|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6728#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1667 fasta sequence
[CCCACATCGATCGACGCCAAACTAGCTAGCTACTAGCAAATTGAAGCCAAGATGAAGAAGACCATGGTGCTCTACCCTGGCCTCTCTGTCAGCCACTTCCTCCCGATGATGAAGCTCGCCGACGAGCTCGTGGAGCACGGATACGCCGTCACCGTCGCACTCATCGACGACCCGCTCCAAAAGCAAATCGCCTTCACGGCCACCGTCGACCGCGTCATCTCGTCCAAGCCCTCCATATGCTTCCACAGGCTACCACGCGTCGACCACCTTCCCGCCGTCACCACCAACGACGGCGAATTCTACCTCCCCGGGTATCTGGACCTCGTGAGGCGACACAACGAGCCCCTCCATGGTTTCCTCTCTTCCCATTTCCGCGGAGGCATACAGGCCCTCGTCGTGGATATGATGTCCGTCGAAGCGCTCGACATAGCTGAGAGGCTCAAGGTCCCTGGCTACCTCTTCCACCCATCGAATGCAAGCCTTTTTGCCTTCTTCCTCCAGATTCCGTCCATCTGTGCAGAGAGTAAACGGAGCTTCAGTGAGCTAGGAGACACCCCTCTCGAGATCCCTGGCCTCCCTCCCATGCCGGCCTCCCACTTCATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTGGTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTCGACTCGCTGGAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCGCCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGGCCGGCGAAAGGGGAGAGCGACCCGAGAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTGCTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGGCCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGATCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGGCCAAGGCGCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCACCGGCGCGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGCGTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTGGAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGCAGGGCCTTGTCACGGCCGAGGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGCGCGCGTCACGGCGCACAAGGAAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGCGCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACATCGTGAGTTCGTGGCCGTATCGTGAACTCCGGACATGGGTGGAGGCATAAGTCTAACGGGTGACCGTTCGAGCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGATATGCTATTCCAAGAAAAACGTACTACCTCCGTTTTTTAATAGATGACACCGTTG]
[+] EMBL AK060997 [CCCACATCGATCGACGCCAAACTAGCTAGCTACTAGCAAATTGAAGCCAAGATGAAGAAGACCATGGTGCTCTACCCTGGCCTCTCTGTCAGCCACTTCCTCCCGATGATGAAGCTCGCCGACGAGCTCGTGGAGCACGGATACGCCGTCACCGTCGCACTCATCGACGACCCGCTCCAAAAGCAAATCGCCTTCACGGCCACCGTCGACCGCGTCATCTCGTCCAAGCCCTCCATATGCTTCCACAGGCTACCACGCGTCGACCACCTTCCCGCCGTCACCACCAACGACGGCGAATTCTACCTCCCCGGGTATCTGGACCTCGTGAGGCGACACAACGAGCCCCTCCATGGTTTCCTCTCTTCCCATTTCCGCGGAGGCATACAGGCCCTCGTCGTGGATATGATGTCCGTCGAAGCGCTCGACATAGCTGAGAGGCTCAAGGTCCCTGGCTACCTCTTCCACCCATCGAATGCAAGCCTTTTTGCCTTCTTCCTCCAGATTCCGTCCATCTGTGCAGAGAGTAAACGGAGCTTCAGTGAGCTAGGAGACACCCCTCTCGAGATCCCTGGCCTCCCTCCCATGCCGGCCTCCCACTTCATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTGGTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTCGACTCGCTGGAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCGCCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGGCCGGCGAAAGGGGAGAGCGACCCGAGAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTGCTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGGCCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGATCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGGCCAAGGCGCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCACCGGCGCGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGCGTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTGGAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGCAGGGCCTTGTCACGGCCGAGGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGCGCGCGTCACGGCGCACAAGGAAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGCGCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACATCGTGAGTTCGTGGCCGTATCGTGAACTCCGGACATGGGTGGAGGCATAAGTCTAACGGGTGACCGTTCGAGCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGATATGCTATTCCAAGAAAAACGTACTACCTCCGTTTTTTAATAGATGACACCGTTG]
