Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6721 cluster # 6721       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6721#0 length = 571 sequences # 4  

consensusID : consensus_6721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 571
fasta sequence
                              [AGCAACCAGGCTTGATATATTTTAGTACTTCCCCCTTTTTTTTTCCGAGTGTGTGGCTCTCAGATGGAGTTAGTTCATCGTTATCCTAATCTGATTTCAATTCAAAATTGTTCAATTGATTGTTGGTTATATGCGTCTAGTATATGCAGAGGCTGGTTTCCAAGAAGGAGGAGACGAAGACGATCAGGGTGAAGCCGGGTTGGAAGAAGGGGATGAAGGTGACGTTCGAGGGGATGGGCGACGAGCGGCCGGGCTGCCTCCCAGGCGACGCCGTGTTCACCATCTCGGAGAGGAAGCACAAGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAAGGCCGAGGTGCCGCTGGTGAGCGCGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGTTCCGCGACGAGGTCATCTCCCCCGGGTACGAGAAGGTGGTCGCCGGCGAGGGCATGCCCGTCGTCGCCGCCGGCGGCGGCGGCGAGAAGGCCGCCGCCGCGCGCGGCGACCTCCGGGTGAAGTTCGACGTCGTCTTCCCCAAGAACCTCAC]

[+] EMBL AK067448             [AGCAACCAGGCTTGATATATTTTAGTACTTCCCCCTTTTTTTTTCCGAGTGTGTGGCTCTCAGATGGAGTTAGTTCATCGTTATCCTAATCTGATTTCAATTCAAAATTGTTCAATTGATTGTTGGTTATATGCGTCTAGTATATGCAGAGGCTGGTTTCCAAGAAGGAGGAGACGAAGACGATCAGGGTGAAGCCGGGTTGGAAGAAGGGGATGAAGGTGACGTTCGAGGGGATGGGCGACGAGCGGCCGGGCTGCCTCCCAGGCGACGCCGTGTTCACCATCTCGGAGAGGAAGCACAAGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAAGGCCGAGGTGCCGCTGGTGAGCGCGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGTTCCGCGACGAGGTCATCTCCCCCGGGTACGAGAAGGTGGTCGCCGACGAGGGCATGCCCGTCGTCGCCGCCGGCGGCGGCGGCGAGAAGGCCGCCGCCGCGCGCGGCGACCTCCGGGTGAAGTTCGACGTCGTCTTCCCCAAGAACCTCAC]
[+] EMBL AU101383             [                                                                                                                                                                                                          GAAGAAGGGGATGAAGGTGACGTTC AAGGGAT GGCGACGAGCGGCCGGGCTGCCTCCCAGGCGACGCCGTGTTCACCATCTCGGAGAGGAAGCNCAAGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAAGGCCGAGGTGCCGCTGGTGAGCGCGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGTTCCGCGACGAGGTCATCTCCCCCGGGTACGAGAAGGTGGTCGCCGGCGAGGGCATGCCCGTCGTCGCCGCCGGCGGC GCGGCGAGAAGGCCGCCGCCGCGCGCGGCGACCTCCGGGTGAAGTTCGACGTCGTCTTCCCCAAGAACCTCAC]
[+] EMBL C73862               [                                                                                                                                                                                                          GAAGAAGGGGATGAAGGTGACGTTCGAGGGGATGGGCGACGAGCGGCCGGGCTGCCTCCCAGGCGACGCCGTGTTCACCATCTCGGAGAGGAAGCACAAGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAAGGCCGAGGTGCCGCTGGTGAGCGCGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGTTCCGCGACGAGGTCATCTTCCCCGGGTACGAGAAGGTGGTCGCCGGCGAGGGCATTCCCGTCGTCGNCGCC GCGGCGG GGCG GAAGa                                                             ]
[+] EMBL BI808394             [                                                                                                                                                                                                                                                   AGC GCC GGCT CCTCCCCGGCGAC CCGTGTTCACCATCTCGGAGAGGAAGCACAAGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAA GCCGAGGT CC CTGGTGAGCGCGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGTTCCGCGACGAGGTCATCTCCCCCGGCTACGAGAAGGTCGTCGCCGGCGAGGGCATGCCCGTCGTCGCCGCCGGCGGCGGCGGCGAGAAGGCCGCCGCCGCGCGCGGCGACCTCCGGGTGAAGTTCGACGTCGTCTTCCCCAAGAACCTCAC]


>consensus_6721#0 AGCAACCAGGCTTGATATATTTTAGTACTTCCCCCTTTTTTTTTCCGAGTGTGTGGCTCT CAGATGGAGTTAGTTCATCGTTATCCTAATCTGATTTCAATTCAAAATTGTTCAATTGAT TGTTGGTTATATGCGTCTAGTATATGCAGAGGCTGGTTTCCAAGAAGGAGGAGACGAAGA CGATCAGGGTGAAGCCGGGTTGGAAGAAGGGGATGAAGGTGACGTTCGAGGGGATGGGCG ACGAGCGGCCGGGCTGCCTCCCAGGCGACGCCGTGTTCACCATCTCGGAGAGGAAGCACA AGGTGTTCAAGAGGAAAGGCAACGACCTGGTGCTCAAGGCCGAGGTGCCGCTGGTGAGCG CGCTCACCGGCTGGTCCTTCTCCTTCCGGCTGATCGGCGGCGAGAAGATGAGCTTCACGT TCCGCGACGAGGTCATCTCCCCCGGGTACGAGAAGGTGGTCGCCGGCGAGGGCATGCCCG TCGTCGCCGCCGGCGGCGGCGGCGAGAAGGCCGCCGCCGCGCGCGGCGACCTCCGGGTGA AGTTCGACGTCGTCTTCCCCAAGAACCTCAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)