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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6757 cluster # 6757       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6757#0 length = 932 sequences # 4  

consensusID : consensus_6757#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 932
fasta sequence
                              [AAAGAAAAAAAAAAAACCTCACGCATCGCAAATCGCTCCTCCCCCATGGGCGACGCAGGC-GGGCCCCTTCCCGGCGAGCGCCGCCTCAGCCCCGCCGACCCCGAGGAGCCCTCGCCGCCGGCCTCATCGTCGGATGGGACTGGGAGCGGCGGCGGCGGCGGCGAAAACTCCGTGGAGGAGGGCGACGGGGAAGGGCCCGGNTCCGGGTCCGGTACACCCACGGCGAAGCGGC-AGCTCTTCGACGCTGACGGCTCCGCGTCGAGGCCCACCCGCCGCCGCCGCATCGCCTCCGACGACGAGATTACTCAGGCTTTTACAGGTGAAACTACAAGTGAAAACA-CTTCCTCTACGAATGAAAGTAATCCTTTCATTGCAGTATTGGATAGTATGTGGTCTAAGAAGAGAGAGCTTGATGCTATAAAGGAGGCCGGGAAAGATGAGCGCCATGAAAAGTTATTGTCATTGCAAAAAGAGAGATTGGCACTAGAAAGACAGAAGTTAGAATACGAGAGGAATTTATTGGAATTCAAGAGAAACCAGCGGGATGAGAGAATTATGAACATGGACCTTAGTGATATGACTGGGCAACTAAGAGAATACTACTTGAGGTTGCAGGGTGAGATCATGGCTCGACGATCAGGTTGAGCTGCACTACTTGTTGTGTTGATGGCCTGCTTATCGTATGAACTATCTGTCGTATGAGCTACTTGCTGTGTGAACTATTTGTTATATGACCTATTTATTGCATGAACTCCTGTGATGCATGGACATATTTGTGATGTATGAACTAAGCCTGAGTGCAAATTTTCTACTTCTAACGCATGCTTTCTACCATTTTGGAAAAACCTCTGTTGTTCAGTTGCAAGTAATCTAGCACTATCATAATTCGTTATATAATTATTGGATCGCATGTATTCAAAAAAAAAAAAAAA]

