These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6751#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2153 fasta sequence [ATTAAACAACACTCATCTCCCCCTCCCCCTTGAAACCCTAGCTCCGCTTCGCCGTCGTCCTCCTCCTCCTCCCCGGCGGCGGCGGCGGCGGCCATGGCGTCCGCGGCGGCGCCGAAGCGGTGCTACTACGAGGTCCTGGGCGTCCCCCGCGACTGCTCCCCGGCCGACATCAAGCTCGCCTTCCGCCGCCTCGCGCTCTCCCTCCACCCCGACAAGCAGCCCCCCGGCTCCGACGTCGCCGCCGCCACCGCCGCCTTCCAGGAGCTCCAGCACGCGCACTCCGTCCTCTCCGACCCCCACGAGCGCTCCTACTACGACTCCCACCGCTCCCAGATCCTCTTCTCCGACCACCACCCCTCCTCCGGCCCCGGCCGCGGCGGCGGCGTCGCCTCCGCCTCCGCGTCCCCCGTCCCCGACCTCTTCGCCTTCTTCTCCTCCTCCGCCTTCTCCGGCTTCTCCGACTCCGGCCGCGGCTTCTACAAGGTCTACGGCGACGTCTTCGACCGGGTCTTCGCGCAGGAGCTCGCCTACGCCCGCCGCATGGGCATGCCCGCCGACGCCGTCCCCACGCCGCCGGTGATCGGGAACCTCGATTCCCCCCACGCGCAGGTCGCCGCGTTCTACAGCTACTGGCTCGGGTTCGGCACCGCGATGGACTTCGGGTGGGCGGCCGAGTGGGACGCCGCGCGGGGGGAGAGCCGCCGGGTGAGGCGGCTCATGGAGGAGGACAACAAGAAGGCGACGCGCAAGGCGCGGCGGGAGTACAACGACGCCGTGAGAGGGCTCGCCGCGTTCTGCAAGAAGAGGGACAAGCGGGTGGTGGACATGGCGCTGAAGAAGAAGGTGGAGGAGGAGAAGAGGAAGGCGGAGGAGGCGGCGAGGAAGAAGGAGGAGGAGAGGAGGAGGAAGGAGCGAGCGATGGCGTACCAGGAGCCCGAGTGGGCGAGGGTGGACGAGGATGAGGCGGCGGTGTTTGAGGACGACGAGGAGGAGGAGACGAGGGCGAAGAGGAAGGAGGAGCTGTACTGCGTGGCGTGTGATAAGAAGTTCAAGTCCGACAAGCAGTGGAAGAACCATGAGCAGTCAAAGAAGCATAGAGATAAGGTGTCCGAGCTGAGGATGGTGTTTGAAGAAGAGGAAGAAGCTTTGAAGGATGCTGAAGAAGAGGAGCCAGAAGAAGTTGATGTGGGGTTTGATTTTCAGCCTGCACAGGAATCAGAGGAGAGTGAATTTTCAGATGCTGCTGAAGAGTTGGCTGACGAGTTGAGCGAGGGATTGGAGGTGCGTGATGAAGAAGAGAAGGGTGATAAGCACTTGGGTAATGGGGAACAAAAGGTTGGTTCATATGATGAAACCAGTGTGTTAGAGGAAATGCTATCGAGGTCTAGGCGCAAGAATAGGAAGAGTGGTTTTGTCGCTCCTCAGGAGGAAGCTTCACCAGCTGGTGCCATGGATGATGATGACGATGAGGATACAAGCTATGAGATTAATAATGTCAAAAAGAAAGGACGCCGGAGACGGGCAGCAAAGAAGGGAGGTACTTATGCTGATAATGGGCAAGGTAGGAAGAGTGAGAATCAGCCTGAGGAATCCAGGCATAATAATGATGAAAATGGTGCTGATGATAAGATGGAAGGTCCATCTTCTAATGAAGACAGTGCTGCAGCAAGTAAAGAAGATCAGCAGAAAGGAAAAACCGGTAATACTAAAAAGAACAAGAAAGGCACAGAAAAGAACAC-TACAACTATATCTTCTGAACAAAAGGGTACATCGAAGGGAAAGAAGCAAAAGGA-GTTTCAAAGGCACCCAGTAATGACTGTGAAACGTGTGGATCAACGTTTGACTCAAGGAACAAGTTGTTTTCTCACTTGGAAGAAACA-GGTCATGCAATGCTGAAGACA-CGACAGAAAAATCGCTGAAGAGGACAAGAAAGTAGTTTTCTTTTACCGTTTGTCCCA-GTTGATGCTGATAGATTAGCACATCGAC-AAAAAGGCCATATATATGGTTTATAGCCC-AATTTTGATATGTGTAGTAGA-CCGTTTTCTTTCTTCCTGGATTTGTTTCATTGGTTTGTGGTACAGAATGACAAGAACTGATTATTATTATTCAATCGAAATACACACCATCTTGTAATTTTTCTCCCAAAAAAAAAA] [+] EMBL