consensusID : consensus_6728#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1200 fasta sequence
[TCCCTCCCATGCCGGCCTCCCACTTCATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTGGTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTAGACTCGCTGGAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCGCCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGGCCGGCGAAAGGGGAGAGCGACCCGAGAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTGCTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGGCCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGATCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGGCCAAGGCGCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCACCGGCGCGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGCGTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTGGAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGCAGGGCCTTGTCACGGCCGAGGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGCGCGCGTCACGGCGCACAAGGAAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGCGCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACATCGTGAGTTCGTGGCCGTATCGTGAACTCCGGACATGGGTGGAGGCATAAGTCTAACGGGTGACCGTTCGAGCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGATATGCTATTCCAAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATAAATTTTGTTGTATATGTAAAATTTATATATACTTGGTACTTGCTGAATACCCATAATTTACCAAAAATAAAAATATATTATAATATTGTCTAAAAGAAATACAGA]
[+] EMBL AK068336 [TCCCTCCCATGCCGGCCTCCCACTTCATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTGGTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTAGACTCGCTGGAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCGCCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGGCCGGCGAAAGGGGAGAGCGACCCGAGAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTGCTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGGCCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGATCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGGCCAAGGCGCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCACCGGCGCGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGCGTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTGGAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGCAGGGCCTTGTCACGGCCGAGGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGCGCGCGTCACGGCGCACAAGGAAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGCGCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACATCGTGAGTTCGTGGCCGTATCGTGAACTCCGGACATGGGTGGAGGCATAAGTCTAACGGGTGACCGTTCGAGCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGATATGCTATTCCAAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATAAATTTTGTTGTATATGTAAAATTTATATATACTTGGTACTTGCTGAATACCCATAATTTACCAAAAATAAAAATATATTATAATATTGTCTAAAAGAAATACAGA]