[+] EMBL AK069168             [AAAGAAAAAAAAAAAACCTCACGCATCGCAAATCGCTCCTCCCCCATGGGCGACGCAGGC GGGCCCCTTCCCGGCGAGCGCCGCCTCAGCCCCGCCGACCCCGAGGAGCCCTCGCCGCCGGCCTCATCGTCGGATGGGACTGGGAGCGGCGGCGGCGGCGGCGAAAACTCCGTGGAGGAGGGCGACGGGGAAGGGCCCGGGTCCGGGTCCGGTACACCCACGGCGAAGCGGC AGCTCTTCGACGCTGACGGCTCCGCGTCGAGGCCCACCCGCCGCCGCCGCATCGCCTCCGACGACGAGATTACTCAGGCTTTTACAGGTGAAACTACAAGTGAAAACA CTTCCTCTACGAATGAAAGTAATCCTTTCATTGCAGTATTGGATAGTATGTGGTCTAAGAAGAGAGAGCTTGATGCTATAAAGGAGGCCGGGAAAGATGAGCGCCATGAAAAGTTATTGTCATTGCAAAAAGAGAGATTGGCACTAGAAAGACAGAAGTTAGAATACGAGAGGAATTTATTGGAATTCAAGAGAAACCAGCGGGATGAGAGAATTATGAACATGGACCTTAGTGATATGACTGGGCAACTAAGAGAATACTACTTGAGGTTGCAGGGTGAGATCATGGCTCGACGATCAGGTTGAGCTGCACTACTTGTTGTGTTGATGGCCTGCTTATCGTATGAACTATCTGTCGTATGAGCTACTTGCTGTGTGAACTATTTGTTATATGACCTATTTATTGCATGAACTCCTG                                                                                                                                                                               ]
[+] EMBL AU068723             [     AAAAAAAAAAACCTCACGCATCGCAAATCGCTCCTCCCCCATGGGCGACGNAGGCGGGGCCCCTTCCCGGCGAGCGCCGCCTCAGCCCCGCCGACCCCGAGGAGCCCTCGCCGCCGGCCTCATCGTCGGATGGGACTGGGAGCGGCGGCGGCGGCGGCGAAAACTCCGTGGAGGAGGGCGACGGGGAAGGGCCCGGNTCCGGGTCCGGTACACCCACGGCGAAG GGCNAGNTCTTCGACGCTGACGGCTCCGCGTCGAGGCCCACCCGCCGCCGNCGAATCGCTTCCGACGACGAGATTACTCAGGCTTTTACAGGTGAACTTACANGTGAAAAAANTTTCCTTTACGATTGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS2712A             [                            CAAATCGCTCCTCCCCCATGGGCGACGCAGGC GGGCCCCTTCCCGGCGAGCGCCGCCTCANCCCCGCCGACCCCGAGGAGCCCTNGCCGCCGGCCTCATCGTCGGATGGGACTGGGAGTGGTGGCGGCGGNGGCGAAAACTCCGTNGAGGAGGNCGACGGGGAAGGGCCCGGNTCCGGGTCCGGTACACCCACGGCGAAGGGGC AGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU166763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGTTAGAATACGAGAGGAATTTATTGGAATTCAAGAGAAACCAGCGGGATGAGAGAATTATGAACATGGNCCTTAGTGATATGACTGGGCAACTAAGAGAATACTACTTGAGGTTGCAGGGTGAGATCATGGCTCGACGATCAGGTTGAGCTGCACTACTTGTTGTGTTGATGGCCTGCTTATCGTATGAACTATCTGTCGTATGAGCTACTTGCTGTGTGAACTATTTGTTATATGACCTATTTATTGCATGAACTCCTGTGATGCATGGACATATTTGTGATGTATGAACTAAGCCTGAGTGCAAATTTTCTACTTCTAACGCATGCTTTCTACCATTTTGGAAAAACCTCTGTTGTTCAGTTGCAAGTAATCTAGCACTATCATAATTCGTTATATAATTATTGGATCGCATGTATTCAAAAAAAAAAAAAAA]


>consensus_6757#0 AAAGAAAAAAAAAAAACCTCACGCATCGCAAATCGCTCCTCCCCCATGGGCGACGCAGGC GGGCCCCTTCCCGGCGAGCGCCGCCTCAGCCCCGCCGACCCCGAGGAGCCCTCGCCGCCG GCCTCATCGTCGGATGGGACTGGGAGCGGCGGCGGCGGCGGCGAAAACTCCGTGGAGGAG GGCGACGGGGAAGGGCCCGGNTCCGGGTCCGGTACACCCACGGCGAAGCGGCAGCTCTTC GACGCTGACGGCTCCGCGTCGAGGCCCACCCGCCGCCGCCGCATCGCCTCCGACGACGAG ATTACTCAGGCTTTTACAGGTGAAACTACAAGTGAAAACACTTCCTCTACGAATGAAAGT AATCCTTTCATTGCAGTATTGGATAGTATGTGGTCTAAGAAGAGAGAGCTTGATGCTATA AAGGAGGCCGGGAAAGATGAGCGCCATGAAAAGTTATTGTCATTGCAAAAAGAGAGATTG GCACTAGAAAGACAGAAGTTAGAATACGAGAGGAATTTATTGGAATTCAAGAGAAACCAG CGGGATGAGAGAATTATGAACATGGACCTTAGTGATATGACTGGGCAACTAAGAGAATAC TACTTGAGGTTGCAGGGTGAGATCATGGCTCGACGATCAGGTTGAGCTGCACTACTTGTT GTGTTGATGGCCTGCTTATCGTATGAACTATCTGTCGTATGAGCTACTTGCTGTGTGAAC TATTTGTTATATGACCTATTTATTGCATGAACTCCTGTGATGCATGGACATATTTGTGAT GTATGAACTAAGCCTGAGTGCAAATTTTCTACTTCTAACGCATGCTTTCTACCATTTTGG AAAAACCTCTGTTGTTCAGTTGCAAGTAATCTAGCACTATCATAATTCGTTATATAATTA TTGGATCGCATGTATTCAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)