cluster # 6780

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Oryza sativa
cluster # 6780 cluster # 6780 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6780#0 length = 1421 sequences # 4
consensusID : consensus_6780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1421
fasta sequence
                              [CAACCGCATTACACTTGGTTAATTAATTAATTCTCCATTAGCAGCTAGCTAGGGTTCTAGGGTTAATTTAGTTGATCAGTTCGCCGGAACCGGAGAAGAAGAAGAAGATGATAGGGTGGGGAGACGTGTACAAGGTGGTGGCGGCGACGGTGCCGCTCTACTTCGCGCTGTTCCTGGGCTACGGGTCGGTGAGGTGGTGGCGGATCTTCACGAGGGAGCAGTGCGACGCCGTGAACCGGCTCGTCGCCTTCTTCGCGCTCCCCTTCTTCACCTTCGAGTTCACCCTCCACACCGACCCGTTCCAGGTGAACTACCGCGCCGTCGCCGCCGACGTGATCTCGAAGGCGGTCATCGTCGCCGTCATCGGCGCCTGGGCGCGGTTCATGAGCAAGGGCGGCTGCGCCGTGAGCTGGTCCATCACCAGCTTCTCGCTGTCCACGCTCACCAACTCGCTTGTCGTCGGCGTGCCCATGGCGCGCGCCATGTACGGCGAGTGGGCGCAGCAGCTCGTCGTCCAGCTCTCCGTCTTCCAGGCCATTGTCTGGCTCACGCTGCTGCTCTTCGTGCTCGAGGTCAGGAAGGTCGCCATCGGGATGTACGTCGACGGCGCCGAGGCGGCGGCGGCGGCCGGCAAGGACGTCGAGGCCGCCGGCGCCGCCGCCGCCGCAGGCACGGTCGTCGTCGCCGCCGCCGCGGGCAAGCCGTCGCTGTGGGCGCTGGTGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCCAGCTTCGTCGGCATCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGCGCCTTCGAGGGATCGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGCATGGGATTGTTCATGGCGCAG-CAGGAGAAGATCA-TCGCGTGCGGGACGAGCTTTGCGGCGCTGGGGCTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCCGTCGGCCTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACATCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATTTTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGACGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAAACATACATACTGACAACAAATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAAAACTGTAATGGGAGTATCGAGTTCTATGGAATACTTTTAACACGTTATGTAACAAGAATGTATACTTATTCTGTTATTCAAAAGAATGTGTTACAGTAAAAAAAAGGA]

[+] EMBL AK066552             [CAACCGCATTACACTTGGTTAATTAATTAATTCTCCATTAGCAGCTAGCTAGGGTTCTAGGGTTAATTTAGTTGATCAGTTCGCCGGAACCGGAGAAGAAGAAGAAGATGATAGGGTGGGGAGACGTGTACAAGGTGGTGGCGGCGACGGTGCCGCTCTACTTCGCGCTGTTCCTGGGCTACGGGTCGGTGAGGTGGTGGCGGATCTTCACGAGGGAGCAGTGCGACGCCGTGAACCGGCTCGTCGCCTTCTTCGCGCTCCCCTTCTTCACCTTCGAGTTCACCCTCCACACCGACCCGTTCCAGGTGAACTACCGCGCCGTCGCCGCCGACGTGATCTCGAAGGCGGTCATCGTCGCCGTCATCGGCGCCTGGGCGCGGTTCATGAGCAAGGGCGGCTGCGCCGTGAGCTGGTCCATCACCAGCTTCTCGCTGTCCACGCTCACCAACTCGCTTGTCGTCGGCGTGCCCATGGCGCGCGCCATGTACGGCGAGTGGGCGCAGCAGCTCGTCGTCCAGCTCTCCGTCTTCCAGGCCATTGTCTGGCTCACGCTGCTGCTCTTCGTGCTCGAGGTCAGGAAGGTCGCCATCGGGATGTACGTCGACGGCGCCGAGGCGGCGGCGGCGGCCGGCAAGGACGTCGAGGCCGCCGGCGCCGCCGCCGCCGCAGGCACGGTCGTCGTCGCCGCCGCCGCGGGCAAGCCGTCGCTGTGGGCGCTGGTGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCCAGCTTCGTCGGCATCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGCGCCTTCGAGGGATCGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGCATGGGATTGTTCATGGCGCAG CAGGAGAAGATCA TCGCGTGCGGGACGAGCTTTGCGGCGCTGGGGCTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCGTGGCCATCGGCTCCATCGCCGTCGGCCTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACATCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATTTTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGACGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAAACATACATACTGACAACAAATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAAAACTGTAATGGGAGTATCGAGTTCTATGGAATACTTTTAACACGTTATGTAACAAGAATGTATACTTATTCTGTTATTCAAAAGAAT                     ]
[-] EMBL CB681313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGGGCAAGCCGTCGCTGTGGGCGCTGGTGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCCAGCTTCGTCGGCATCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGCGCCTTCGAGGGATCGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGCATGGGATTGTTCATGGCGCAG CAGGAGAAGATCA TCGCGTGCGGGACGAGCTTTGCGGCGCTGGGGCTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCCGTCGGCCTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACATCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATTTTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGACGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAAACATACATACTGACAACAAATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAAAACTGTAATGGGAGTATCGAGTTCTATGGAATACTTTTAACACGTTATTTAACAAGAATGTATACTTATTCTGTTATTCAAAAGAATGTGTTACAGTAAAAAAAAGGA]
[+] EMBL BI812872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACATCGCCTT CCGAGCGCCTTCGAGGAATC GT CTGATCATGTCCAAGTCAGGCACAGGAAT GCCATGTTCAGCATGGGATTGTTCATGGCGCAGCCAGGAGAAGATCATTCGCGTGCGGGACGAGCTTTGCGGCGCTGGGGCTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCCGTCGGCCTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACATCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATTTTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGACGCAGAGCC ATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCC AAACATACATACTGACAAC AATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAAAACTGTAATGGGAGTATTGAGTTCTATGGAATACTTTTAACACGTTATGTAACAAGAATGTATACTTATTCTGTTATTCAAAAGAATGTGTTACAGTAAAAA      ]
[-] EMBL CB681261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCAGCCCTACCTCAATCCATCACATCATTCATATTGGGGAAAGAATACGGGGCGCATGCTGATGTGATCAGTACTGCGGTGATTTTTGGAATGCTTGTCTCCATACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGACGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAAACATACATACTGGCAACAAATGTTGCAAAATATCTCCGGCCAACATTCGTCGGTGCATAAAACTGTAATGGGAGTATCGAGTTCTATGGAATACTTTTAACACct                                                               ]




