cluster # 6772

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Oryza sativa
cluster # 6772 cluster # 6772 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6772#0 length = 422 sequences # 4

consensusID : consensus_6772#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 422
fasta sequence

                              [CCCTCTTTTGTGGCGTAATAGAAAGAAAATCTCCCGTCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGCGGCGATCTCCATCGGGCGAGCAGAGCAGGGGATAGGAT-CATGATGTTTGACGATCAAGACCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTTGGTCATGGCATACCACTTTGTGATGGCAGACGTGAAGTATGAAGGGAACTAGTGTGGTTGAAGCGAAGGNATGATAAGGATCCATGGATCCATTTTGGCACATTACTTGTTAGATTATGCTAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATCTTGGGAGTGTCACCTGATTTGCACTGATGGATGTGGTACTTATAGCATTTCGACTT-CCGTAATTGTTTAATTAGCTACCAA]

[+] EMBL AU063092             [CCCTCTTTTGTGGCGTAATAGAAAGAAAATCTCCCGTCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGCGGCGATCTCCATCGGGCGAGCAGA NAGGGGATAGGAT CATGATGTTTGACGATCAAGACCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTTGGTCATGGCATACCACTTTGTGATGGCAGACGTGAAGTATGAAGGGAACTAGTGTGGTTGAAGCGAA GNATGATAAGGATCCATGGATCATTTTTGGCACATTACTTGTTAGATTATGCTAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATCTTGGGAGTGTCACCTGATTTGCACTNATGGATGTGGTACTTATAGCATTTCGACTTCCCGTAATTGTTTA            ]
[+] EMBL C74370               [                                                GCCAAGACGAGTCGCGGCTGAACAGGGCGGCGATCTCCATCGGGCGAGCAGAGCAGGGGATAGGAT CATGATGTTTGACGATCAAGACCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTTGGTCATGGCATACCACTTTGTGATGGCAGACGTGAAGTATGAAGGGAACTAGTGTGGTTGAAGCGAAGGCATGATAAGGATCCATGGATCCATTTTGGCACATTACTTGTTAGATTATGCTAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATC TGGGAGTNTCA CTGATTTGCACTGATGGATGTGGTACTTATAGCATTTCGACTT CCGTAATTGTTTAATTAGCTACCAA]
[+] EMBL C73963               [                                                     GACGAGTCGCGGCTGAACAGGGCGGCGATCTCCATCGGGCGAGCAGAGCAGGGNATAGGAT CATGATGTTTGACGATCAAGACCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTTGGTCATGGCATACCACTTTGTGATGGCAGACGTGAAGTATGAAGGGAACTAGTGTGGTTGAAGCGAAGGCATGATAAGGATCCATGGATCCATTTTGGCACATTACTTGTTAGATTATNCTAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATCTGGTGNGTGTCACCTGATTTGCACTGATGGATGTGGTACTTATAGCATTTCGA                             ]
[+] EMBL AU029261             [                                                                                                 AGAGCAGGGGATAGGNTCCATGATGTTTGACGATCAAGNCCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTTGGTCATGGCATACCACTTTGTGATGGNAGACGTGAAGTATGAAGGGAACTAGTGTGGTTGAAGCGAAGGNATGATAAGGATCCATGGATCCATTTTGGCNCATTACTTGTTAGATTATGCTAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATC TGGGAGTGTCAACTGATTTGCACTGATGGATGTGGTACTTATAGCATTTCGACTT CCGTAATTGTTTAATTAGCTACCAA]




>consensus_6772#0
CCCTCTTTTGTGGCGTAATAGAAAGAAAATCTCCCGTCTCCTTGCGCCGCCAAGACGAGT
CGCGGCTGAACAGGGCGGCGATCTCCATCGGGCGAGCAGAGCAGGGGATAGGATCATGAT
GTTTGACGATCAAGACCTGGGTTTCTTTGCCAATTTCCTGGGAATCTTCATATTTGTTTT
GGTCATGGCATACCACTTTGTGATGGCAGACGTGAAGTATGAAGGGAACTAGTGTGGTTG
AAGCGAAGGNATGATAAGGATCCATGGATCCATTTTGGCACATTACTTGTTAGATTATGC
TAGAGATTGCTAAGCATTTGTTGAAAGTTTACCATGAAATCTTGGGAGTGTCACCTGATT
TGCACTGATGGATGTGGTACTTATAGCATTTCGACTTCCGTAATTGTTTAATTAGCTACC
AA

clustalw multiple alignements is not computed in this case