cluster # 6744

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Oryza sativa
cluster # 6744 cluster # 6744 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6744#0 length = 1798 sequences # 4
consensusID : consensus_6744#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1798
fasta sequence
                              [TTTTGTTAGCTGAACATTATTATTACTGAGTACAATTTTTTTTTTCTAAATATTACTAGCCATCGATTGTGCCAAGTGATGGGCTGGACACCGGCCACTTGCACTTGCTTTGTCGTTGCTCGCCTGGCATCCCCGGAAACGAGCTGGCGGTGGACGCGGCGGATACTCTTCTTCCTCCTCCCCTCTCCTGGTCAGGTCAC-TGGCCAGTG-GTCACAGCTCGCCGGAGAGGAAGACAAGCTTGTGGTGGTCGCCGGCCGATTGGCAATCATTCGGCAACGACGACCGATGCTGGTTCAGCCGCCGAACGCCGTGGCGGTCCGGGCGACGGCGGCGGGCAAGGAGCCCCTCTTCTCGTTCGGCGTCATCGCCGACGTGCAGTACGCCGACATCCCCGACGGCCGCTCCTTCCTCGGCGTCCCCCGCTACTACCGCCACAGCCTCACCATCCTGCAGAGAGCCGTCCGCTCCTGGAACGCCCACAACCACAAGCATCCCGTCGCCGGCGGCGGCGTCCGCTTCTGTGTCAACTTCGGCGACATCGTCGACGGCTTCTGCCCCAAGGACAGGTCGCTGGCTGCCGTCCAGGCCGTCGTCGCCGAGTTCGACCGCTTCCATGGCCCGGCCTACCACATGCTCGGCAACCACTGCCTCTACAACCTTCCCCGGAGCAAGCTCGTGTCGCTGCTCAGGATGCCGTCGGGGCGCGCCTACTACGACTTCTCGCCGTTCCCGGGCTACAGGTTCGTCGTCCTCGACGCGTACGACTTCAGCGCCGTGGGATGGCCGCGCGGCCACCCGGTGGCGGCGGCGGCGAGGAGGTTCTTGGACGAGAGGAACCCGAACGCGGACAAGAACAGCCCGAGCGGCCTCGCCGGCGTGGACCGGCGGTTCGTGATGTTCAACGGCGCCGTCGGCGAGGCGCAGCTGCGGTGGCTGGACGGCGTGCTGCGCGGGGCGGCGCGGCGGCGGGAGGCGGCGGTGGTGTGCAGCCACCTGCCGCTGCACCCCGGCGCGGCGTCGCCGTCGGGGCTGATGTGGAACTACGAGGAGGTGATGCGCGTGGTGCACCGGCACGGCTGCGTCGCGGCGTGCCTCGCCGGCCACGACCACAGGGGCGGCTACGGCGTCGACGCCCGCGGCGTCCACCACCGCACCCTGGAGGCGGCGCTGGAGTGCCCGCCCGGCACCGACGCCTTCGGCCGCGTCGACGTGTACCCCGACGGCCTGACGCTCGTCGGCGCCGGCAGGATGGGCAGCACAGACATGCGGCTCCAGCTCCACTCCCCAGTGACTGAGCTCAGCTAGCTAAGCTAAATCCCCTCTGCTGCCGCCATTGTGCTAATGCAACTGTTGTAATAGTGGCAATGTGATTGACAGCACGTTTCATGCATCCCTAAAAAAAAATAATCTAGTGTCCAATTGATGTCTCGTCGTCGTCCATGTCGCGCGGTTAGAAATCAAAGTCGTTCCGAGGAGGAAGACGAGAGGCGGCGTGGGCCCGGTTCGGCATAGAGGGGGATGCGGTGTTGACCAGTCCAAATTATCCGCGTGTAATTTTGCTATATATTTATCAATAATTTTTCTCTAAAAAATAATAAATGTTGTAAATTGCATGTAACTATAATGTAACTTTTATATAACTTTCATGTAATTTTGAACCGTTATATTTGTTTCAAGATTTGTGCAACAGTGCAAGTGAGGAATTAAAAGTCACGGCGTGTATACATGTGAGATGATTCGTCCTTACGACCTCCGTTTCACCGAAATAATATATTACGGAGAGAGTTCTAAAAAAAGA]

