAGAGGCCATG 1325
                       **** ** **** * ******  **   ********* **********  ***** ***

consensus_6693#0      GAGGGGGAGAGAGGCAAGGCCATGCGAGTGAACGCCATGGTGTGGAAGGAGAAAGCCAAG 1422
consensus_6693#1      GATGGAGAGAAAAGCAAGGATATGAGAGCGAAAGCAATGGCGTGGAAGGAGAAAGCCGTG 1385
                      ** ** **** * ******  *** *** *** ** **** ****************  *

consensus_6693#0      GAGGCGACAGAGGAAGGAGGTTCGTCGAGCAGAAATCTGGACCGTCTGATCGAATTCTTG 1482
consensus_6693#1      GCGGCAACGGAGGAAGGAGGCACTTCGAGCGCCGGAATAGATCGTTTGGTTGAATTTCTG 1445
                      * *** ** ***********  * ******       * ** *** ** * *****  **

consensus_6693#0      CATTCTTCTGGGAGTGACGCTCGCTGAGTTCATATTATCATATCACAAATTATCTTGTGC 1542
consensus_6693#1      CTTGCAAGAGGTGATCACGCAAGCTGA----ATATTGTTGT-TGTTGATCAATCCTAAAA 1500
                      * * *    **   * ****  *****    ***** *  * *    *   *** *    

consensus_6693#0      GTGCTTTCCGCTCATCTAGTGGCACTGAGAAATGCAGTGCAAATAATTGGTCAGTCAAAA 1602
consensus_6693#1      ATGCGATTTG-TAATTGGGTA--AATGA-ATCTATGATGTGACCATCT---CCCACTATC 1553
                       ***  *  * * **   **   * *** *  *    **  *  *  *   *   * *  

consensus_6693#0      TTCCTGTTCGTGTCAGAGTATAACATGGAAGGATACGGAGTTTGCTAGCACAAAACAACT 1662
consensus_6693#1      TTGTTAGAAATATCAAATATTAGT------------------------------------ 1577
                      **  *     * *** *   **                                      

consensus_6693#0      GTGCTGCTGGATGGCGACTTGATCACCAGCTCAATTTCTCCGGGATTCTAGATCGCAAAA 1722
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TGACGGAAAGGGATTCTAGATAGTAGATTCGTCTCGCGGCCCGTGCAGCCGTGCGCTCTA 1782
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      ATCAGCCGGCGCTAGCACACTACGCGTCAGCCAAATCTGACGTGGAGGAGTAAAAAGGAA 1842
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      AGAAAAAGGATGGAGTGAGTGTTCCATCTATCGTCCGACTGAAGCGCAATACACGAGAAA 1902
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      AGGCTGCTTTCTTCCAACCAGATACGAGGAGATGAGGTGTATATGCGAATATTAAATATC 1962
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TAAATCTTCAATAGAGGTAAACAAACAGCTAATCTAACAGCCAGCCTATTATATTAGTGA 2022
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TGGCTATAGGTGACATGGTACTATTATAGAGCCGGCAGCTAGCTATATTATTATCCTTGC 2082
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TCCGGGTGATCTCCGATACTCGGCCACTACACCAGTGGATACGCACGAGCAGCTAGCAGT 2142
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      GACAGTTTCGACGCACGCGGCTGTGGTAGCGAAGGAACGGCTCGGCCGCTTGGATGGCTA 2202
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      CACACACCTGGTGCGGATGCGTACATGCACGGACATCACGGGCTTCTACAGAAAAAGTTA 2262
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      CTTTCAAAATTATGAAAAATCCAGCACGTTCCACCCTGGCTGCTATCAACCGGGAGGCTT 2322
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      CGATGATGGAGCGGTGATTGGTTGTTCTTCACTTGTTCTGGGCTTATCCAGCGGAAATTG 2382
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      GTTGATTGCGAACTTCGTGGACTTTAACCAAACTCCATATAAAAGATTCCCTCCGTGGTA 2442
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TACCGTCAGGATAATACAGGTGCATTTTGTATATCTGTTTATCTTTTCTTTCTTTATGTA 2502
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      GGTAAATTGCATCGGTGTATACAAAATTGTCGTATGAATGCAACCTAGTGTACGAACTTG 2562
consensus_6693#1      ------------------------------------------------------------
                                                                                  

consensus_6693#0      TAAAATACTTGTT 2575
consensus_6693#1      -------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)