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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6740 cluster # 6740       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6740#0 length = 363 sequences # 4  

consensusID : consensus_6740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 363
fasta sequence
                              [TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTTAACTCCAGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTTATTTGTCATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTGTAATCAAGGACGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTGATGATATCAGATGAAA-CCGATATACTCCTACGGATAAGAGTTGACAGAGTC-AGCAATGCATGC-TGCATAGTC-AGATTTGT-GGA-TTTTTGCTGTGATAAAAATATAT-GACAGGACAGAGTAGTTCTGCAAAAA]

[+] EMBL AU164353             [TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTTAACTCCAGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTTATTTGTCATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTGTAATCAAGGACGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTGATGATATCAGATGAAA CCGATATACTCCTACGGATAAGAGTTGACAGAGTC AGCAATGCATGC TGCATAGTC AGATTTGTGGGA TTTTTGCTGTGATAAAAATATAT GACAGGACAGAGTAGTTCTGCAAAAA]
[+] EMBL AU165624             [TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTNAACTCCAGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTTATTTGTNATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTGTAATCAAGGACGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTNATGATATCAGATGAAA CCGATATACTCCTACGGATAAGAGTTGACAGAGTC AGCAATGCATGC TGCATAGTC AGATTTGT GGA TTTTTGCTGTGATAAAAATATAT GACAGGCCAGAGTAGTTCTGCAAAA ]
[+] EMBL C74630               [TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTTAACTCCAGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTTATTTGTCATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTGTAATCAAGGACGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTGATGATATCAGATGAAACCCGATATACTCCTACGGATAAGAGTTGACAGAGTCAAGCAATGCATGCTTGCATAGTCAAGATTTGTNGGATTTTTTGCTGTGATAAAAATATATGGCCAGGCCAGNGTAag          ]
[+] EMBL AU077672             [TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTTAACTCCAGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTTATTTGTCATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTNTAATCAAGGACGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTGATGATATCAGATGAAA CCGATATACT CTACGGATAAGAGTTGACAGAGTC AGCAATGCATGC TGCATAGTC AGATTTGT GGA TTTTTGCTGTGATAAAAATATAT GACAGGACAGAGTAGTTC        ]


>consensus_6740#0 TGGTTTAACTCTAGATTTTGGGAACTGGCTGTCACTAGTTTACTCTTATCTGTTAACTCC AGTGTAGCTTTGCTGACCTCAAAGCAGCACAGCTGTGCCGCAGTAGTTAGATGTTGTCTT ATTTGTCATACATAGTACTTATCTTCAGAAATTGTGCCTGATCTGGCTTGTAATCAAGGA CGGGTCAAATAGTTTGACATCATCATGCCCTGCTGTCTGCTAGAACATGTGATGATATCA GATGAAACCGATATACTCCTACGGATAAGAGTTGACAGAGTCAGCAATGCATGCTGCATA GTCAGATTTGTGGATTTTTGCTGTGATAAAAATATATGACAGGACAGAGTAGTTCTGCAA AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)