AK109540 [ATTAAACAACACTCATCTCCCCCTCCCCCTTGAAACCCTAGCTCCGCTTCGCCGTCGTCCTCCTCCTCCTCCCCGGCGGCGGCGGCGGCGGCCATGGCGTCCGCGGCGGCGCCGAAGCGGTGCTACTACGAGGTCCTGGGCGTCCCCCGCGACTGCTCCCCGGCCGACATCAAGCTCGCCTTCCGCCGCCTCGCGCTCTCCCTCCACCCCGACAAGCAGCCCCCCGGCTCCGACGTCGCCGCCGCCACCGCCGCCTTCCAGGAGCTCCAGCACGCGCACTCCGTCCTCTCCGACCCCCACGAGCGCTCCTACTACGACTCCCACCGCTCCCAGATCCTCTTCTCCGACCACCACCCCTCCTCCGGCCCCGGCCGCGGCGGCGGCGTCGCCTCCGCCTCCGCGTCCCCCGTCCCCGACCTCTTCGCCTTCTTCTCCTCCTCCGCCTTCTCCGGCTTCTCCGACTCCGGCCGCGGCTTCTACAAGGTCTACGGCGACGTCTTCGACCGGGTCTTCGCGCAGGAGCTCGCCTACGCCCGCCGCATGGGCATGCCCGCCGACGCCGTCCCCACGCCGCCGGTGATCGGGAACCTCGATTCCCCCCACGCGCAGGTCGCCGCGTTCTACAGCTACTGGCTCGGGTTCGGCACCGCGATGGACTTCGGGTGGGCGGCCGAGTGGGACGCCGCGCGGGGGGAGAGCCGCCGGGTGAGGCGGCTCATGGAGGAGGACAACAAGAAGGCGACGCGCAAGGCGCGGCGGGAGTACAACGACGCCGTGAGAGGGCTCGCCGCGTTCTGCAAGAAGAGGGACAAGCGGGTGGTGGACATGGCGCTGAAGAAGAAGGTGGAGGAGGAGAAGAGGAAGGCGGAGGAGGCGGCGAGGAAGAAGGAGGAGGAGAGGAGGAGGAAGGAGCGAGCGATGGCGTACCAGGAGCCCGAGTGGGCGAGGGTGGACGAGGATGAGGCGGCGGTGTTTGAGGACGACGAGGAGGAGGAGACGAGGGCGAAGAGGAAGGAGGAGCTGTACTGCGTGGCGTGTGATAAGAAGTTCAAGTCCGACAAGCAGTGGAAGAACCATGAGCAGTCAAAGAAGCATAGAGATAAGGTGTCCGAGCTGAGGATGGTGTTTGAAGAAGAGGAAGAAGCTTTGAAGGATGCTGAAGAAGAGGAGCCAGAAGAAGTTGATGTGGGGTTTGATTTTCAGCCTGCACAGGAATCAGAGGAGAGTGAATTTTCAGATGCTGCTGAAGAGTTGGCTGACGAGTTGAGCGAGGGATTGGAGGTGCGTGATGAAGAAGAGAAGGGTGATAAGCACTTGGGTAATGGGGAACAAAAGGTTGGTTCATATGATGAAACCAGTGTGTTAGAGGAAATGCTATCGAGGTCTAGGCGCAAGAATAGGAAGAGTGGTTTTGTCGCTCCTCAGGAGGAAGCTTCACCAGCTGGTGCCATGGATGATGATGACGATGAGGATACAAGCTATGAGATTAATAATGTCAAAAAGAAAGGACGCCGGAGACGGGCAGCAAAGAAGGGAGGTACTTATGCTGATAATGGGCAAGGTAGGAAGAGTGAGAATCAGCCTGAGGAATCCAGGCATAATAATGATGAAAATGGTGCTGATGATAAGATGGAAGGTCCATCTTCTAATGAAGACAGTGCTGCAGCAAGTAAAGAAGATCAGCAGAAAGGAAAAACCGGTAATACTAAAAAGAACAAGAAAGGCACAGAAAAGAAC ACAACTATATCTTCTGAACAAAAGGGTACATCGAAGGGAAAGAAGCAAAAGGAGGTTTCAAAGGCACCCAGTAATGACTGTGAAACGTGTGGATCAACGTTTGACTCAAGGAACAAGTTGTTTTCTCACTTGGAAGAAACA