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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6752 cluster # 6752       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6752#0 length = 462 sequences # 4  

consensusID : consensus_6752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 462
fasta sequence
                              [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC-TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA]

[+] EMBL OSA308374            [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAA ]
[+] EMBL OSC544               [   tgtGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAcct   ]
[+] EMBL CA305758             [          ACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCACNTGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAACTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACA                                                                                                       ]
[+] EMBL AT003442             [                GAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCCCCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA]


>consensus_6752#0 GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAG TTGAAGGTTGGGATGCACTGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACG ATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGA AATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAAC TGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGAT GTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAG TAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGA TTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)