cluster # 6720

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Oryza sativa
cluster # 6720 cluster # 6720 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6720#0 length = 2531 sequences # 4
consensusID : consensus_6720#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2531
fasta sequence
                              [CTGCCCACCGCCGCCGCCGTCACCACCGGGCGCGGCCGCCGCCACCATGAGAGCCCTCATCTCCCTCTCCAAGCTCACCCGCCGCCTCCTCCCCTCCCTCGCCGTCGCCCGCGCCCCACTCCCGCCCCTCCGCCGCTGCCTCCACGCGGAACCCCCACCGCCTCCTCATCACGCGCCGCCCCCCGTCGCCTCCCGGATCCTACAGTCCGAGCTGACCCCGGGCGCGGGCGCGGACGCGGACGCGGAGCAAGAACAGCAGCCGGCCCCCGACCCCTTGCTCGACGAGTTCCTCGCGCGCTTCGTCGCCGCGCTGCGGCCGACCCTCGCCGCGGCGTTCCCCACCCATGCCCGCCACGTGCTCGACGAGATGCTCCGCCTCGTGGCGGAGGCCGTCCTGTGCCGCCTCACCGGGGTCGAGCCGGAGGAGGGCGGCGCCGTCGAGCTCAGCGACGACCTCTGGGCGGCGGTGTGGGAGGTCAGCGCCGCCGTGCGCGACGGGATGCAGCGGGACCGGGTCCGCGCCGAGCTCCGGGGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATCCGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTCGAGTTCTACCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAACCCTGTCGCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAGATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAGGCTGAAGCGCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAGAAGGCTGAGGAGAAGCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATGGAAGAGTGGAAGGAGGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGTCTTAAAGCCCGCAATGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAATCCTTTGGTGCAACCATTCGTGATTACTCTAAGTTAATCGATCTTCACTCTAAAGCAAATCATGTGGAAGACGCAGAAAGGATTCTAGGTAAAATGAAAGAGAATGGTATTGCACCTGATGTCGTCACATCCATCACTTTAGTCCACATGTATTGCAAGGTGGGGAATCTTGAACAAGCCAATCAGGCATTTCAATTCCTTAAGGGGGAAGGCTTCCCACCAGATATGAAGCTTTTCACGTCAATGATCAGAGCTCATCTTAAGTCTGGAGAACCAAAACAAGCAGAAAATTTGTTACGTGAAATGGAGAGATCGATCAAACCCACAAAGGAACTATTCATGGATGTAATCCTGGCATTTGCTCAGCGTGGCATGATAGATGGAGCCGAAAGGGTGAAAACATCGATGTTACTTGCTGGATTCCAGCTCACGCCAGAGTTATACACATCACTTATAGAAGCATATGGACGGGGTGGTCACGTTGGCCAAGCATATACCCTGTTTGAGCAGATGAGGAGTTCTGGACATGAACCAGATGATCGTTGCGTTGCTGGTATGATGGTTGCCTACATGATGAAGAACCAACTGGACCACGCTCTGAGCTTCCTGTTGAAGTTAGAGAAGGATGGACTTAAACCTGGAGTTAAAACAAACCTTGTCTTGCTGGATTGGTTGTCTAGGTTGCAGCTAGTGCAGGAGGCTGAACAAGTTGTGCAGAAGATTAGAAAGGCTGGAGAGGAACCCCTGGAAATGCATGTTTTCCTTGCTGATATGTACGCAAAGTCACAACAGGAAGAGAGAACCCGCAAATCCCTCAAGATTTTAGAGGAGAAGAAGAAATTATTGAAGGCTTATCATTTTGAGAGGATTATAGCAGGCCTTCTCGAAGGGGGTTTCACGGAAGAAGCCAATAAATATTTCAAAATGATGAAATCCCATGGCTTTGTTCCATCACCAACAATTGAGATTGGGGTCAAGGCTAGTTTTGGGGTTAGGGGGGGTGTTCATCCAACTGGTAGGCATCGTGGTTAAGGCTTTGTCCGTTGGCAGTGATCAGCTGCCATTCAGGCACTGATTCTGGTTTGAAAATCTTGAAGTAGCACTGACGACGCCATAGCCAATTCTGTC-AACTGAAGCGGCAAAAAAAATTTCCGGCTTCAATTGGTTTTGTTTGATCTGATATCAGATGTCTTCATTTTGAAGATGCCTCCATGAACTATGGATTCATACAAGTAGATGGCCGCTTGTCCTGTTATTGCCGGGATTTTTTTTCCTCATCAATTGTACTTGCATGCTCACACTTAATAAGTCTTTTAGTCACTGTAACGCCTGGATATCTAGGTTGTGCTTGTGCCAACAATCGGATTTATCTTAGCAAATATCAGTTATGACTTACCTGTCATAGGCATTTGTCACCAAATAAATGTTTACATTTTAATGAACAATGAAATTATATCACACTGTC]

[+] EMBL AK101310             [CTGCCCACCGCCGCCGCCGTCACCACCGGGCGCGGCCGCCGCCACCATGAGAGCCCTCATCTCCCTCTCCAAGCTCACCCGCCGCCTCCTCCCCTCCCTCGCCGTCGCCCGCGCCCCACTCCCGCCCCTCCGCCGCTGCCTCCACGCGGAACCCCCACCGCCTCCTCATCACGCGCCGCCCCCCGTCGCCTCCCGGATCCTACAGTCCGAGCTGACCCCGGGCGCGGGCGCGGACGCGGACGCGGAGCAAGAACAGCAGCCGGCCCCCGACCCCTTGCTCGACGAGTTCCTCGCGCGCTTCGTCGCCGCGCTGCGGCCGACCCTCGCCGCGGCGTTCCCCACCCATGCCCGCCACGTGCTCGACGAGATGCTCCGCCTCGTGGCGGAGGCCGTCCTGTGCCGCCTCACCGGGGTCGAGCCGGAGGAGGGCGGCGCCGTCGAGCTCAGCGACGACCTCTGGGCGGCGGTGTGGGAGGTCAGCGCCGCCGTGCGCGACGGGATGCAGCGGGACCGGGTCCGCGCCGAGCTCCGGGGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATCCGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTCGAGTTCTACCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAACCCTGTCGCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAGATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAGGCTGAAGCGCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAGAAGGCTGAGGAGAAGCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATGGAAGAGTGGAAGGAGGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGTCTTAAAGCCCGCAATGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAATCCTTTGGTGCAACCATTCGTGATTACTCTAAGTTAATCGATCTTCACTCTAAAGCAAATCATGTGGAAGACGCAGAAAGGATTCTAGGTAAAATGAAAGAGAATGGTATTGCACCTGATGTCGTCACATCCATCACTTTAGTCCACATGTATTGCAAGGTGGGGAATCTTGAACAAGCCAATCAGGCATTTCAATTCCTTAAGGGGGAAGGCTTCCCACCAGATATGAAGCTTTTCACGTCAATGATCAGAGCTCATCTTAAGTCTGGAGAACCAAAACAAGCAGAAAATTTGTTACGTGAAATGGAGAGATCGATCAAACCCACAAAGGAACTATTCATGGATGTAATCCTGGCATTTGCTCAGCGTGGCATGATAGATGGAGCCGAAAGGGTGAAAACATCGATGTTACTTGCTGGATTCCAGCTCACGCCAGAGTTATACACATCACTTATAGAAGCATATGGACGGGGTGGTCACGTTGGCCAAGCATATACCCTGTTTGAGCAGATGAGGAGTTCTGGACATGAACCAGATGATCGTTGCGTTGCTGGTATGATGGTTGCCTACATGATGAAGAACCAACTGGACCACGCTCTGAGCTTCCTGTTGAAGTTAGAGAAGGATGGACTTAAACCTGGAGTTAAAACAAACCTTGTCTTGCTGGATTGGTTGTCTAGGTTGCAGCTAGTGCAGGAGGCTGAACAAGTTGTGCAGAAGATTAGAAAGGCTGGAGAGGAACCCCTGGAAATGCATGTTTTCCTTGCTGATATGTACGCAAAGTCACAACAGGAAGAGAGAACCCGCAAATCCCTCAAGATTTTAGAGGAGAAGAAGAAATTATTGAAGGCTTATCATTTTGAGAGGATTATAGCAGGCCTTCTCGAAGGGGGTTTCACGGAAGAAGCCAATAAATATTTCAAAATGATGAAATCCCATGGCTTTGTTCCATCACCAACAATTGAGATTGGGGTCAAGGCTAGTTTTGGGGTTAGGGGGGGTGTTCATCCAACTGGTAGGCATCGTGGTTAAGGCTTTGTCCGTTGGCAGTGATCAGCTGCCATTCAGGCACTGATTCTGGTTTGAAAATCTTGAAGTAGCACTGACGACGCCATAGCCAATTCTGTC