[+] EMBL BF430828 [ GGAGAGCGACCTGAGAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTGCTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGGCCTGGAGAAATCCGGCCACCGTTTCCTATGGGTGGTGCGCGCCGCCGTCGTCACCGACGATCCCGACAGGCTGGACCTCGGCGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGGCCAGGGCGCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCAGGCCACCGGAGCGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGCGTGCCGATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTAGAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGCAGGGCCTTGTCACGGCCGAGGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGCGCGCGTCACGGCGCACAAGGAAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGCGCGCTGCGTTTACAGAGTTTTTATCTGATGCAGACAGTCGACAGACGTCGTGAGTTCGTGGCGGTATCGg ]
consensusID : consensus_6728#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 887 fasta sequence
[ATCGTCGGGAGACCACTCAGTAATTTCCGACGTAGACTGCAAACCAGCTAGAAAATTCAGAGCCCACAATGAAGAAGACCATCGTGCTCTACCCCGGGGTCGCCGTCAGCCACTTCCTCCCCATGATGCAGCTCGCCGACGAGCTCGTCGACCACGGTTATGCCGTCGCCGTCGCGCTCATCGACCCCGCCTTCCAGCAGCACACCGCCTTCCCTGCCACCGTCGACCGCGTCGTCTCATCCAAGCCCACCGTACGCTTCCACAGGCTCCCCCGCGTCGAGCTCCCTCCCGCCACCGCCACCGACGACGGCGACTTCCTCCTCCTCGGGTACCTGGACCTCGTGAGGCGACACAACGAGTGCCTCCATGATTTCCTCTGCTCCATGCTTCCCGGAGGCGTACACGCCTTCGTCGTGGATTCTCTCTCCGTCGAAGCGCTCGACGTCGGCGAGAGGCTCAACGTCCCCGGCTTCGTCTTCCACCCGGCGAACTTGGGCGCCTTTGCCATCTTCCTCCAGCTTCCTTCGATCCGTGCAGAGGGTGAGCCGAGCTTCAGGGAGCTAGGAGACAACCCTCTCGAGCTCCCTGGCCTCCCTCCCATGCCGGCATCTCACCTCTTCTCCCAATTTCTCGAACACCCAGAGAGTCAAGTGTACAAGGCCATGATGAACGTGAGCCGCAGGATGTTACCGACTTGGAAGAGAAGCAAGATATTTTCAGAGAATCAGAGAGAATTCGGAAGAAGAGGAGAAGAAACAGAGAGAAAGACAGAGATGTAGAGAGAGAGAGAGAGAGAGATTGAGTTTGTATTGAGTTGGAAATTCTGTCTTTACATGTCATCCTCCCGATTCTCTCTCCCTCCTTTATATACAGCTAGTTAACCCAGT]
[+] EMBL AK111246 [ATCGTCGGGAGACCACTCAGTAATTTCCGACGTAGACTGCAAACCAGCTAGAAAATTCAGAGCCCACAATGAAGAAGACCATCGTGCTCTACCCCGGGGTCGCCGTCAGCCACTTCCTCCCCATGATGCAGCTCGCCGACGAGCTCGTCGACCACGGTTATGCCGTCGCCGTCGCGCTCATCGACCCCGCCTTCCAGCAGCACACCGCCTTCCCTGCCACCGTCGACCGCGTCGTCTCATCCAAGCCCACCGTACGCTTCCACAGGCTCCCCCGCGTCGAGCTCCCTCCCGCCACCGCCACCGACGACGGCGACTTCCTCCTCCTCGGGTACCTGGACCTCGTGAGGCGACACAACGAGTGCCTCCATGATTTCCTCTGCTCCATGCTTCCCGGAGGCGTACACGCCTTCGTCGTGGATTCTCTCTCCGTCGAAGCGCTCGACGTCGGCGAGAGGCTCAACGTCCCCGGCTTCGTCTTCCACCCGGCGAACTTGGGCGCCTTTGCCATCTTCCTCCAGCTTCCTTCGATCCGTGCAGAGGGTGAGCCGAGCTTCAGGGAGCTAGGAGACAACCCTCTCGAGCTCCCTGGCCTCCCTCCCATGCCGGCATCTCACCTCTTCTCCCAATTTCTCGAACACCCAGAGAGTCAAGTGTACAAGGCCATGATGAACGTGAGCCGCAGGATGTTACCGACTTGGAAGAGAAGCAAGATATTTTCAGAGAATCAGAGAGAATTCGGAAGAAGAGGAGAAGAAACAGAGAGAAAGACAGAGATGTAGAGAGAGAGAGAGAGAGAGATTGAGTTTGTATTGAGTTGGAAATTCTGTCTTTACATGTCATCCTCCCGATTCTCTCTCCCTCCTTTATATACAGCTAGTTAACCCAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6728#0 CCCACATCGATCGACGCCAAACTAGCTAGCTACTAGCAAATTGAAGCCAAGATGAAGAAG 60
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 ACCATGGTGCTCTACCCTGGCCTCTCTGTCAGCCACTTCCTCCCGATGATGAAGCTCGCC 120
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 GACGAGCTCGTGGAGCACGGATACGCCGTCACCGTCGCACTCATCGACGACCCGCTCCAA 180
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 AAGCAAATCGCCTTCACGGCCACCGTCGACCGCGTCATCTCGTCCAAGCCCTCCATATGC 240
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 TTCCACAGGCTACCACGCGTCGACCACCTTCCCGCCGTCACCACCAACGACGGCGAATTC 300
