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Oryza sativa
cluster # 6710 cluster # 6710       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6710#0 length = 964 sequences # 4  

consensusID : consensus_6710#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 964
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTATTTGCAATTATAAATTTATAATCACACAATATATCTGATTGTTCAAGCAAAAGGGACAAAAGACTACTAACATTACTTTCGAATGATGTACAGATGAATTCCTGGTCACAGTTCTAAAGCTAGGCCTCTTGTACCCCAAAGGCCTTCTGGATTTCAGCTATGACTCGGTCTGCGACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCGACCTCGATTGACTTGGACCTTACAATTTGGTCCCTCTTTATCATGTTTTCTCTCTCGCCTTCTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAAGAAGTGCCCTAGCAGCTGTTGCTAGTTGACCACGCACTATCTCTTCCAAGGTACCCTCTCCTCCTTGCCCACAGTCGATGCTCATCAGTATTGCTGTCAGTGAGAAGGTGCTGCGCACGAAGAGGGATCGCGATCGGTATGGACGGGCCTGCGGCAATTCTTCGACCTTCTCACGCTGTTTGTCCACCTGAGTATTCTCATAGTATCTCTCTATGTATTCGGGATGGAGCGCAAGGTCTTTCCGTGGGAGAAGGTCCAGAAGCACCACGATCGAAGTTGGGCTACCTTGTATAAATTCCATGAGGAAATGCGGAGCATCTGTCGAGGCGTTCAGAAAGATGAGAAGAGATGTAATGTCGATTGCGCCATTTGGGACTTTGCAGTGTAGTGAGGACTGGAGCATGAAATCAATCGTCGATCCCGGCGCGCCGCGGCGCACGTCGAGCGAGCCCACGGCGTTCCCGGCGCCGCCGCCGCTGCGGAACTCGGCGACGTCGGGCGGCACGGCGGAGGGGAGCAGCCGCGCGCCCAGCCGCGCCTCCGCCAGGGACGCGAGCGCCCGCGCCACCTCCCGGTGCGCCACCTCCACCATCACCTCCGGCTCCGTCGCGCCCGG]