AACTGAAGCGGCAAAAAAAATTTCCGGCTTCAATTGGTTTTGTTTGATCTGATATCAGATGTCTTCATTTTGAAGATGCCTCCATGAACTATGGATTCATACAAGTAGATGGCCGCTTGTCCTGTTATTGCCGGGATTTTTTTTCCTCATCAATTGTACTTGCATGCTCACACTTAATAAGTCTTTTAGTCACTGTAACGCCTGGATATCTAGGTTGTGCTTGTGCCAACAATCGGATTTATCTTAGCAAATATCAGTTATGACTTACCTGTCATAGGCATTTGTCACCAAATAAATGTTTACATTTTAATGAACAATGAAATTATATCACACTGTC]
[+] EMBL CB640133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCGGGACCGGGTCCGCGCCGAGCTCCGGGGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATCCGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTCGAGTTCTACCGGGGCCTCGACGACATGCTCGCCCAGGCCGAGGCGGCCGCTAACCCTGTCGCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAGATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAGGCTGAAGCGCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAGAAGGCTGAGGAGAAGCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATGGAAGAGTGGAAGGAGGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGTCTTAAAGCCCGCAATGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAATCCTTTGGTGCAACCATTCGTGATTACTCTAAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB640124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCGGGACCGGGTCCGCGCCGAGCTCCGGGGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATCCGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTCGAGTTCTACCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAACCCTGTCGCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAGATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAGGCTGAAGCGCATTTTGTGCCACAGGAGGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI813704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACAATTGAGATTTGGGTCAAGGCTA TTTT GGGTTA GCGGGGTGTTCATCCAACTGGTAGGCATCGTGGTTAAGGCTTTGTCCGTTGGCAGTGATCAGCTGCCATTCAGGCACTGATTCTGGTTTGAAAATCTTGAAGTAGCACTGACGACGCCATAGCC ATTCTGTCGAACCGAAGCGGCAAAAAAAATTTCCGGCTTCAATTGGTTTTGTTTGATCTGATATCAGATGTCTTCATTTTGAAGATGCCTCCATGAACTATGGATTCATACAAGTAGATGGCCGCGTGTCCTGTTATTGCCGGGATTTTTTTTCCTCATCAATTGTACTTGCATGCTCACACTTAATAAGTCTTTTAGTCACTGTAACGCCTGGATATCTAGGCTGTGCTTGTGCCAACAATCGGATTTATCTTAGCAAATATCAGTTATGACTTCCCTGTCATAGGCATTTGTCACCAAATAAATGTTTACATTTTAATGAACAATGAAATTAaaaaaaaaa   ]




>consensus_6720#0
CTGCCCACCGCCGCCGCCGTCACCACCGGGCGCGGCCGCCGCCACCATGAGAGCCCTCAT
CTCCCTCTCCAAGCTCACCCGCCGCCTCCTCCCCTCCCTCGCCGTCGCCCGCGCCCCACT
CCCGCCCCTCCGCCGCTGCCTCCACGCGGAACCCCCACCGCCTCCTCATCACGCGCCGCC