[-] EMBL BI813200             [TTTTGTTAGCTGAACATTATTATTACTGAGTACAATTTTTTTTTTCTAAATATTACTAGCCATCGATTGTGCCAAGTGATGGGCTGGACACCGGCCACTTGCACTTGCTTTGTCGTTGCTCGCCTGGCATCCCCGGAAACGAGCTGGCGGTGGACGCGGCGGATACTCTTCTTCCTCCTCCCCTCTCCTGGTCAGGTCACTTGGCCAGTGTGTCACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK108300             [                                                                                                                                                                             CCTCCTCCCCTCTCCTGGTCAGGTCAC TGGCCAGTG GTCACAGCTCGCCGGAGAGGAAGACAAGCTTGTGGTGGTCGCCGGCCGATTGGCAATCATTCGGCAACGACGACCGATGCTGGTTCAGCCGCCGAACGCCGTGGCGGTCCGGGCGACGGCGGCGGGCAAGGAGCCCCTCTTCTCGTTCGGCGTCATCGCCGACGTGCAGTACGCCGACATCCCCGACGGCCGCTCCTTCCTCGGCGTCCCCCGCTACTACCGCCACAGCCTCACCATCCTGCAGAGAGCCGTCCGCTCCTGGAACGCCCACAACCACAAGCATCCCGTCGCCGGCGGCGGCGTCCGCTTCTGTGTCAACTTCGGCGACATCGTCGACGGCTTCTGCCCCAAGGACAGGTCGCTGGCTGCCGTCCAGGCCGTCGTCGCCGAGTTCGACCGCTTCCATGGCCCGGCCTACCACATGCTCGGCAACCACTGCCTCTACAACCTTCCCCGGAGCAAGCTCGTGTCGCTGCTCAGGATGCCGTCGGGGCGCGCCTACTACGACTTCTCGCCGTTCCCGGGCTACAGGTTCGTCGTCCTCGACGCGTACGACTTCAGCGCCGTGGGATGGCCGCGCGGCCACCCGGTGGCGGCGGCGGCGAGGAGGTTCTTGGACGAGAGGAACCCGAACGCGGACAAGAACAGCCCGAGCGGCCTCGCCGGCGTGGACCGGCGGTTCGTGATGTTCAACGGCGCCGTCGGCGAGGCGCAGCTGCGGTGGCTGGACGGCGTGCTGCGCGGGGCGGCGCGGCGGCGGGAGGCGGCGGTGGTGTGCAGCCACCTGCCGCTGCACCCCGGCGCGGCGTCGCCGTCGGGGCTGATGTGGAACTACGAGGAGGTGATGCGCGTGGTGCACCGGCACGGCTGCGTCGCGGCGTGCCTCGCCGGCCACGACCACAGGGGCGGCTACGGCGTCGACGCCCGCGGCGTCCACCACCGCACCCTGGAGGCGGCGCTGGAGTGCCCGCCCGGCACCGACGCCTTCGGCCGCGTCGACGTGTACCCCGACGGCCTGACGCTCGTCGGCGCCGGCAGGATGGGCAGCACAGACATGCGGCTCCAGCTCCACTCCCCAGTGACTGAGCTCAGCTAGCTAAGCTAAATCCCCTCTGCTGCCGCCATTGTGCTAATGCAACTGTTGTAATAGTGGCAATGTGATTGACAGCACGTTTCATGCATCCCTAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB619065             [                                                                                                                                                                                                               GTG GTCACAGCTCGCCGGAGAGGAAGACAAGCTTGTGGTGGTCGCCGGCCGATTGGCAATCATTCGGCAACGACGACCGATGCTGGTTCAGCCGCCGAACGCCGTGGCGGTCCGGGCGACGGCGGCGGGCAAGGAGCCCCTCTTCTCGTTCGGCGTCATCGCCGACGTGCAGTACGCCGACATCCCCGACGGCCGCTCCTTCCTCGGCGTCCCCCGCTACTACCGCCACAGCCTCACCGTCCTGCAGAGAGCCGTCCGCTCCTGGAACGCCCACAACCACAAGCATCCCGTCGCCGGCGGCGGCGTCCGCTTCTGTGTCAACTTCGGCGACATCGTCGACGGCTTCTGCCCCAAGGACAGGTCGCTGGCTGCCGTCCAGGCCGTCGTCGCCGAGTTCGACCGCTTCCATGGCCCGGCCTACCACATGCTCGGCAACCACTGCCTCTACAACCTTCCCCGGAGCAAGCTCGTGTCGCTGCTCAGGATGCCGTCAGGGCGCGCCTACTACGACTTCTCGCCGTTCCCGGGCTACAGGTTCGTCGTCCTCGACGCGTACGACTTCAGCGCCGTGGGATGGCCGCGCGGCCACCCGGTGGCGGCGGCGGCGAGGAGGTTCTTGGACCAGAGGAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB619066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGGTACGGCGTGGACGCCCGCGGCGTCCACCACCGCACCCTGGAGGCGGCGCTGGAGTGCCCGCCCGGCACCGACGCCTTCGGCCGCGTGGACGTGTACCCCGACGGCCTGACGCTTGTCGGCGCCGGCAGGATGGGCAGCACAGACATGCGGCTCCAGCTCCACTCCCCAGTGACTGAGCTCAGCTAGCTAAGCTAAATCCTCTCTGCTGCCGCCATTGTGCTAATGCAACTGTTGTAATAGTGGCAATGTGATTGACAGCACGTTTCATGCATCCCTAAAAAAAAATAATCTAGTGTCCAATTGATGTCTCGTCGTCGTCCATGTCGCGCGGTTAGAAATCAAAGTCGTTCCGAGGAGGAAGACGAGAGGCGGCGTGGGCCCGGTTCGGCATAGAGGGGGATGCGGTGTTGACCAGTCCAAATTATCCGCGTGTAATTTTGCTATATATTTATCAATAATTTTTCTCTAAAAAATAATAAATGTTGTAAATTGCATGTAACTATAATGTAACTTTTATATAACTTTCATGTAATTTTGAACCGTTATATTTGTTTCAAGATTTGTGCAACAGTGCAAGTGAGGAATTAAAAGTCACGGCGTGTATACATGTGAGATGATTCGTCCTTACGACCTCCGTTTCACCGAAATAATATATTACGGAGAGAGTTCTAAAAAAAGA]




>consensus_6744#0
TTTTGTTAGCTGAACATTATTATTACTGAGTACAATTTTTTTTTTCTAAATATTACTAGC
CATCGATTGTGCCAAGTGATGGGCTGGACACCGGCCACTTGCACTTGCTTTGTCGTTGCT
CGCCTGGCATCCCCGGAAACGAGCTGGCGGTGGACGCGGCGGATACTCTTCTTCCTCCTC
CCCTCTCCTGGTCAGGTCACTGGCCAGTGGTCACAGCTCGCCGGAGAGGAAGACAAGCTT
GTGGTGGTCGCCGGCCGATTGGCAATCATTCGGCAACGACGACCGATGCTGGTTCAGCCG
CCGAACGCCGTGGCGGTCCGGGCGACGGCGGCGGGCAAGGAGCCCCTCTTCTCGTTCGGC
GTCATCGCCGACGTGCAGTACGCCGACATCCCCGACGGCCGCTCCTTCCTCGGCGTCCCC
CGCTACTACCGCCACAGCCTCACCATCCTGCAGAGAGCCGTCCGCTCCTGGAACGCCCAC
AACCACAAGCATCCCGTCGCCGGCGGCGGCGTCCGCTTCTGTGTCAACTTCGGCGACATC
GTCGACGGCTTCTGCCCCAAGGACAGGTCGCTGGCTGCCGTCCAGGCCGTCGTCGCCGAG
TTCGACCGCTTCCATGGCCCGGCCTACCACATGCTCGGCAACCACTGCCTCTACAACCTT
CCCCGGAGCAAGCTCGTGTCGCTGCTCAGGATGCCGTCGGGGCGCGCCTACTACGACTTC
TCGCCGTTCCCGGGCTACAGGTTCGTCGTCCTCGACGCGTACGACTTCAGCGCCGTGGGA
TGGCCGCGCGGCCACCCGGTGGCGGCGGCGGCGAGGAGGTTCTTGGACGAGAGGAACCCG
AACGCGGACAAGAACAGCCCGAGCGGCCTCGCCGGCGTGGACCGGCGGTTCGTGATGTTC
AACGGCGCCGTCGGCGAGGCGCAGCTGCGGTGGCTGGACGGCGTGCTGCGCGGGGCGGCG
CGGCGGCGGGAGGCGGCGGTGGTGTGCAGCCACCTGCCGCTGCACCCCGGCGCGGCGTCG
CCGTCGGGGCTGATGTGGAACTACGAGGAGGTGATGCGCGTGGTGCACCGGCACGGCTGC
GTCGCGGCGTGCCTCGCCGGCCACGACCACAGGGGCGGCTACGGCGTCGACGCCCGCGGC
GTCCACCACCGCACCCTGGAGGCGGCGCTGGAGTGCCCGCCCGGCACCGACGCCTTCGGC
CGCGTCGACGTGTACCCCGACGGCCTGACGCTCGTCGGCGCCGGCAGGATGGGCAGCACA
GACATGCGGCTCCAGCTCCACTCCCCAGTGACTGAGCTCAGCTAGCTAAGCTAAATCCCC
TCTGCTGCCGCCATTGTGCTAATGCAACTGTTGTAATAGTGGCAATGTGATTGACAGCAC
GTTTCATGCATCCCTAAAAAAAAATAATCTAGTGTCCAATTGATGTCTCGTCGTCGTCCA
TGTCGCGCGGTTAGAAATCAAAGTCGTTCCGAGGAGGAAGACGAGAGGCGGCGTGGGCCC
GGTTCGGCATAGAGGGGGATGCGGTGTTGACCAGTCCAAATTATCCGCGTGTAATTTTGC
TATATATTTATCAATAATTTTTCTCTAAAAAATAATAAATGTTGTAAATTGCATGTAACT
ATAATGTAACTTTTATATAACTTTCATGTAATTTTGAACCGTTATATTTGTTTCAAGATT
TGTGCAACAGTGCAAGTGAGGAATTAAAAGTCACGGCGTGTATACATGTGAGATGATTCG
TCCTTACGACCTCCGTTTCACCGAAATAATATATTACGGAGAGAGTTCTAAAAAAAGA
clustalw multiple alignements is not computed in this case