[-] EMBL AU173926             [TTTTTTTTTTTTTTTTTTTTTTATTGGCAATTATAAATTTATAATCACACAATATATCTGATTGTTCAAGCAAAAGGGACAAAAGACTACTAACATTACTTTCGAATGATGTACAGATGAATTCCTGGTCACAGTTCTAAAGCTAGGCCTNTTGTACCCCAAAGGCCTTCTGGATTTCAGCTATGACTCGGTCTGCGACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCGACCTCGATTGACTTGGACCTTACAATTTGGNCCCTCTTTATCATGTTTTCTCTCTCGCCTTCTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAANAAGTGCCCTAGCAGCTGTTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BM421579             [               TTTTGGTA TTG AATTATAAATTTATAATCACACAATATATCTGA TGTTCAAGCAAAAGGGACAAAAGACTACTAACATTACTTTCGAATGATGTACAGATGAATTCCTGGTCACAGTTCTAAAGCTAGG CTCTTGTACCCCAAAGGCCTTCTGGATTTCAGCTATGACTCGGTCTG GACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCGACCTCGATGGACTTGGACCTTACAATTGGGTCCCTCTTTATCATGTTTTCTCTCTCGCCTTCTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAAGAAGTGCCCTAGCAGCTGTCGCTAGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB655594             [                      ATTTGCAATTATAAATTTATAATCACACAATATATCTGATTGTTCAAGCAAAAGGGACAAAAGACTACTAACATTACTTTCGAATGATGTACAGATGAATTCCTGGTCACAGTTCTAAAGCTAGGCCTCTTGTACCCCAAAGGCCTTCTGGATTTCAGCTATGACTCGGTCTGCGACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCGACCTCGATTGACTTGGACCTTACAATTTGGTCCCTCTTTATCATGTTTTCTCTCTCGCCTTCTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAAGAAGTGCCCTAGCAGCTGTTGCTAGTTGACCACGCACTATCTCTTCCAAGGTACCCTCTCCTCCTTGCCCACAGTCGATGCTCATCAGTATTGCTGTCAGTGAGAAGGTGCTGCGCACGAAGAGGGATCGCGATCGGTATGGACGGGCCTGCGGCAATTCTTCGACCTTCTCACGCTGTTTGTCCACCTGAGTATTCTCATAGTATCTCTCTATGTATTCGGGATGGAGCGCAAGGTCTTTCCGTGGGAGAAGGTCCAGAAGCACCACGATCGAAGTTGGGCTACCTTGTATAAATTCCATGAGGAAATGCGGAGCATCTGTCGAGGCGTTCAGAAAGATGAGAAGAGATGTAATGTCGATTGCGCCATTTGGGACTTTGCAGTGTAGTGAGGACTGGAGCATGAAATCAATCGTCGATCCCGGCGCGCCG                                                                                                                                                                                         ]
[-] EMBL CB655593             [                                                                                                                                                                                                                                                                                                                                                                                 CTAGTTGACCACGCACTATCTCTTCCAAGGTACCCTCTCCTCCTTGCCCACAGTCGATGCTCATCAGTATTGCTGTCAGTGAGAAGGTGCTGCGCACGAAGAGGGATCGCGATCGGTATGGACGGGCCTGCGGCAATTCTTCGACCTTCTCACGCTGTTTGTCCACCTGAGTATTCTCATAGTATCTCTCTATGTATTCGGGATGGAGCGCAAGGTCTTTCCGTGGGAGAAGGTCCAGAAGCACCACGATCGAAGTTGGGCTACCTTGTATAAATTCCATGAGGAAATGCGGAGCATCTGTCGAGGCGTTCAGAAAGATGAGAAGAGATGTAATGTCGATTGCGCCATTTGGGACTTTGCAGTGTAGTGAGGACTGGAGCATGAAATCAATCGTCGATCCCGGCGCGCCGCGGCGCACGTCGAGCGAGCCCACGGCGTTCCCGGCGCCGCCGCCGCTGCGGAACTCGGCGACGTCGGGCGGCACGGCGGAGGGGAGCAGCCGCGCGCCCAGCCGCGCCTCCGCCAGGGACGCGAGCGCCCGCGCCACCTCCCGGTGCGCCACCTCCACCATCACCTCCGGCTCCGTCGCGCCCGG]


>consensus_6710#0 TTTTTTTTTTTTTTTTTTTTTTATTTGCAATTATAAATTTATAATCACACAATATATCTG ATTGTTCAAGCAAAAGGGACAAAAGACTACTAACATTACTTTCGAATGATGTACAGATGA ATTCCTGGTCACAGTTCTAAAGCTAGGCCTCTTGTACCCCAAAGGCCTTCTGGATTTCAG CTATGACTCGGTCTGCGACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCGA CCTCGATTGACTTGGACCTTACAATTTGGTCCCTCTTTATCATGTTTTCTCTCTCGCCTT CTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAAGAAGTGCCCTAG CAGCTGTTGCTAGTTGACCACGCACTATCTCTTCCAAGGTACCCTCTCCTCCTTGCCCAC AGTCGATGCTCATCAGTATTGCTGTCAGTGAGAAGGTGCTGCGCACGAAGAGGGATCGCG ATCGGTATGGACGGGCCTGCGGCAATTCTTCGACCTTCTCACGCTGTTTGTCCACCTGAG TATTCTCATAGTATCTCTCTATGTATTCGGGATGGAGCGCAAGGTCTTTCCGTGGGAGAA GGTCCAGAAGCACCACGATCGAAGTTGGGCTACCTTGTATAAATTCCATGAGGAAATGCG GAGCATCTGTCGAGGCGTTCAGAAAGATGAGAAGAGATGTAATGTCGATTGCGCCATTTG GGACTTTGCAGTGTAGTGAGGACTGGAGCATGAAATCAATCGTCGATCCCGGCGCGCCGC GGCGCACGTCGAGCGAGCCCACGGCGTTCCCGGCGCCGCCGCCGCTGCGGAACTCGGCGA CGTCGGGCGGCACGGCGGAGGGGAGCAGCCGCGCGCCCAGCCGCGCCTCCGCCAGGGACG CGAGCGCCCGCGCCACCTCCCGGTGCGCCACCTCCACCATCACCTCCGGCTCCGTCGCGC CCGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)