These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6752#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 462 fasta sequence [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC-TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA] [+] EMBL OSA308374 [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAA ] [+] EMBL OSC544 [ tgtGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAcct ] [+] EMBL CA305758 [ ACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCACNTGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAACTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACA ] [+] EMBL AT003442 [ GAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCCCCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||