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 TACCTCCCCGGGTATCTGGACCTCGTGAGGCGACACAACGAGCCCCTCCATGGTTTCCTC 360
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 TCTTCCCATTTCCGCGGAGGCATACAGGCCCTCGTCGTGGATATGATGTCCGTCGAAGCG 420
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 CTCGACATAGCTGAGAGGCTCAAGGTCCCTGGCTACCTCTTCCACCCATCGAATGCAAGC 480
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 CTTTTTGCCTTCTTCCTCCAGATTCCGTCCATCTGTGCAGAGAGTAAACGGAGCTTCAGT 540
consensus_6728#1 ------------------------------------------------------------
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 GAGCTAGGAGACACCCCTCTCGAGATCCCTGGCCTCCCTCCCATGCCGGCCTCCCACTTC 600
consensus_6728#1 ----------------------------------TCCCTCCCATGCCGGCCTCCCACTTC 26
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 ATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTG 660
consensus_6728#1 ATCGACAATCGGCCCGAGGAGCCGCCTGAGAGTGAAGTGTACAAGGCCGTGATGGATTTG 86
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 GTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTCGACTCGCTG 720
consensus_6728#1 GTTCGCAGGTACACTAATAAATGCTCCAATGGCTTCCTCGTGAACACTGTAGACTCGCTG 146
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 GAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCG 780
consensus_6728#1 GAGGCACGGGTGGTGAACACGCTCAGGCACGCACGCCGTCAAGGCGGCCGGGCGTTGCCG 206
consensus_6728#2 ------------------------------------------------------------
consensus_6728#0 CCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGG-CCGGCGAAAGGGGAGAGCGACCCGA 839
consensus_6728#1 CCGTTCTACTGCGTCGGGCCGTTGGTCAACAAGG-CCGGCGAAAGGGGAGAGCGACCCGA 265
consensus_6728#2 ---------ATCGTCGGGAGACCACTCAGTAATTTCCGACGTAGACTGCAAACCAGCTAG 51
******* *** ** *** ** * * * * * *
consensus_6728#0 GAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTG 899
consensus_6728#1 GAGGCACGAGTGCCTCGCATGGCTCGACCGGCAACCGGACCGCACCGTCGTGTTCCTCTG 325
consensus_6728#2 AAAATTCAGA----------------GCCCACAAT-GAAGAAGACCATCGTG---CTCTA 91
* * ** *** * * *** ***** ****
consensus_6728#0 CTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGG 959
consensus_6728#1 CTTTGGTAGCACCGGCATTGGCAACCACTCCACGGAGCAGCTCAGGGAGATCGCCGTCGG 385
consensus_6728#2 CCCCGGGGTCGCCGTCAGCCACTTCCTCCCCATGATGCAGCTC---------GCCGACGA 142
* ** * *** ** * ** * *** * ******* **** **
consensus_6728#0 CCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGA 1019
consensus_6728#1 CCTGGAGAAATCCGGCCACCGTTTCCTGTGGGTGGTGCGCGCCCCCGTCGTCAGCGACGA 445
consensus_6728#2 GCTCG------TCGACCACGGTT-----------ATGC-CGTCGCCGTCGCGCTCATCGA 184
** * ** **** *** *** ** * ****** * ***
consensus_6728#0 TCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGG 1079
consensus_6728#1 TCCCGACAGGCCGGACCTCGACGCGCTCCTCCCGGCGGGGTTCTTGGAGCGAACCAGTGG 505
consensus_6728#2 CCCCGCCTTCCAGCAGCACACCGCCTTCC--CTGCCACCGTCGACCGCGTCGTCTCAT-- 240
**** * * * * * * *** *** * * * ** * * * *
consensus_6728#0 CCAAGGC-GCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCA 1138
consensus_6728#1 CCAAGGC-GCCGTCGTCAAGCAATGGGCGCCGCAGGTGGACGTGCTCCATCACCGGGCCA 564
consensus_6728#2 CCAAGCCCACCGTACGCTTCCACAGGCTCCCCCGCGTCGAGCTCCCTCCCGCCACCGCCA 300
