These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6765#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1697 fasta sequence [TCAAGGACATGGCCATTGCTATGCATTTCGAGCTCCGTGTCGTGAAATCTGACCGGAGCCGGTTCATCGCCAAGTGCGCGAGGGAAGGCTGCCCGTGGCGTGTGCATGTGGCAAAGTGCCATGGTGTCCCGACTTTCACTGTACGCACATTGCACGGGGAGCACACGTGCGACGGTGTGCGTGACTTGCATCATCACCAGGCTACCGTTGGTTGGGTTGCTAGGTCCGTTGAGGCAACGCTAAGAGATAACCCACAGTATAAGCCAAAAGAGATATTGCAGGATATCCGAGAGCAGCATGGAGTAGCAGTTTCTTATATGCAGGCATGGCGTGGGAAGGAGAGAAGCATGGCTGCTGTTCATGGCACCCTTGAGGATGGATATCGCTTTCTTCCTGCCTACTGTGAGCAGATTGTACAGACAAATCCTGGCAGTGTTGCAATATACAAAGGGACTGGACCAGATAATAGCTTCCAGCGGCTGTTCGTGTCGTTCCATGCATCTATTCATGGTTTCTTAAATGCATGTAGACCCCTTTTGGAAATTGACAAGGCAGACCTCAAGGGAAAGTATCTTGGGACATTGCTATGTGCGTCAGCTGTTGATGCTGAAAACATGATGTTCCCGCTAGCATTTGGTATTGTTGACGCTGAAAGTGATGAAAACTGGATGTGGTTTTTTTCAGAACTGAGGAAGATGCTTGGAGTTAACACGGATAAGATGCCTGTCTTGACGATACTATCTGAAAGGCAATCACAAGTGGTTGAAGCTGTTGAAGTAAACTTCCCCACTGCTTTTCATGGATTTTGCTTGAGATATGTGAGTGAGAATTTCCGTGACGAGTTCAAAAATCCTAAACTTCTGAACATTTTCTGGAGTGCTGTTTATGCTCTAACAGCAGCAGAATTTGATTCAAAGGTAAATGATATGGTCCAAGTTCAAGATGTCATGCCATGGTTCCAACGTTTCCCACCAAATCTCTGGGCAGTTTCTTACTTTGAGGGTATCCGATATGGCCATTTTAATCTTGGGATAACTGAGATATTATATAACTGGGCCATGGAGTGTCATGAGTTTCCTATAGTGCAAACTGTGGAGCATATCAAACACCAACTGACCTGCTGGTTTGTTGAACGGCAAAACTTGGCGCTATCATACAACTCAATTCTTGTTCCATCAGCCGAGAAACTTATTTCTGAAGCTATCGCTGATTCAGGATGCTATCAAGTCCTTCGAGCAAACAAGGTGGAGTTTGAAATAGTCTCATCTGAGCGAACAAACATTGTGGATACGCAAGCCAGGTGCTGCTCTTGTCGTCGGTGGCAAATATAT-GGCATTCCATGTGCACATGCTGTTGCTGCACTACTTTCCTGTGGTGAAGATCCTCGCTTGTATGCACATGAATGCTTCAGCATAATGAAGTATCGGGAAACTTACTCCCAGCCAATCTATTCAATTCCAGATAGAAGCCAATGGAACCTCCCGTTTTCTTTTGCACAAGGTGCAGGAAGCAAAGCATATGCGGTTCTTCGCCCGCCCAAGATCCGGAGGCCTCCTGGTCGTCCCAAAATGAAGATTCTTAAGATAGAAAGCTTGAAACGGCCAAAACGAATCGTTCAATGTGGCCGATGTCATCTTCTTGGACATTCTCAAAAGAAGTGTTCGTTACGAAACTGACATTAGATTATTGCTATCATA] [+] EMBL AK071288 [TCAAGGACATGGCCATTGCTATGCATTTCGAGCTCCGTGTCGTGAAATCTGACCGGAGCCGGTTCATCGCCAAGTGCGCGAGGGAAGGCTGCCCGTGGCGTGTGCATGTGGCAAAGTGCCATGGTGTCCCGACTTTCACTGTACGCACATTGCACGGGGAGCACACGTGCGACGGTGTGCGTGACTTGCATCATCACCAGGCTACCGTTGGTTGGGTTGCTAGGTCCGTTGAGGCAACGCTAAGAGATAACCCACAGTATAAGCCAAAAGAGATATTGCAGGATATCCGAGAGCAGCATGGAGTAGCAGTTTCTTATATGCAGGCATGGCGTGGGAAGGAGAGAAGCATGGCTGCTGTTCATGGCACCCTTGAGGATGGATATCGCTTTCTTCCTGCCTACTGTGAGCAGATTGTACAGACAAATCCTGGCAGTGTTGCAATATACAAAGGGACTGGACCAGATAATAGCTTCCAGCGGCTGTTCGTGTCGTTCCATGCATCTATTCATGGTTTCTTAAATGCATGTAGACCCCTTTTGGAAATTGACAAGGCAGACCTCAAGGGAAAGTATCTTGGGACATTGCTATGTGCGTCAGCTGTTGATGCTGAAAACATGATGTTCCCGCTAGCATTTGGTATTGTTGACGCTGAAAGTGATGAAAACTGGATGTGGTTTTTTTCAGAACTGAGGAAGATGCTTGGAGTTAACACGGATAAGATGCCTGTCTTGACGATACTATCTGAAAGGCAATCACAAGTGGTTGAAGCTGTTGAAGTAAACTTCCCCACTGCTTTTCATGGATTTTGCTTGAGATATGTGAGTGAGAATTTCCGTGACGAGTTCAAAAATCCTAAACTTCTGAACATTTTCTGGAGTGCTGTTTATGCTCTAACAGCAGCAGAATTTGATTCAAAGGTAAATGATATGGTCCAAGTTCAAGATGTCATGCCATGGTTCCAACGTTTCCCACCAAATCTCTGGGCAGTTTCTTACTTTGAGGGTATCCGATATGGCCATTTTAATCTTGGGATAACTGAGATATTATATAACTGGGCCATGGAGTGTCATGAGTTTCCTATAGTGCAAACTGTGGAGCATATCAAACACCAACTGACCTGCTGGTTTGTTGAACGGCAAAACTTGGCGCTATCATACAACTCAATTCTTGTTCCATCAGCCGAGAAACTTATTTCTGAAGCTATCGCTGATTCAGGATGCTATCAAGTCCTTCGAGCAAACAAGGTGGAGTTTGAAATAGTCTCATCTGAGCGAACAAACATTGTGGATACGCAAGCCAGGTGCTGCTCTTGTCGTCGGTGGCAAATATAT GGCATTCCATGTGCACATGCTGTTGCTGCACTACTTTCCTGTGGTGAAGATCCTCGCTTGTATGCACATGAATGCTTCAGCATAATGAAGTATCGGGAAACTTACTCCCAGCCAATCTATTCAATTCCAGATAGAAGCCAATGGAACCTCCCGTTTTCTTTTGCACAAGGTGCAGGAAGCAAAGCATATGCGGTTCTTCGCCCGCCCAAGATCCGGAGGCCTCCTGGTCGTCCCAAAATGAAGATTCTTAAGATAGAAAGCTTGAAACGGCCAAAACGAATCGTTCAATGTGGCCGATGTCATCTTCTTGGACATTCTCAAAAGAAGTGTTCGTTACGAAACTGACATTAGATTATTGCTATCATA] [+] EMBL CB000558 [ AGCTGTTGAAGCTGAAAACATGATGTTCCCGCTAGCACTTGGTATTGTTGACGCTGAAAGTGATGAAAACTGGATGTGGTTTTTTTCCGAACTGAGGAAGATGCTTGGAGTTAACACGGATAAGATGCCTGTCTTGACGATACTATCTGAAAGGCAATCACAAGTGGTTGAAGCTGTTGAAGTAAACTTCCCCACTGCTTTTCATGGATTTTGCTTGAGATATGTGAGTGAGAATTTCCGTGACGAGTTCAAAAATCCTAAACTTCTGAACATTTTCTGGAGTGCTGTTTATGCTCTAACAGCAGCAGAATTTGATTCAAAGGTAAATGATATGGTCCAAGTTCAAGATGTCATGCCATGGTTCCAACGTTTCCCACCAAATCTCTGGGCAGTTTCTTACTTTGAGGGTATCCGATATGGCCATTTTAATCTTGGGATAACTGAGATATTATATAACTGGGCCATGG ] [+] EMBL OSC23102 [ GTTTCTTACTTTGAGGGTATCCGATATGGCCATTTTAATCTTGGGATAACTGAGATATTATATAACTGGGCCATGGAGTGTCATGAGTTTCCTATAGTGCAAACTGTGGAGCATATCAAACACCAACTGACCTGCTGGTTTGTTGAACGGCAAAACTTGGCGCTATCATACAACTCAATTCTTGTTCCATCAGCCGAGAAACTTATTTCTGAAGCTATCGCTGATTCAGGATGCTATCAAGTCCTTCGAGCAAACAAGGTGGAGTTTGAAATAGTCTCATCTGAGCGAACAAACATTGTGGATACGCAAGCCAGGTGCTGCTCTTGTCGTCGGTGGCAAATATAT GGCATTCCATGTGCACATGCTGTTGCTGCACTACTTTCCTGTGGTGAAGATCC ] [+] EMBL OSC24821 [ GTTTCTTACTTTGAGGGTATCCGATATGGCCATTTTAATCTTGGGATAACTGAGATATTATATAACTGGGCCATGGAGTGTCATGAGTTTCCTATAGTGCAAACTGTGGAGCATATCAAACACCAACTGACCTGCTGGTTTGTTGAACGGCAAAACTTGGCGCTATCATACAACTCAATTCTTGTTCCATCAGCCGAGAAACTTATTTCTGAAGCTATCGCTGATTCAGGATGCTATCAAGTCCTTCGAGCAAACAAGGTGGAGTTTGAAATAGTCTCATCTGAGCGAACAAACATTGTGGATACGCAAGCCAGGTGCTGCTCTTGTCGTCGGTGGCAAATATATGGGCATTNCATGTGCACATGCTGTTGCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||