CCCCGTCGCCTCCCGGATCCTACAGTCCGAGCTGACCCCGGGCGCGGGCGCGGACGCGGA
CGCGGAGCAAGAACAGCAGCCGGCCCCCGACCCCTTGCTCGACGAGTTCCTCGCGCGCTT
CGTCGCCGCGCTGCGGCCGACCCTCGCCGCGGCGTTCCCCACCCATGCCCGCCACGTGCT
CGACGAGATGCTCCGCCTCGTGGCGGAGGCCGTCCTGTGCCGCCTCACCGGGGTCGAGCC
GGAGGAGGGCGGCGCCGTCGAGCTCAGCGACGACCTCTGGGCGGCGGTGTGGGAGGTCAG
CGCCGCCGTGCGCGACGGGATGCAGCGGGACCGGGTCCGCGCCGAGCTCCGGGGCTACCT
CCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATCCGCGGCGA
GATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTCGAGTTCTA
CCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAACCCTGTCGCGCTCCC
GCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAGATACATGG
GTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAGGCTGAAGC
GCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAGAAGGCTGAGGAGAA
GCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATGGAAGAGTGGAAGGA
GGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGTCTTAAAGCCCGCAA
TGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAATCCTTTGGTGCAAC
CATTCGTGATTACTCTAAGTTAATCGATCTTCACTCTAAAGCAAATCATGTGGAAGACGC
AGAAAGGATTCTAGGTAAAATGAAAGAGAATGGTATTGCACCTGATGTCGTCACATCCAT
CACTTTAGTCCACATGTATTGCAAGGTGGGGAATCTTGAACAAGCCAATCAGGCATTTCA
ATTCCTTAAGGGGGAAGGCTTCCCACCAGATATGAAGCTTTTCACGTCAATGATCAGAGC
TCATCTTAAGTCTGGAGAACCAAAACAAGCAGAAAATTTGTTACGTGAAATGGAGAGATC
GATCAAACCCACAAAGGAACTATTCATGGATGTAATCCTGGCATTTGCTCAGCGTGGCAT
GATAGATGGAGCCGAAAGGGTGAAAACATCGATGTTACTTGCTGGATTCCAGCTCACGCC
AGAGTTATACACATCACTTATAGAAGCATATGGACGGGGTGGTCACGTTGGCCAAGCATA
TACCCTGTTTGAGCAGATGAGGAGTTCTGGACATGAACCAGATGATCGTTGCGTTGCTGG
TATGATGGTTGCCTACATGATGAAGAACCAACTGGACCACGCTCTGAGCTTCCTGTTGAA
GTTAGAGAAGGATGGACTTAAACCTGGAGTTAAAACAAACCTTGTCTTGCTGGATTGGTT
GTCTAGGTTGCAGCTAGTGCAGGAGGCTGAACAAGTTGTGCAGAAGATTAGAAAGGCTGG
AGAGGAACCCCTGGAAATGCATGTTTTCCTTGCTGATATGTACGCAAAGTCACAACAGGA
AGAGAGAACCCGCAAATCCCTCAAGATTTTAGAGGAGAAGAAGAAATTATTGAAGGCTTA
TCATTTTGAGAGGATTATAGCAGGCCTTCTCGAAGGGGGTTTCACGGAAGAAGCCAATAA
ATATTTCAAAATGATGAAATCCCATGGCTTTGTTCCATCACCAACAATTGAGATTGGGGT
CAAGGCTAGTTTTGGGGTTAGGGGGGGTGTTCATCCAACTGGTAGGCATCGTGGTTAAGG
CTTTGTCCGTTGGCAGTGATCAGCTGCCATTCAGGCACTGATTCTGGTTTGAAAATCTTG
AAGTAGCACTGACGACGCCATAGCCAATTCTGTCAACTGAAGCGGCAAAAAAAATTTCCG
GCTTCAATTGGTTTTGTTTGATCTGATATCAGATGTCTTCATTTTGAAGATGCCTCCATG
AACTATGGATTCATACAAGTAGATGGCCGCTTGTCCTGTTATTGCCGGGATTTTTTTTCC
TCATCAATTGTACTTGCATGCTCACACTTAATAAGTCTTTTAGTCACTGTAACGCCTGGA
TATCTAGGTTGTGCTTGTGCCAACAATCGGATTTATCTTAGCAAATATCAGTTATGACTT
ACCTGTCATAGGCATTTGTCACCAAATAAATGTTTACATTTTAATGAACAATGAAATTAT
ATCACACTGTC
clustalw multiple alignements is not computed in this case