GGTCATGCAATGCTGAAGACA CGACAGAAAAATCGCTGAAGAGGACAAGAAAGTAGTTTTCTTTTACCGTTTGTCCCA GTTGATGCTGATAGATTAGCACATCGAC AAAAAGGCCATATATCTGGTTTATAGCCC AATTTTGATATGTGTAGTAGAGCCGTTTTCTTTCTTCCTGGATTTGTTTCATTGGTTTGTGGTACAGAATGACAAGAACTAATTATTATTATTCAATCGAAATACACACCATCTTGTA ] [+] EMBL CA764978 [ GGCGAAGAGGAAGGAGGAGCTCTACTGCGTGGCGTGTAATAAGAAGTTCAAGTCGGACAAGCAGTGGAAGAACCATGAGCAGTCAAAGAAGCATAGAGATAAGGTGTCCGAGCTGAGGATGGTGTTTGAAGAAGAGGAAGAAGCTTTGAAGGATGCTAAAGAAGAGGAGCCAGAAGAAGTTGATGTGGGGTTTGATTTTCAGCCTGCACAGGAATCAGAGGAGAGTGAATTTCCAGATGCTGCTGAAGAGTTGGCTGACGAGTTGAGCGAGGGATTGGAGGTGCGTGATGAAGAAGAGAAGGGTGATAAGCACTTGGGTAATGGGGAACAAAAGGTTGGTTCATATGATGAAACCAGTGTGTTAGAGGAAATGCTATCGAGGTCTAGGCGTAAGAATAGGAAGAGTGGTTTTGTCGCTCCTCAGGAGGAAGCTTCACCAGCTGGTGCCATGGATGATGATGACGATGAGGATACAAGCTATGAGATTAATAATGTCAAAAAGAAAGGACACCGGAGACGGGCAGCAAAGAAGGGAGGTACTTATGCTGATAATGGGCAAGGTAGGAGGAGTGAGGATCAGCCTGAGGAATCCAGGCATAATAATGATGAAAATGGTGCTGATGATAAGATGGAAGGTCCATCTTCTAATGAAGACAGTGCTGCAGCAAGTAAAGAAGATCAGCAGAAAGGAAAAACCGGTAATACTAAAAAGAACAAGAAAGGCACAGAAAAGAACAC TACAACTATATCTTCTGAACAAAAGGGTA ] [+] EMBL BI813171 [ AAGAAGATCA CAGAAAGGAAAAACCGGTAATACTTAAAAGAACAGTAAAGGCACAGAAAAGAACACGAACAACTATATCTTCTGAAC AAAGGGTACATCGAAGGGAAAGAAGC AAAGGA GTTTCAAAGGCACCCAGTAATGACTGTGAAACGTGTGGATCAACGTTTGACTCAAGGAACAAGTTGTTTTCTCACTTGGAAGAAACACGGTCATGCAATGCTGAAGACA CGACAGAAAAATCGCTGAAGAGGACAAGAAAGTAGTTTTCTTTTACCGTTTGTCCCACGTTGATGCTGATAGATTAGCACATCGAC CAAAAGGCCATATATATGGTTTATAGCCC ATTTTGATATGTGTAGTAGA CCGTTTTCTTTCTTCCTGGATTTGTTTCATTGGTTTGTGGTACAGAATGACAAGAACTGATTATTATTATTCAATCGAAATACACACCATCTTGTAATTTTTCTCCCAAAAAAAAAA] [+] EMBL BI813249 [ TCTTCTGACCAAAAGGGTACATCGAAGGGAAAGAA CCAAAGGA GTTTCAAAGCCACCCAGTAATGACTGTGAAACGTGTGGATCAACGTTTGACTCAAGGAACAAGTTGTTTTCTCACTTGGAAGAAACA GGTCATCCAATGCTGAAGACACCGACAGAAAAATCGCTGAAGAGGACAAGAAAGTAGTTTTCTTTTACCGTTTGTCCCA GTTGATGCTGATAGATTAGCACATCGACAAAAAAGGCCATATATATGGTTTATAGCCCAAATTTTGATATGTGTAGTAGA CCGTTTTCTTTCTTCCTGGATTTGTTTCATTGGTTT TGGTACAGAATGACAAGAACTGATTATTATTATTCAATCGAAATACACACCATCTTGTAATTTTTCTCCCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||