***** * **** * ** ** ** * ** ** * * * * ****
consensus_6728#0 CCGGCG-CGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGC 1197
consensus_6728#1 CCGGCG-CGTTCGTGACACACTGTGGATGGAACTCGGTGTTGGAGGGGATCACCGCGGGC 623
consensus_6728#2 CCGACGACGGCGACTTCCTCCTCCTCGGGTACCTGGACCTCGTGAGGCGACACAACGAGT 360
*** ** ** * ** * * ** * * * ** *** ** *
consensus_6728#0 GTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTG 1257
consensus_6728#1 GTGCCAATGCTGTGCTGGCCGCTCCACTCGGAGCAGAAGATGAACAAGGTTCTCATGGTG 683
consensus_6728#2 GCCTCCATGATTTCCT--CTGCTCCATGCTTC-CCGGAGGCGTACACG-CCTTCGTCGTG 416
* * *** * * ** * ****** * * * ** * *** * ** * ***
consensus_6728#0 GAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGC-AGGGCCTTGTCACGGCCGA 1316
consensus_6728#1 GAGGAGATGGGCATCGCCGTGGAGATGGTCGGGTGGCAGC-AGGGCCTTGTCACGGCCGA 742
consensus_6728#2 GATT------CTCTCTCCGTCGAAGCGCTCGA-CGTCGGCGAGAGGCTCAACGTCCCCGG 469
** ** **** ** * *** * * ** ** * ** * ***
consensus_6728#0 GGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGC 1376
consensus_6728#1 GGAGGTGGAGGCCAAGGTGAGGCTGGTCATGGAGTCCGAGGCAGGCGTCGAGCTCAGGGC 802
consensus_6728#2 CTTCGTCTTCCACCCGGCGAACTTGGGCGCC---TTTGCCATCTTCCTCCAGCTTCCTTC 526
** * ** ** *** * * * * ** **** *
consensus_6728#0 GCGCGTCACGGCGCACAAGG-AAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGC 1435
consensus_6728#1 GCGCGTCACGGCGCACAAGG-AAGCCGCGGCCGTGGCTTGGACCGACGTTGGCTCGTCGC 861
consensus_6728#2 GATCCGTGCAGAGGGTGAGCCGAGCTTCAG--GGAGCTAGGA--GACA----ACCCTCTC 578
* * * * * ** *** * * * *** *** *** * ** *
consensus_6728#0 GCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACA-TCGTGAGTTCGT 1494
consensus_6728#1 GCGCTGCGTTCACAGAGTTTTTATCTAACGCAGACAGCCGACAGACA-TCGTGAGTTCGT 920
consensus_6728#2 GAGCTCCCT------GGCCTCCCTCCCATGCCGGCATCTCACCTCTTCTCCCAATTTCTC 632
* *** * * * * ** * ** * ** * ** ** * ***
consensus_6728#0 GGCCGTATCGTGAACTCCGGACATG-GGTGGAGGCATAAGTCTAACGGGTGACCGTTCGA 1553
consensus_6728#1 GGCCGTATCGTGAACTCCGGACATG-GGTGGAGGCATAAGTCTAACGGGTGACCGTTCGA 979
consensus_6728#2 GAACACCCAGAGAGTCAAGTGTACAAGGCCATGATGAACGTGAGCCGCAGGATGTTACCG 692
* * * ** * * ** * * ** ** ** * *
consensus_6728#0 GCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGAT 1613
consensus_6728#1 GCGCAGCCCGGACACGCTAGCGCATTCGGCCCAGTCCACATGCATTAGGCCAATCATGAT 1039
consensus_6728#2 ACTTGG--AAGAGAAGCAAGATATTTTCAGAGAATCAGAGAGAATTCGGAAGAAGAGGAG 750
* * ** * ** ** ** * ** * *** ** * * **
consensus_6728#0 ATGCTATTCCAAGAAAAACGTACTACCTCCGTTTTTTAATAGATGACACCGTTG------ 1667
consensus_6728#1 ATGCTATTCCAAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATAAATT 1099
consensus_6728#2 AAGAAA--CAGAGAGAAAGACAGAGATGTAG---AGAGAGAGAGAGAGAGAGATTGAGTT 805
* * * * *** *** * * * *
consensus_6728#0 ------------------------------------------------------------
consensus_6728#1 T-TGTTGTATATGTAAAATTTATATATACTTGGTACTTGCTGAATACCCATAATTTACCA 1158
consensus_6728#2 TGTATTGAGT-TGGAAATTCTGTCTTTACATGTCATCCTCCCGATTCTCTCTCCCTCCTT 864
consensus_6728#0 ------------------------------------------
consensus_6728#1 AAAATAAAAATATATTATAATATTGTCTAAAAGAAATACAGA 1200
consensus_6728#2 TATATACAGCTA-GTTAACCCAGT------------------ 887
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||