>consensus_6780#0
CAACCGCATTACACTTGGTTAATTAATTAATTCTCCATTAGCAGCTAGCTAGGGTTCTAG
GGTTAATTTAGTTGATCAGTTCGCCGGAACCGGAGAAGAAGAAGAAGATGATAGGGTGGG
GAGACGTGTACAAGGTGGTGGCGGCGACGGTGCCGCTCTACTTCGCGCTGTTCCTGGGCT
ACGGGTCGGTGAGGTGGTGGCGGATCTTCACGAGGGAGCAGTGCGACGCCGTGAACCGGC
TCGTCGCCTTCTTCGCGCTCCCCTTCTTCACCTTCGAGTTCACCCTCCACACCGACCCGT
TCCAGGTGAACTACCGCGCCGTCGCCGCCGACGTGATCTCGAAGGCGGTCATCGTCGCCG
TCATCGGCGCCTGGGCGCGGTTCATGAGCAAGGGCGGCTGCGCCGTGAGCTGGTCCATCA
CCAGCTTCTCGCTGTCCACGCTCACCAACTCGCTTGTCGTCGGCGTGCCCATGGCGCGCG
CCATGTACGGCGAGTGGGCGCAGCAGCTCGTCGTCCAGCTCTCCGTCTTCCAGGCCATTG
TCTGGCTCACGCTGCTGCTCTTCGTGCTCGAGGTCAGGAAGGTCGCCATCGGGATGTACG
TCGACGGCGCCGAGGCGGCGGCGGCGGCCGGCAAGGACGTCGAGGCCGCCGGCGCCGCCG
CCGCCGCAGGCACGGTCGTCGTCGCCGCCGCCGCGGGCAAGCCGTCGCTGTGGGCGCTGG
TGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCCAGCTTCGTCGGCA
TCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGCGCCTTCGAGGGAT
CGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGCATGGGATTGTTCA
TGGCGCAGCAGGAGAAGATCATCGCGTGCGGGACGAGCTTTGCGGCGCTGGGGCTGGTGC
TAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCCGTCGGCCTCCGCG
GCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACATCATTCA
TATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATTTTTGGAA
TGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATTAGGTAGA
CGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAAACATACA
TACTGACAACAAATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAAAACTGTA
ATGGGAGTATCGAGTTCTATGGAATACTTTTAACACGTTATGTAACAAGAATGTATACTT
ATTCTGTTATTCAAAAGAATGTGTTACAGTAAAAAAAAGGA
clustalw multiple alignements is not computed in this case